PDB 5YZG
ELECTRON MICROSCOPY0 chains78 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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15 domainse5yzgD1(D:2015-2125)e5yzgD2(D:250-363)e5yzgD3(D:364-365,D:404-458)e5yzgD4(D:107-179)e5yzgD5(D:1824-1955)e5yzgD6(D:1125-1181)e5yzgD7(D:1182-1294)e5yzgD8(D:1521-1723)e5yzgD9(D:1956-2014)e5yzgD10(D:1295-1520)e5yzgD11(D:1724-1823)e5yzgD12(D:459-682)e5yzgD13(D:889-992)e5yzgD14(D:683-888)e5yzgD15(D:993-1124)
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3 domainsChain pview chain
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1 domainAll Domains (78)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e5yzg11 | 1:138-301 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 2 | 1 | e5yzg12 | 1:5-83 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 3 | 2 | e5yzg21 | 2:489-646 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 4 | 2 | e5yzg22 | 2:102-433 | WD40 | 5 → 5.1 → 5.1.5 |
| 5 | 3 | e5yzg31 | 3:6-177 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 6 | a | e5yzga1 | a:3-79 | LSM | 4 → 4.1 → 4.1.1 |
| 7 | A | e5yzgA1 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 8 | A | e5yzgA2 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 9 | A | e5yzgA3 | A:2067-2314 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 10 | A | e5yzgA4 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 11 | A | e5yzgA5 | A:1755-2015 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 12 | A | e5yzgA6 | A:25-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 13 | b | e5yzgb1 | b:7-89 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | c | e5yzgc1 | c:1-81 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | C | e5yzgC1 | C:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 16 | C | e5yzgC2 | C:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 17 | C | e5yzgC3 | C:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 18 | C | e5yzgC4 | C:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 19 | C | e5yzgC5 | C:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 20 | d | e5yzgd1 | d:20-116 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | D | e5yzgD1 | D:2015-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 22 | D | e5yzgD2 | D:250-363 | Helicase_PWI | 592 → 592.1 → 592.1.1 |
| 23 | D | e5yzgD3 | D:364-365,D:404-458 | 1029.1.1.0 | 1029 → 1029.1 → 1029.1.1 |
| 24 | D | e5yzgD4 | D:107-179 | BRR2_plug | 592 → 592.6 → 592.6.1 |
| 25 | D | e5yzgD5 | D:1824-1955 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 26 | D | e5yzgD6 | D:1125-1181 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 27 | D | e5yzgD7 | D:1182-1294 | Sec63 | 11 → 11.1 → 11.1.1 |
| 28 | D | e5yzgD8 | D:1521-1723 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 29 | D | e5yzgD9 | D:1956-2014 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 30 | D | e5yzgD10 | D:1295-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 31 | D | e5yzgD11 | D:1724-1823 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 32 | D | e5yzgD12 | D:459-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 33 | D | e5yzgD13 | D:889-992 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 34 | D | e5yzgD14 | D:683-888 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 35 | D | e5yzgD15 | D:993-1124 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 36 | e | e5yzge1 | e:14-92 | LSM | 4 → 4.1 → 4.1.1 |
| 37 | E | e5yzgE1 | E:58-356 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 38 | f | e5yzgf1 | f:2-75 | LSM | 4 → 4.1 → 4.1.1 |
| 39 | g | e5yzgg1 | g:3-76 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | h | e5yzgh1 | h:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 41 | i | e5yzgi1 | i:4-89 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | I | e5yzgI1 | I:156-819 | TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 43 | j | e5yzgj1 | j:1-82 | LSM | 4 → 4.1 → 4.1.1 |
| 44 | J | e5yzgJ1 | J:179-802 | HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376 | 109 → 109.4 → 109.4.1 |
| 45 | k | e5yzgk1 | k:20-116 | LSM | 4 → 4.1 → 4.1.1 |
| 46 | l | e5yzgl1 | l:14-92 | LSM | 4 → 4.1 → 4.1.1 |
| 47 | L | e5yzgL1 | L:8-64 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 48 | L | e5yzgL2 | L:62-110 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 49 | m | e5yzgm1 | m:2-75 | LSM | 4 → 4.1 → 4.1.1 |
| 50 | n | e5yzgn1 | n:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | N | e5yzgN1 | N:1-143 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 52 | o | e5yzgo1 | o:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 53 | O | e5yzgO1 | O:90-220 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 54 | O | e5yzgO2 | O:221-303 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 55 | O | e5yzgO3 | O:19-89 | STL11_N | 376 → 376.1 → 376.1.3 |
| 56 | p | e5yzgp1 | p:3-96 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 57 | q | e5yzgq1 | q:68-134,q:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 58 | Q | e5yzgQ1 | Q:1135-1381 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 59 | Q | e5yzgQ2 | Q:707-753,Q:773-794 | Aquarius_N_3rd | 3940 → 3940.1 → 3940.1.1 |
| 60 | Q | e5yzgQ3 | Q:19-415 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 61 | Q | e5yzgQ4 | Q:493-659 | Aquarius_N_2nd | 1 → 1.1 → 1.1.7 |
| 62 | Q | e5yzgQ5 | Q:416-492,Q:660-706,Q:795-1134 | ResIII, AAA_11 | 2004 → 2004.1 → 2004.1.1 |
| 63 | r | e5yzgr1 | r:68-134,r:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 64 | s | e5yzgs1 | s:68-134,s:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 65 | S | e5yzgS1 | S:8-166 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 66 | t | e5yzgt1 | t:68-134,t:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 67 | T | e5yzgT1 | T:184-496 | WD40 | 5 → 5.1 → 5.1.4 |
| 68 | u | e5yzgu1 | u:22-242 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 69 | u | e5yzgu2 | u:243-411 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 70 | v | e5yzgv1 | v:5-148 | Mago_nashi | 861 → 861.1 → 861.1.1 |
| 71 | V | e5yzgV1 | V:448-648 | MA3 | 109 → 109.4 → 109.4.1 |
| 72 | V | e5yzgV2 | V:149-406 | MIF4G | 109 → 109.4 → 109.4.1 |
| 73 | w | e5yzgw1 | w:64-154 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 74 | W | e5yzgW1 | W:273-579 | WD40 | 5 → 5.1 → 5.1.4 |
| 75 | Z | e5yzgZ1 | Z:1062-1152 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 76 | Z | e5yzgZ2 | Z:708-878 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 77 | Z | e5yzgZ3 | Z:914-1061 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 78 | Z | e5yzgZ4 | Z:471-707,Z:879-913 | DEAD | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors