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PDB 6VJS

X-RAY DIFFRACTION4.00 Å0 chains53 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (53)

#ChainDomain IDRangeFamilyClassification
1Ae6vjsA1A:1-52,A:174-234RNA_pol_L305 → 305.1 → 305.1.1
2Ae6vjsA2A:53-173RNA_pol_A_bac240 → 240.2 → 240.2.1
3Be6vjsB1B:6-52,B:179-236RNA_pol_L305 → 305.1 → 305.1.1
4Be6vjsB2B:237-317RNA_pol_A_CTD102 → 102.1 → 102.1.1
5Be6vjsB3B:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
6Ce6vjsC1C:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
7Ce6vjsC2C:1240-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
8Ce6vjsC3C:828-938,C:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
9Ce6vjsC4C:226-234,C:289-342275.1.1.0275 → 275.1 → 275.1.1
10Ce6vjsC5C:791-827,C:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
11Ce6vjsC6C:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
12Ce6vjsC7C:578-7124042.1.1.04042 → 4042.1 → 4042.1.1
13Ce6vjsC8C:235-288275.1.1.0275 → 275.1 → 275.1.1
14Ce6vjsC9C:2-151,C:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
15Ce6vjsC10C:152-225,C:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
16De6vjsD1D:895-931,D:1135-1151,D:1216-1375RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
17De6vjsD2D:378-4174951.1.1.04951 → 4951.1 → 4951.1.1
18De6vjsD3D:334-377,D:418-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
19De6vjsD4D:8-3334246.1.1.04246 → 4246.1 → 4246.1.1
20De6vjsD5D:811-894275.1.1.0275 → 275.1 → 275.1.1
21De6vjsD6D:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
22De6vjsD7D:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
23De6vjsD8D:1152-1215325.1.7.0325 → 325.1 → 325.1.7
24Ee6vjsE1E:2-91RNA_pol_Rpb6152 → 152.1 → 152.1.2
25Fe6vjsF1F:53-173RNA_pol_A_bac240 → 240.2 → 240.2.1
26Fe6vjsF2F:1-52,F:174-234RNA_pol_L305 → 305.1 → 305.1.1
27Ge6vjsG1G:6-52,G:174-234RNA_pol_L305 → 305.1 → 305.1.1
28Ge6vjsG2G:53-173RNA_pol_A_bac240 → 240.2 → 240.2.1
29He6vjsH1H:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
30He6vjsH2H:235-288275.1.1.0275 → 275.1 → 275.1.1
31He6vjsH3H:226-234,H:289-342275.1.1.0275 → 275.1 → 275.1.1
32He6vjsH4H:1240-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
33He6vjsH5H:828-938,H:1045-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
34He6vjsH6H:578-7124042.1.1.04042 → 4042.1 → 4042.1.1
35He6vjsH7H:152-225,H:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
36He6vjsH8H:939-10443681.1.1.03681 → 3681.1 → 3681.1.1
37He6vjsH9H:791-827,H:1063-1239RNA_pol_Rpb2_61 → 1.1 → 1.1.2
38He6vjsH10H:2-151,H:452-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
39Ie6vjsI1I:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
40Ie6vjsI2I:334-377,I:418-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
41Ie6vjsI3I:378-4174951.1.1.04951 → 4951.1 → 4951.1.1
42Ie6vjsI4I:895-931,I:1135-1151,I:1216-1375RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
43Ie6vjsI5I:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
44Ie6vjsI6I:1152-1215325.1.7.0325 → 325.1 → 325.1.7
45Ie6vjsI7I:8-3334246.1.1.04246 → 4246.1 → 4246.1.1
46Ie6vjsI8I:811-894275.1.1.0275 → 275.1 → 275.1.1
47Je6vjsJ1J:2-77RNA_pol_Rpb6152 → 152.1 → 152.1.2
48Xe6vjsX1X:480-609Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
49Xe6vjsX2X:448-479Sigma70_r3101 → 101.1 → 101.1.1
50Xe6vjsX3X:95-167,X:212-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1
51Ye6vjsY1Y:448-479Sigma70_r3101 → 101.1 → 101.1.1
52Ye6vjsY2Y:480-609Sigma70_r3,Sigma70_r4101 → 101.1 → 101.1.1
53Ye6vjsY3Y:95-167,Y:208-447Sigma70_r1_2,Sigma70_r2,Sigma70_ner142 → 142.1 → 142.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors