PDB 6QDV
ELECTRON MICROSCOPY0 chains74 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 7view chain
2 domainsChain 8view chain
1 domainChain 9view chain
1 domainChain Aview chain
6 domainsChain bview chain
1 domainChain Bview chain
12 domainsChain cview chain
2 domainsChain Cview chain
5 domainsChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain hview chain
1 domainChain Hview chain
2 domainsChain iview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
3 domainsChain nview chain
1 domainChain Nview chain
1 domainChain oview chain
1 domainChain Oview chain
2 domainsChain pview chain
1 domainChain qview chain
1 domainChain rview chain
1 domainChain Sview chain
1 domainChain tview chain
1 domainChain Tview chain
1 domainChain uview chain
1 domainChain Uview chain
5 domainsChain vview chain
1 domainChain Vview chain
6 domainsChain wview chain
1 domainChain Wview chain
1 domainChain Yview chain
1 domainAll Domains (74)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 7 | e6qdv71 | 7:22-242 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 2 | 7 | e6qdv72 | 7:243-411 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 3 | 8 | e6qdv81 | 8:64-154 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 4 | 9 | e6qdv91 | 9:5-148 | Mago_nashi | 861 → 861.1 → 861.1.1 |
| 5 | A | e6qdvA1 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 6 | A | e6qdvA2 | A:1755-2019 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 7 | A | e6qdvA3 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 8 | A | e6qdvA4 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 9 | A | e6qdvA5 | A:25-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 10 | A | e6qdvA6 | A:2067-2314 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 11 | b | e6qdvb1 | b:6-87 | LSM | 4 → 4.1 → 4.1.1 |
| 12 | B | e6qdvB1 | B:404-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 13 | B | e6qdvB2 | B:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 14 | B | e6qdvB3 | B:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 15 | B | e6qdvB4 | B:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 16 | B | e6qdvB5 | B:887-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 17 | B | e6qdvB6 | B:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 18 | B | e6qdvB7 | B:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 19 | B | e6qdvB8 | B:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 20 | B | e6qdvB9 | B:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 21 | B | e6qdvB10 | B:1521-1722 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 22 | B | e6qdvB11 | B:683-886 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 23 | B | e6qdvB12 | B:1723-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 24 | c | e6qdvc1 | c:62-196 | PF30379 | 396 → 396.3 → 396.3.1 |
| 25 | c | e6qdvc2 | c:265-371 | Slu7 | 7101 → 7101.1 → 7101.1.1 |
| 26 | C | e6qdvC1 | C:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 27 | C | e6qdvC2 | C:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 28 | C | e6qdvC3 | C:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 29 | C | e6qdvC4 | C:56-439 | GTP_EFTU,EFTUD2 | 2004 → 2004.1 → 2004.1.1 |
| 30 | C | e6qdvC5 | C:829-954 | EFG_C | 304 → 304.24 → 304.24.1 |
| 31 | d | e6qdvd1 | d:2-85 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | e | e6qdve1 | e:13-91 | LSM | 4 → 4.1 → 4.1.1 |
| 33 | f | e6qdvf1 | f:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | g | e6qdvg1 | g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 35 | h | e6qdvh1 | h:1-80 | LSM | 4 → 4.1 → 4.1.1 |
| 36 | H | e6qdvH1 | H:448-648 | MA3 | 109 → 109.4 → 109.4.1 |
| 37 | H | e6qdvH2 | H:149-406 | MIF4G | 109 → 109.4 → 109.4.1 |
| 38 | i | e6qdvi1 | i:3-166 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 39 | j | e6qdvj1 | j:13-115 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | J | e6qdvJ1 | J:185-504 | WD40 | 5 → 5.1 → 5.1.4 |
| 41 | k | e6qdvk1 | k:6-87 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | l | e6qdvl1 | l:1-80 | LSM | 4 → 4.1 → 4.1.1 |
| 43 | L | e6qdvL1 | L:1-144 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 44 | m | e6qdvm1 | m:13-115 | LSM | 4 → 4.1 → 4.1.1 |
| 45 | M | e6qdvM1 | M:90-220 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 46 | M | e6qdvM2 | M:221-306 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 47 | M | e6qdvM3 | M:18-89 | STL11_N | 376 → 376.1 → 376.1.3 |
| 48 | n | e6qdvn1 | n:2-84 | LSM | 4 → 4.1 → 4.1.1 |
| 49 | N | e6qdvN1 | N:52-357 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 50 | o | e6qdvo1 | o:67-579 | WD40 | 5 → 5.1 → 5.1.4 |
| 51 | O | e6qdvO1 | O:8-64 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 52 | O | e6qdvO2 | O:62-110 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 53 | p | e6qdvp1 | p:11-91 | LSM | 4 → 4.1 → 4.1.1 |
| 54 | q | e6qdvq1 | q:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 55 | r | e6qdvr1 | r:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 56 | S | e6qdvS1 | S:176-802 | HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376 | 109 → 109.4 → 109.4.1 |
| 57 | t | e6qdvt1 | t:68-134,t:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 58 | T | e6qdvT1 | T:19-30,T:33-749 | TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 59 | u | e6qdvu1 | u:68-134,u:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 60 | U | e6qdvU1 | U:19-415 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 61 | U | e6qdvU2 | U:1135-1381 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 62 | U | e6qdvU3 | U:416-492,U:660-706,U:795-1134 | ResIII, AAA_11 | 2004 → 2004.1 → 2004.1.1 |
| 63 | U | e6qdvU4 | U:493-659 | Aquarius_N_2nd | 1 → 1.1 → 1.1.7 |
| 64 | U | e6qdvU5 | U:707-753,U:773-794 | Aquarius_N_3rd | 3940 → 3940.1 → 3940.1.1 |
| 65 | v | e6qdvv1 | v:68-134,v:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 66 | V | e6qdvV1 | V:260-355,V:609-610,V:800-805 | S1 | 2 → 2.1 → 2.1.1 |
| 67 | V | e6qdvV2 | V:566-608,V:611-743 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 68 | V | e6qdvV3 | V:744-799,V:806-911,V:914-917 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 69 | V | e6qdvV4 | V:912-913,V:918-975,V:977-987 | HA2_N | 101 → 101.1 → 101.1.2 |
| 70 | V | e6qdvV5 | V:961-1108 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 71 | V | e6qdvV6 | V:1109-1183 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 72 | w | e6qdvw1 | w:68-134,w:195-504 | WD40, Prp19, WD40_Prp19 | 5 → 5.1 → 5.1.4 |
| 73 | W | e6qdvW1 | W:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 74 | Y | e6qdvY1 | Y:3-94 | RRM_1 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors