PDB 9J0O
0 chains45 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
7 domainsChain bview chain
1 domainChain Bview chain
7 domainsChain cview chain
1 domainChain Cview chain
2 domainsChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Yview chain
1 domainAll Domains (45)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e9j0oa1 | a:44-136 | Histone | 148 → 148.1 → 148.1.1 |
| 2 | A | e9j0oA1 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 3 | A | e9j0oA2 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 4 | A | e9j0oA3 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e9j0oA4 | A:1152-1308 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 6 | A | e9j0oA5 | A:364-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 7 | A | e9j0oA6 | A:1083-1135,A:1361-1415,A:1469-1484 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 8 | A | e9j0oA7 | A:1136-1151,A:1309-1360 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | b | e9j0ob1 | b:24-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 10 | B | e9j0oB1 | B:529-618 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 11 | B | e9j0oB2 | B:16-67,B:87-200,B:392-528 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 12 | B | e9j0oB3 | B:806-929 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 13 | B | e9j0oB4 | B:1054-1174 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 14 | B | e9j0oB5 | B:769-805,B:930-1053 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 15 | B | e9j0oB6 | B:619-768 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 16 | B | e9j0oB7 | B:201-391 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 17 | c | e9j0oc1 | c:14-119 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 18 | C | e9j0oC1 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 19 | C | e9j0oC2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 20 | d | e9j0od1 | d:32-126 | Histone | 148 → 148.1 → 148.1.1 |
| 21 | D | e9j0oD1 | D:14-142 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 22 | e | e9j0oe1 | e:44-136 | Histone | 148 → 148.1 → 148.1.1 |
| 23 | E | e9j0oE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 24 | E | e9j0oE2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 25 | f | e9j0of1 | f:24-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 26 | F | e9j0oF1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 27 | g | e9j0og1 | g:14-119 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 28 | G | e9j0oG1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 29 | G | e9j0oG2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 30 | h | e9j0oh1 | h:32-126 | Histone | 148 → 148.1 → 148.1.1 |
| 31 | H | e9j0oH1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 32 | I | e9j0oI1 | I:1-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 33 | I | e9j0oI2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 34 | J | e9j0oJ1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 35 | K | e9j0oK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 36 | L | e9j0oL1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 37 | Y | e9j0oY1 | Y:1-118 | Spt4 | 375 → 375.1 → 375.1.1 |
| 38 | Z | e9j0oZ1 | Z:179-271,Z:331-334 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 39 | Z | e9j0oZ2 | Z:272-330,Z:335-396 | KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 40 | Z | e9j0oZ3 | Z:462-535 | KOW | 4 → 4.1 → 4.1.1 |
| 41 | Z | e9j0oZ4 | Z:536-594 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
| 42 | Z | e9j0oZ5 | Z:595-647 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 43 | Z | e9j0oZ6 | Z:690-757 | KOW5_SPT5 | 148 → 148.1 → 148.1.3 |
| 44 | Z | e9j0oZ7 | Z:987-1046 | KOW6_SPT5 | 4 → 4.1 → 4.1.1 |
| 45 | Z | e9j0oZ8 | Z:1047-1087 | KOW7_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors