ECODEvolutionary Classification of Protein Domains

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PDB 8BB3

X-RAY DIFFRACTION1.80 Å0 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Bview chain

1 domain

e8bb3B1(B:32-334)

Chain Jview chain

1 domain

e8bb3J1(J:1-103)

Chain Kview chain

1 domain

e8bb3K1(K:17-112)

Chain Lview chain

2 domains

e8bb3L1(L:57-154)e8bb3L2(L:155-209)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	B	e8bb3B1	B:32-334	WD40, eIF2A, Beta-prop_WDR5	5 → 5.1 → 5.1.4
2	J	e8bb3J1	J:1-103	ubiquitin	221 → 221.1 → 221.1.1
3	K	e8bb3K1	K:17-112	Skp1_POZ	226 → 226.1 → 226.1.1
4	L	e8bb3L1	L:57-154	VHL	11 → 11.1 → 11.1.4
5	L	e8bb3L2	L:155-209	VHL_C	4215 → 4215.1 → 4215.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors