PDB 5NPK
X-RAY DIFFRACTION1.98 Å0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
All Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | b | e5npkb3 | b:1144-1327 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 2 | b | e5npkb4 | b:1328-1490 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 3 | b | e5npkb2 | b:417-637 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
| 4 | b | e5npkb5 | b:638-1143 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
| 5 | B | e5npkB1 | B:1144-1327 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 6 | B | e5npkB2 | B:1328-1491 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 7 | B | e5npkB3 | B:638-1143 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
| 8 | B | e5npkB4 | B:417-637 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
| 9 | d | e5npkd3 | d:1328-1491 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 10 | d | e5npkd4 | d:1144-1327 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 11 | d | e5npkd1 | d:638-1143 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
| 12 | d | e5npkd2 | d:417-637 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
| 13 | D | e5npkD1 | D:1328-1491 | DNA_topoisoIV | 4016 → 4016.1 → 4016.1.1 |
| 14 | D | e5npkD2 | D:1144-1327 | DNA_topoisoIV | 4014 → 4014.1 → 4014.1.1 |
| 15 | D | e5npkD3 | D:417-637 | DNA_gyraseB_C,Toprim | 2006 → 2006.1 → 2006.1.3 |
| 16 | D | e5npkD4 | D:638-1143 | DNA_topoisoIV | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors