ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 5VQB

X-RAY DIFFRACTION3.39 Å0 chains9 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain Aview chain

3 domains

e5vqbA1(A:381-474)e5vqbA2(A:1-165,A:264-380)e5vqbA3(A:166-263)

Chain Bview chain

3 domains

e5vqbB1(B:381-474)e5vqbB2(B:1-165,B:264-380)e5vqbB3(B:166-263)

Chain Cview chain

3 domains

e5vqbC1(C:166-263)e5vqbC2(C:1-165,C:264-380)e5vqbC3(C:381-474)

All Domains (9)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5vqbA1	A:381-474	Rng_hyd_C	2485 → 2485.1 → 2485.1.1
2	A	e5vqbA2	A:1-165,A:264-380	FAD_binding_3,NAD_binding_8	2003 → 2003.1 → 2003.1.2
3	A	e5vqbA3	A:166-263	FAD_binding_3	244 → 244.1 → 244.1.1
4	B	e5vqbB1	B:381-474	Rng_hyd_C	2485 → 2485.1 → 2485.1.1
5	B	e5vqbB2	B:1-165,B:264-380	FAD_binding_3,NAD_binding_8	2003 → 2003.1 → 2003.1.2
6	B	e5vqbB3	B:166-263	FAD_binding_3	244 → 244.1 → 244.1.1
7	C	e5vqbC1	C:166-263	FAD_binding_3	244 → 244.1 → 244.1.1
8	C	e5vqbC2	C:1-165,C:264-380	FAD_binding_3,NAD_binding_8	2003 → 2003.1 → 2003.1.2
9	C	e5vqbC3	C:381-474	Rng_hyd_C	2485 → 2485.1 → 2485.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors