PDB 5NKM
X-RAY DIFFRACTION2.49 Å0 chains9 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
1 domainChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainAll Domains (9)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e5nkmA1 | A:333-355,A:381-420 | Smg8_Smg9 | 621 → 621.1 → 621.1.1 |
| 2 | A | e5nkmA2 | A:1-254,A:289-332 | Smg8_Smg9 | 2004 → 2004.1 → 2004.1.1 |
| 3 | B | e5nkmB1 | B:59-284,B:305-364 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 4 | C | e5nkmC1 | C:1-254,C:289-332 | Smg8_Smg9 | 2004 → 2004.1 → 2004.1.1 |
| 5 | C | e5nkmC2 | C:333-420 | Smg8_Smg9 | 621 → 621.1 → 621.1.1 |
| 6 | D | e5nkmD1 | D:59-284,D:305-363 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 7 | E | e5nkmE1 | E:333-355,E:380-419 | Smg8_Smg9 | 621 → 621.1 → 621.1.1 |
| 8 | E | e5nkmE2 | E:1-254,E:289-332 | Smg8_Smg9 | 2004 → 2004.1 → 2004.1.1 |
| 9 | F | e5nkmF1 | F:59-283,F:306-363 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors