Home/PDB

PDB 5VSW

X-RAY DIFFRACTION4.30 Å0 chains55 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (55)

#ChainDomain IDRangeFamilyClassification
1Ae5vswA1A:237-325RNA_pol_A_CTD102 → 102.1 → 102.1.1
2Ae5vswA2A:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
3Ae5vswA3A:7-52,A:179-236RNA_pol_L305 → 305.1 → 305.1.1
4Be5vswB1B:6-52,B:179-236RNA_pol_L305 → 305.1 → 305.1.1
5Be5vswB2B:237-325RNA_pol_A_CTD102 → 102.1 → 102.1.1
6Be5vswB3B:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
7Ce5vswC1C:153-226,C:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
8Ce5vswC2C:578-714RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
9Ce5vswC3C:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
10Ce5vswC4C:3-152,C:450-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
11Ce5vswC5C:791-828,C:1058-1237RNA_pol_Rpb2_61 → 1.1 → 1.1.2
12Ce5vswC6C:227-234,C:289-342275.1.1.0275 → 275.1 → 275.1.1
13Ce5vswC7C:1238-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
14Ce5vswC8C:939-10573681.1.1.03681 → 3681.1 → 3681.1.1
15Ce5vswC9C:235-288275.1.1.0275 → 275.1 → 275.1.1
16Ce5vswC10C:828-938RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
17De5vswD1D:1152-1215325.1.7.0325 → 325.1 → 325.1.7
18De5vswD2D:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
19De5vswD3D:334-377,D:418-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
20De5vswD4D:895-931,D:1135-1151,D:1216-1376RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
21De5vswD5D:811-894275.1.1.0275 → 275.1 → 275.1.1
22De5vswD6D:378-4174951.1.1.04951 → 4951.1 → 4951.1.1
23De5vswD7D:8-3334246.1.1.04246 → 4246.1 → 4246.1.1
24De5vswD8D:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
25Ee5vswE1E:2-90RNA_pol_Rpb6152 → 152.1 → 152.1.2
26Fe5vswF1F:448-501Sigma70_r3101 → 101.1 → 101.1.1
27Fe5vswF2F:94-167,F:213-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
28Fe5vswF3F:502-612Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
29Ge5vswG1G:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
30Ge5vswG2G:7-52,G:179-233RNA_pol_L305 → 305.1 → 305.1.1
31He5vswH1H:6-52,H:179-233RNA_pol_L305 → 305.1 → 305.1.1
32He5vswH2H:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
33Ie5vswI1I:939-10573681.1.1.03681 → 3681.1 → 3681.1.1
34Ie5vswI2I:828-938RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
35Ie5vswI3I:1238-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
36Ie5vswI4I:791-828,I:1058-1237RNA_pol_Rpb2_61 → 1.1 → 1.1.2
37Ie5vswI5I:3-152,I:450-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
38Ie5vswI6I:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
39Ie5vswI7I:578-714RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
40Ie5vswI8I:153-226,I:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
41Ie5vswI9I:227-234,I:289-342275.1.1.0275 → 275.1 → 275.1.1
42Ie5vswI10I:235-288275.1.1.0275 → 275.1 → 275.1.1
43Je5vswJ1J:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
44Je5vswJ2J:812-931RNA_pol_Rpb1_5275 → 275.1 → 275.1.1
45Je5vswJ3J:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
46Je5vswJ4J:16-3414246.1.1.04246 → 4246.1 → 4246.1.1
47Je5vswJ5J:639-811RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
48Je5vswJ6J:1137-1215325.1.7.0325 → 325.1 → 325.1.7
49Je5vswJ7J:1214-1375RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
50Ke5vswK1K:2-80RNA_pol_Rpb6152 → 152.1 → 152.1.2
51Le5vswL1L:508-613Sigma70_r4101 → 101.1 → 101.1.1
52Le5vswL2L:94-167,L:213-446Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
53Le5vswL3L:447-507Sigma70_r3101 → 101.1 → 101.1.1
54Me5vswM1M:111-151zf-dskA_traR377 → 377.1 → 377.1.1
55Me5vswM2M:12-110DksA_N192 → 192.10 → 192.10.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors