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P35956

Gag-Pol polyprotein [Cleaved into: Matrix protein p16; Capsid protein p25; Nucleocapsid protein p14; Protease (EC 3.4.23.-) (Retropepsin); Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4) (Exoribonuclease H) (EC 3.1.13.2); Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23); Integrase (IN) (EC 2.7.7.-) (EC 3.1.-.-)]

UniProt

Domain Architecture(108 domains)

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e3hphB1(B:1-44)e3hphC1(C:1-44)e5m0rA2(A:1-47)e5m0rI2(I:1-47)e5m0qC2(C:1-47)e5m0qE2(E:1-44)e5m0qK2(K:1-47)e5m0rC2(C:1-47)e5m0rE2(E:1-44)e5m0rK2(K:1-47)e5m0rM2(M:1-44)e3hpgF1(F:2-47)e3hpgE3(E:2-49)e3hpgD3(D:2-49)e5m0qA2(A:2-47)e5m0qI2(I:2-47)e5m0qM2(M:2-44)e3hphD1(D:3-43)e5m0qB1(B:3-44)e5m0qJ2(J:3-44)e5m0rB3(B:3-47)e5m0rJ1(J:3-47)e3hpgA1(A:4-47)e3hpgB1(B:4-47)e3hpgC1(C:4-48)e3hphA1(A:4-43)e5m0qG2(G:4-47)e5m0qO2(O:4-47)e5m0rG2(G:4-47)e5m0rO2(O:4-47)e5m0qF3(F:4-47)e5m0qN1(N:4-47)e5m0rF2(F:4-47)e5m0rN3(N:4-47)e5m0qB3(B:44-204)e5m0qJ1(J:44-204)e5m0qC1(C:47-194)e5m0qK1(K:47-194)e5m0qF1(F:47-204)e5m0qN3(N:47-204)e3hpgA2(A:48-212)e3hpgB2(B:48-212)e3hpgF2(F:48-212)e5m0qA1(A:48-204)e5m0qG1(G:48-219)e5m0qI1(I:48-204)e5m0qO1(O:48-219)e5m0rA1(A:48-208)e5m0rG1(G:48-219)e5m0rO1(O:48-219)e5m0rI1(I:48-194)e5m0rC1(C:48-194)e5m0rK1(K:48-194)e5m0rB1(B:48-204)e5m0rF3(F:48-204)e5m0rJ2(J:48-204)e5m0rN2(N:48-204)e3hphB2(B:55-215)e3hphC2(C:55-216)e3hpgE4(E:58-212)e3hpgC3(C:58-212)e3hpgD4(D:58-212)e3hphA2(A:60-213)e3hphD2(D:60-214)e5m0qD1(D:60-221)e5m0qE1(E:60-194)e5m0qH1(H:60-221)e5m0qL1(L:60-221)e5m0qM1(M:60-194)e5m0qP1(P:60-221)e5m0rD1(D:60-221)e5m0rE1(E:60-194)e5m0rH1(H:60-221)e5m0rL1(L:60-221)e5m0rM1(M:60-194)e5m0rP1(P:60-221)e5t3aA1(A:60-221)e5m0rC3(C:195-273)e5m0rK3(K:195-273)e5m0qA3(A:205-276)e5m0qI3(I:205-276)e5m0qB2(B:205-273)e5m0qF2(F:205-278)e5m0qJ3(J:205-273)e5m0qN2(N:205-276)e5m0rB2(B:205-273)e5m0rF1(F:205-278)e5m0rJ3(J:205-273)e5m0rN1(N:205-278)e5m0rA3(A:209-276)e5lljA1(A:220-276)e5lljB1(B:220-276)e5m0qD2(D:222-275)e5m0qH2(H:222-276)e5m0qL2(L:222-275)e5m0qP2(P:222-276)e5m0rD2(D:222-275)e5m0rH2(H:222-276)e5m0rL2(L:222-275)e5m0rP2(P:222-276)e5t3aA2(A:222-275)e5m0rI3(I:223-276)e5m0qC3(C:223-273)e5m0qE3(E:223-272)e5m0qK3(K:223-273)e5m0qM3(M:223-272)e5m0rE3(E:223-272)e5m0rM3(M:223-272)

3D Structure

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Domain Details

#Domain IDRangeX-groupH-groupT-groupFamily
1e3hphB1B:1-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
2e3hphC1C:1-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
3e5m0rA2A:1-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
4e5m0rI2I:1-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
5e5m0qC2C:1-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
6e5m0qE2E:1-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
7e5m0qK2K:1-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
8e5m0rC2C:1-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
9e5m0rE2E:1-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
10e5m0rK2K:1-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
11e5m0rM2M:1-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
12e3hpgF1F:2-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
13e3hpgE3E:2-49101101.1101.1.1
101.1.1.14(Integrase_Zn)
14e3hpgD3D:2-49101101.1101.1.1
101.1.1.14(Integrase_Zn)
15e5m0qA2A:2-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
16e5m0qI2I:2-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
17e5m0qM2M:2-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
18e3hphD1D:3-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
19e5m0qB1B:3-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
20e5m0qJ2J:3-44101101.1101.1.1
101.1.1.14(Integrase_Zn)
21e5m0rB3B:3-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
22e5m0rJ1J:3-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
23e3hpgA1A:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
24e3hpgB1B:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
25e3hpgC1C:4-48101101.1101.1.1
101.1.1.14(Integrase_Zn)
26e3hphA1A:4-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
27e5m0qG2G:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
28e5m0qO2O:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
29e5m0rG2G:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
30e5m0rO2O:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
31e5m0qF3F:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
32e5m0qN1N:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
33e5m0rF2F:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
34e5m0rN3N:4-47101101.1101.1.1
101.1.1.14(Integrase_Zn)
35e5m0qB3B:44-20424842484.12484.1.1
36e5m0qJ1J:44-20424842484.12484.1.1
37e5m0qC1C:47-19424842484.12484.1.1
38e5m0qK1K:47-19424842484.12484.1.1
39e5m0qF1F:47-20424842484.12484.1.1
40e5m0qN3N:47-20424842484.12484.1.1
41e3hpgA2A:48-21224842484.12484.1.1
42e3hpgB2B:48-21224842484.12484.1.1
43e3hpgF2F:48-21224842484.12484.1.1
44e5m0qA1A:48-20424842484.12484.1.1
45e5m0qG1G:48-21924842484.12484.1.1
46e5m0qI1I:48-20424842484.12484.1.1
47e5m0qO1O:48-21924842484.12484.1.1
48e5m0rA1A:48-20824842484.12484.1.1
49e5m0rG1G:48-21924842484.12484.1.1
50e5m0rO1O:48-21924842484.12484.1.1
51e5m0rI1I:48-19424842484.12484.1.1
52e5m0rC1C:48-19424842484.12484.1.1
53e5m0rK1K:48-19424842484.12484.1.1
54e5m0rB1B:48-20424842484.12484.1.1
55e5m0rF3F:48-20424842484.12484.1.1
56e5m0rJ2J:48-20424842484.12484.1.1
57e5m0rN2N:48-20424842484.12484.1.1
58e3hphB2B:55-21524842484.12484.1.1
59e3hphC2C:55-21624842484.12484.1.1
60e3hpgE4E:58-21224842484.12484.1.1
61e3hpgC3C:58-21224842484.12484.1.1
62e3hpgD4D:58-21224842484.12484.1.1
63e3hphA2A:60-21324842484.12484.1.1
64e3hphD2D:60-21424842484.12484.1.1
65e5m0qD1D:60-22124842484.12484.1.1
66e5m0qE1E:60-19424842484.12484.1.1
67e5m0qH1H:60-22124842484.12484.1.1
68e5m0qL1L:60-22124842484.12484.1.1
69e5m0qM1M:60-19424842484.12484.1.1
70e5m0qP1P:60-22124842484.12484.1.1
71e5m0rD1D:60-22124842484.12484.1.1
72e5m0rE1E:60-19424842484.12484.1.1
73e5m0rH1H:60-22124842484.12484.1.1
74e5m0rL1L:60-22124842484.12484.1.1
75e5m0rM1M:60-19424842484.12484.1.1
76e5m0rP1P:60-22124842484.12484.1.1
77e5t3aA1A:60-22124842484.12484.1.1
78e5m0rC3C:195-27344.14.1.1
79e5m0rK3K:195-27344.14.1.1
80e5m0qA3A:205-27644.14.1.1
81e5m0qI3I:205-27644.14.1.1
82e5m0qB2B:205-27344.14.1.1
4.1.1.8(IN_DBD_C)
83e5m0qF2F:205-27844.14.1.1
84e5m0qJ3J:205-27344.14.1.1
4.1.1.8(IN_DBD_C)
85e5m0qN2N:205-27644.14.1.1
86e5m0rB2B:205-27344.14.1.1
4.1.1.8(IN_DBD_C)
87e5m0rF1F:205-27844.14.1.1
88e5m0rJ3J:205-27344.14.1.1
4.1.1.8(IN_DBD_C)
89e5m0rN1N:205-27844.14.1.1
90e5m0rA3A:209-27644.14.1.1
91e5lljA1A:220-27644.14.1.1
4.1.1.8(IN_DBD_C)
92e5lljB1B:220-27644.14.1.1
4.1.1.8(IN_DBD_C)
93e5m0qD2D:222-27544.14.1.1
4.1.1.8(IN_DBD_C)
94e5m0qH2H:222-27644.14.1.1
4.1.1.8(IN_DBD_C)
95e5m0qL2L:222-27544.14.1.1
4.1.1.8(IN_DBD_C)
96e5m0qP2P:222-27644.14.1.1
4.1.1.8(IN_DBD_C)
97e5m0rD2D:222-27544.14.1.1
4.1.1.8(IN_DBD_C)
98e5m0rH2H:222-27644.14.1.1
4.1.1.8(IN_DBD_C)
99e5m0rL2L:222-27544.14.1.1
4.1.1.8(IN_DBD_C)
100e5m0rP2P:222-27644.14.1.1
4.1.1.8(IN_DBD_C)
101e5t3aA2A:222-27544.14.1.1
4.1.1.8(IN_DBD_C)
102e5m0rI3I:223-27644.14.1.1
4.1.1.8(IN_DBD_C)
103e5m0qC3C:223-27344.14.1.1
4.1.1.8(IN_DBD_C)
104e5m0qE3E:223-27244.14.1.1
4.1.1.8(IN_DBD_C)
105e5m0qK3K:223-27344.14.1.1
4.1.1.8(IN_DBD_C)
106e5m0qM3M:223-27244.14.1.1
4.1.1.8(IN_DBD_C)
107e5m0rE3E:223-27244.14.1.1
4.1.1.8(IN_DBD_C)
108e5m0rM3M:223-27244.14.1.1
4.1.1.8(IN_DBD_C)