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PDB 5YZG

ELECTRON MICROSCOPY0 chains78 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (78)

#ChainDomain IDRangeFamilyClassification
11e5yzg111:138-301Pro_isomerase75 → 75.1 → 75.1.1
21e5yzg121:5-83RRM_1304 → 304.9 → 304.9.1
32e5yzg212:489-646Pro_isomerase75 → 75.1 → 75.1.1
42e5yzg222:102-433WD405 → 5.1 → 5.1.5
53e5yzg313:6-177Pro_isomerase75 → 75.1 → 75.1.1
6ae5yzga1a:3-79LSM4 → 4.1 → 4.1.1
7Ae5yzgA1A:1503-1754U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
8Ae5yzgA2A:811-1182RRM_4304 → 304.48 → 304.48.1
9Ae5yzgA3A:2067-2314JAB,PROCT2492 → 2492.1 → 2492.1.1
10Ae5yzgA4A:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
11Ae5yzgA5A:1755-2015PRP8_domainIV2484 → 2484.1 → 2484.1.1
12Ae5yzgA6A:25-810PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
13be5yzgb1b:7-89LSM4 → 4.1 → 4.1.1
14ce5yzgc1c:1-81LSM4 → 4.1 → 4.1.1
15Ce5yzgC1C:829-957EFG_C304 → 304.24 → 304.24.1
16Ce5yzgC2C:581-659EFG_III304 → 304.24 → 304.24.1
17Ce5yzgC3C:660-828EFG_IV212 → 212.1 → 212.1.1
18Ce5yzgC4C:114-439GTP_EFTU2004 → 2004.1 → 2004.1.1
19Ce5yzgC5C:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
20de5yzgd1d:20-116LSM4 → 4.1 → 4.1.1
21De5yzgD1D:2015-2125Sec6311 → 11.1 → 11.1.1
22De5yzgD2D:250-363Helicase_PWI592 → 592.1 → 592.1.1
23De5yzgD3D:364-365,D:404-4581029.1.1.01029 → 1029.1 → 1029.1.1
24De5yzgD4D:107-179BRR2_plug592 → 592.6 → 592.6.1
25De5yzgD5D:1824-1955Sec634156 → 4156.1 → 4156.1.1
26De5yzgD6D:1125-1181102.5.1.0102 → 102.5 → 102.5.1
27De5yzgD7D:1182-1294Sec6311 → 11.1 → 11.1.1
28De5yzgD8D:1521-1723Helicase_C2004 → 2004.1 → 2004.1.1
29De5yzgD9D:1956-2014102.5.1.0102 → 102.5 → 102.5.1
30De5yzgD10D:1295-1520DEAD2004 → 2004.1 → 2004.1.1
31De5yzgD11D:1724-1823SNRNP200_wHTH101 → 101.1 → 101.1.2
32De5yzgD12D:459-682DEAD2004 → 2004.1 → 2004.1.1
33De5yzgD13D:889-992SNRNP200_wHTH101 → 101.1 → 101.1.2
34De5yzgD14D:683-888Helicase_C2004 → 2004.1 → 2004.1.1
35De5yzgD15D:993-1124Sec634156 → 4156.1 → 4156.1.1
36ee5yzge1e:14-92LSM4 → 4.1 → 4.1.1
37Ee5yzgE1E:58-356WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
38fe5yzgf1f:2-75LSM4 → 4.1 → 4.1.1
39ge5yzgg1g:3-76LSM4 → 4.1 → 4.1.1
40he5yzgh1h:4-85LSM4 → 4.1 → 4.1.1
41ie5yzgi1i:4-89LSM4 → 4.1 → 4.1.1
42Ie5yzgI1I:156-819TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_PRP39_N109 → 109.4 → 109.4.1
43je5yzgj1j:1-82LSM4 → 4.1 → 4.1.1
44Je5yzgJ1J:179-802HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376109 → 109.4 → 109.4.1
45ke5yzgk1k:20-116LSM4 → 4.1 → 4.1.1
46le5yzgl1l:14-92LSM4 → 4.1 → 4.1.1
47Le5yzgL1L:8-64Myb_DNA-binding101 → 101.1 → 101.1.1
48Le5yzgL2L:62-110Myb_DNA-binding101 → 101.1 → 101.1.1
49me5yzgm1m:2-75LSM4 → 4.1 → 4.1.1
50ne5yzgn1n:4-76LSM4 → 4.1 → 4.1.1
51Ne5yzgN1N:1-143BUD313952 → 3952.1 → 3952.1.1
52oe5yzgo1o:2-163LRR_9207 → 207.1 → 207.1.1
53Oe5yzgO1O:90-220zf-CCCH_RBM22906 → 906.1 → 906.1.1
54Oe5yzgO2O:221-303RRM_1304 → 304.9 → 304.9.1
55Oe5yzgO3O:19-89STL11_N376 → 376.1 → 376.1.3
56pe5yzgp1p:3-96RRM_1304 → 304.9 → 304.9.1
57qe5yzgq1q:68-134,q:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
58Qe5yzgQ1Q:1135-1381AAA_122004 → 2004.1 → 2004.1.1
59Qe5yzgQ2Q:707-753,Q:773-794Aquarius_N_3rd3940 → 3940.1 → 3940.1.1
60Qe5yzgQ3Q:19-415Aquarius_N_1st109 → 109.4 → 109.4.1
61Qe5yzgQ4Q:493-659Aquarius_N_2nd1 → 1.1 → 1.1.7
62Qe5yzgQ5Q:416-492,Q:660-706,Q:795-1134ResIII, AAA_112004 → 2004.1 → 2004.1.1
63re5yzgr1r:68-134,r:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
64se5yzgs1s:68-134,s:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
65Se5yzgS1S:8-166Pro_isomerase75 → 75.1 → 75.1.1
66te5yzgt1t:68-134,t:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
67Te5yzgT1T:184-496WD405 → 5.1 → 5.1.4
68ue5yzgu1u:22-242DEAD2004 → 2004.1 → 2004.1.1
69ue5yzgu2u:243-411Helicase_C2004 → 2004.1 → 2004.1.1
70ve5yzgv1v:5-148Mago_nashi861 → 861.1 → 861.1.1
71Ve5yzgV1V:448-648MA3109 → 109.4 → 109.4.1
72Ve5yzgV2V:149-406MIF4G109 → 109.4 → 109.4.1
73we5yzgw1w:64-154RRM_1304 → 304.9 → 304.9.1
74We5yzgW1W:273-579WD405 → 5.1 → 5.1.4
75Ze5yzgZ1Z:1062-1152OB_NTP_bind2 → 2.1 → 2.1.1
76Ze5yzgZ2Z:708-878Helicase_C2004 → 2004.1 → 2004.1.1
77Ze5yzgZ3Z:914-1061HA2_N,HA2_C4156 → 4156.1 → 4156.1.1
78Ze5yzgZ4Z:471-707,Z:879-913DEAD2004 → 2004.1 → 2004.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors