PDB 6VDK
ELECTRON MICROSCOPY0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
3 domainsChain Bview chain
3 domainsChain Cview chain
3 domainsChain Dview chain
3 domainsChain Iview chain
1 domainChain Jview chain
1 domainChain Mview chain
1 domainChain Pview chain
1 domainAll Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e6vdkA1 | A:49-213 | rve | 2484 → 2484.1 → 2484.1.1 |
| 2 | A | e6vdkA2 | A:1-48 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 3 | A | e6vdkA3 | A:214-270 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
| 4 | B | e6vdkB1 | B:1-48 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 5 | B | e6vdkB2 | B:214-270 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
| 6 | B | e6vdkB3 | B:49-213 | rve | 2484 → 2484.1 → 2484.1.1 |
| 7 | C | e6vdkC1 | C:1-48 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 8 | C | e6vdkC2 | C:49-213 | rve | 2484 → 2484.1 → 2484.1.1 |
| 9 | C | e6vdkC3 | C:214-270 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
| 10 | D | e6vdkD1 | D:49-213 | rve | 2484 → 2484.1 → 2484.1.1 |
| 11 | D | e6vdkD2 | D:2-48 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 12 | D | e6vdkD3 | D:214-270 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
| 13 | I | e6vdkI1 | I:221-276 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
| 14 | J | e6vdkJ1 | J:221-276 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
| 15 | M | e6vdkM1 | M:222-270 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
| 16 | P | e6vdkP1 | P:222-268 | IN_DBD_C | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors