254780758
hypothetical protein CLIBASIA_03225
GeneID in NCBI database: | 8209763 | Locus tag: | CLIBASIA_03225 |
Protein GI in NCBI database: | 254780758 | Protein Accession: | YP_003065171.1 |
Gene range: | -(508500, 509150) | Protein Length: | 216aa |
Gene description: | hypothetical protein | ||
COG prediction: | [R] Zn-dependent hydrolases, including glyoxylases | ||
KEGG prediction: | hypothetical protein | ||
SEED prediction: | Hypothetical metal-binding enzyme, YcbL homolog | ||
Pathway involved in KEGG: | not defined | ||
Subsystem involved in SEED: | Glutathione: Non-redox reactions | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
Identity | Alignment graph | Length | Definition | E-value | |
Target | 216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | |||
254780583 | 256 | glyoxalase II [Candidatus Liberibacter asiaticus s | 2e-15 |
>gi|254780583|ref|YP_003064996.1| glyoxalase II [Candidatus Liberibacter asiaticus str. psy62] Length = 256 | Back alignment |
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Score = 73.6 bits (179), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 22/188 (11%) Query: 9 VQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGA 68 + ++ + N L D II +++ + + + I+ TH H+DH Sbjct: 6 IAISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRAN 65 Query: 69 AQLKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIF 128 LK+ + TI GP ++E +++ I D L DGDT G+H Sbjct: 66 LNLKKFFNCTIFGP----------LEESSKIPGI---------DHGLSDGDTFDFGSHPI 106 Query: 129 KVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGD 188 K+ PGH+ GH+ Y ++F +GDTLF GR I Y ++ S+ KI D Sbjct: 107 KIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR--IFEDSYAEMFESL-EKIKSFSD 163 Query: 189 EISFVCGH 196 + GH Sbjct: 164 KTHIYFGH 171 |
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | |||
315121921 | 216 | hypothetical protein CKC_00855 [Candidatus Liberibacter | 1 | 1e-108 | |
163761577 | 215 | putative beta-lactamase family protein [Hoeflea phototr | 1 | 7e-70 | |
227822823 | 213 | metallo-beta-lactamase family protein [Sinorhizobium fr | 1 | 1e-69 | |
15966085 | 213 | hypothetical protein SMc01587 [Sinorhizobium meliloti 1 | 1 | 3e-69 | |
325293561 | 222 | hydrolase [Agrobacterium sp. H13-3] Length = 222 | 1 | 9e-69 | |
150397440 | 213 | beta-lactamase domain-containing protein [Sinorhizobium | 1 | 1e-68 | |
222086575 | 214 | hydrolase protein [Agrobacterium radiobacter K84] Lengt | 1 | 3e-67 | |
116253200 | 214 | beta-lactamase family protein [Rhizobium leguminosarum | 1 | 3e-66 | |
15889480 | 214 | hydrolase [Agrobacterium tumefaciens str. C58] Length = | 1 | 3e-66 | |
209550332 | 217 | beta-lactamase [Rhizobium leguminosarum bv. trifolii WS | 1 | 3e-66 |
>gi|315121921|ref|YP_004062410.1| hypothetical protein CKC_00855 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 216 | Back alignment and organism information |
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Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/216 (85%), Positives = 202/216 (93%) Query: 1 MSKLSFHIVQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHG 60 MSKLSF+ ++VTPFKQNCTFLFDEESLEAVV+DPGGDLD IKDVI+SRNF VKQIWITHG Sbjct: 1 MSKLSFYSLKVTPFKQNCTFLFDEESLEAVVIDPGGDLDRIKDVIKSRNFRVKQIWITHG 60 Query: 61 HVDHVGGAAQLKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDT 120 H+DHVGGAAQLKEDLSL IIGPHKDDA MM V+EQA+LLS+ MN RN SSD WLQDGD+ Sbjct: 61 HIDHVGGAAQLKEDLSLQIIGPHKDDAMMMNNVEEQAKLLSVCMNERNTSSDHWLQDGDS 120 Query: 121 LLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSIN 180 + +G H+FKVFHCPGHSPGHVIYVNFENNFAHLGDTLFR SIG+TDILHG+YQQL+NSIN Sbjct: 121 VSVGKHVFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRDSIGKTDILHGNYQQLMNSIN 180 Query: 181 NKILPLGDEISFVCGHGPNSTIGRERRLNPFLKSNI 216 NKILPLGDEISFVCGHGPNSTIGRERRLNPFLKSN+ Sbjct: 181 NKILPLGDEISFVCGHGPNSTIGRERRLNPFLKSNM 216 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|163761577|ref|ZP_02168648.1| putative beta-lactamase family protein [Hoeflea phototrophica DFL-43] Length = 215 | Back alignment and organism information |
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>gi|227822823|ref|YP_002826795.1| metallo-beta-lactamase family protein [Sinorhizobium fredii NGR234] Length = 213 | Back alignment and organism information |
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>gi|15966085|ref|NP_386438.1| hypothetical protein SMc01587 [Sinorhizobium meliloti 1021] Length = 213 | Back alignment and organism information |
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>gi|325293561|ref|YP_004279425.1| hydrolase [Agrobacterium sp. H13-3] Length = 222 | Back alignment and organism information |
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>gi|150397440|ref|YP_001327907.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] Length = 213 | Back alignment and organism information |
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>gi|222086575|ref|YP_002545109.1| hydrolase protein [Agrobacterium radiobacter K84] Length = 214 | Back alignment and organism information |
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>gi|116253200|ref|YP_769038.1| beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 214 | Back alignment and organism information |
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>gi|15889480|ref|NP_355161.1| hydrolase [Agrobacterium tumefaciens str. C58] Length = 214 | Back alignment and organism information |
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>gi|209550332|ref|YP_002282249.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 217 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | ||
TIGR03413 | 248 | TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase | 1e-25 | |
smart00849 | 183 | smart00849, Lactamase_B, Metallo-beta-lactamase superfa | 5e-24 | |
KOG0814 | 237 | KOG0814, KOG0814, KOG0814, Glyoxylase [General function | 2e-18 | |
PLN02398 | 329 | PLN02398, PLN02398, hydroxyacylglutathione hydrolase | 1e-16 | |
PRK10241 | 251 | PRK10241, PRK10241, hydroxyacylglutathione hydrolase; P | 9e-15 | |
PLN02469 | 258 | PLN02469, PLN02469, hydroxyacylglutathione hydrolase | 3e-13 | |
KOG0813 | 265 | KOG0813, KOG0813, KOG0813, Glyoxylase [General function | 2e-12 | |
PLN02962 | 251 | PLN02962, PLN02962, hydroxyacylglutathione hydrolase | 4e-10 | |
COG0491 | 252 | COG0491, GloB, Zn-dependent hydrolases, including glyox | 1e-28 | |
pfam00753 | 148 | pfam00753, Lactamase_B, Metallo-beta-lactamase superfam | 2e-15 |
>gnl|CDD|163252 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase | Back alignment and domain information |
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>gnl|CDD|129082 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily | Back alignment and domain information |
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>gnl|CDD|36032 KOG0814, KOG0814, KOG0814, Glyoxylase [General function prediction only] | Back alignment and domain information |
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>gnl|CDD|178020 PLN02398, PLN02398, hydroxyacylglutathione hydrolase | Back alignment and domain information |
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>gnl|CDD|182327 PRK10241, PRK10241, hydroxyacylglutathione hydrolase; Provisional | Back alignment and domain information |
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>gnl|CDD|178088 PLN02469, PLN02469, hydroxyacylglutathione hydrolase | Back alignment and domain information |
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>gnl|CDD|36031 KOG0813, KOG0813, KOG0813, Glyoxylase [General function prediction only] | Back alignment and domain information |
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>gnl|CDD|178547 PLN02962, PLN02962, hydroxyacylglutathione hydrolase | Back alignment and domain information |
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>gnl|CDD|30837 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only] | Back alignment and domain information |
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>gnl|CDD|144377 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | ||
TIGR03413 | 248 | GSH_gloB hydroxyacylglutathione hydrolase. Members of t | 100.0 | |
PRK10241 | 251 | hydroxyacylglutathione hydrolase; Provisional | 100.0 | |
KOG0813 | 265 | consensus | 100.0 | |
KOG0814 | 237 | consensus | 100.0 | |
smart00849 | 183 | Lactamase_B Metallo-beta-lactamase superfamily. Apart f | 99.97 | |
COG0491 | 252 | GloB Zn-dependent hydrolases, including glyoxylases [Ge | 99.96 | |
PRK11921 | 395 | metallo-beta-lactamase/flavodoxin domain-containing pro | 99.84 | |
COG0426 | 388 | FpaA Uncharacterized flavoproteins [Energy production a | 99.83 | |
PRK05452 | 479 | anaerobic nitric oxide reductase flavorubredoxin; Provi | 99.81 | |
COG0595 | 555 | mRNA degradation ribonucleases J1/J2 (metallo-beta-lact | 99.77 | |
TIGR00649 | 593 | MG423 conserved hypothetical protein; InterPro: IPR0046 | 99.72 | |
PRK11539 | 754 | hypothetical protein; Provisional | 99.68 | |
COG2333 | 293 | ComEC Predicted hydrolase (metallo-beta-lactamase super | 99.56 | |
COG2015 | 655 | Alkyl sulfatase and related hydrolases [Secondary metab | 99.18 | |
KOG4736 | 302 | consensus | 98.91 | |
PRK00685 | 228 | metal-dependent hydrolase; Provisional | 98.88 | |
COG2220 | 258 | Predicted Zn-dependent hydrolases of the beta-lactamase | 98.5 | |
TIGR00361 | 731 | ComEC_Rec2 DNA internalization-related competence prote | 96.87 | |
pfam00753 | 148 | Lactamase_B Metallo-beta-lactamase superfamily. | 99.82 | |
TIGR03675 | 630 | arCOG00543 arCOG01782 universal archaeal KH-domain/beta | 99.64 | |
PRK00055 | 259 | ribonuclease Z; Reviewed | 99.5 | |
COG1236 | 427 | YSH1 Predicted exonuclease of the beta-lactamase fold i | 99.45 | |
PRK02113 | 252 | putative hydrolase; Provisional | 99.28 | |
COG1782 | 637 | Predicted metal-dependent RNase, consists of a metallo- | 99.19 | |
TIGR02651 | 327 | RNase_Z ribonuclease Z; InterPro: IPR013471 All tRNA mo | 99.18 | |
PRK11244 | 250 | phnP carbon-phosphorus lyase complex accessory protein; | 99.14 | |
TIGR03307 | 249 | PhnP phosphonate metabolism protein PhnP. This family o | 99.05 | |
KOG1136 | 501 | consensus | 98.91 | |
KOG1137 | 668 | consensus | 98.78 | |
PRK04286 | 294 | hypothetical protein; Provisional | 98.75 | |
KOG1135 | 764 | consensus | 98.64 | |
pfam02112 | 323 | PDEase_II cAMP phosphodiesterases class-II. | 98.6 | |
COG2248 | 304 | Predicted hydrolase (metallo-beta-lactamase superfamily | 98.25 | |
KOG1361 | 481 | consensus | 97.53 | |
TIGR02649 | 304 | true_RNase_BN ribonuclease BN; InterPro: IPR013469 Prot | 96.61 | |
COG1237 | 259 | Metal-dependent hydrolases of the beta-lactamase superf | 99.24 | |
PRK05184 | 302 | pyrroloquinoline quinone biosynthesis protein PqqB; Pro | 99.09 | |
PRK02126 | 334 | ribonuclease Z; Provisional | 99.01 | |
COG1234 | 292 | ElaC Metal-dependent hydrolases of the beta-lactamase s | 98.79 | |
COG1235 | 269 | PhnP Metal-dependent hydrolases of the beta-lactamase s | 98.78 | |
KOG2121 | 746 | consensus | 97.17 | |
TIGR02650 | 277 | RNase_Z_T_toga ribonuclease Z, Thermotoga type; InterPr | 96.31 | |
TIGR02108 | 314 | PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B; Inter | 94.27 | |
PRK11709 | 355 | putative L-ascorbate 6-phosphate lactonase; Provisional | 97.41 | |
COG5212 | 356 | PDE1 Low-affinity cAMP phosphodiesterase [Signal transd | 96.99 | |
TIGR01393 | 598 | lepA GTP-binding protein LepA; InterPro: IPR006297 LepA | 93.55 |
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase | Back alignment and domain information |
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>PRK10241 hydroxyacylglutathione hydrolase; Provisional | Back alignment and domain information |
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>KOG0813 consensus | Back alignment and domain information |
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>KOG0814 consensus | Back alignment and domain information |
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>smart00849 Lactamase_B Metallo-beta-lactamase superfamily | Back alignment and domain information |
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>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] | Back alignment and domain information |
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>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional | Back alignment and domain information |
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>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] | Back alignment and domain information |
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>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional | Back alignment and domain information |
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>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] | Back alignment and domain information |
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>TIGR00649 MG423 conserved hypothetical protein; InterPro: IPR004613 This is a family of conserved hypothetical proteins, the members of which contain an ATP-binding domain at the N-terminal end of the protein | Back alignment and domain information |
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>PRK11539 hypothetical protein; Provisional | Back alignment and domain information |
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>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
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>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
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>KOG4736 consensus | Back alignment and domain information |
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>PRK00685 metal-dependent hydrolase; Provisional | Back alignment and domain information |
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>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] | Back alignment and domain information |
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>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2; InterPro: IPR004797 This is the DNA internalisation-related competence protein ComEC/Rec2 family | Back alignment and domain information |
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>pfam00753 Lactamase_B Metallo-beta-lactamase superfamily | Back alignment and domain information |
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>TIGR03675 arCOG00543 arCOG01782 universal archaeal KH-domain/beta-lactamase-domain protein | Back alignment and domain information |
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>PRK00055 ribonuclease Z; Reviewed | Back alignment and domain information |
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>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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>PRK02113 putative hydrolase; Provisional | Back alignment and domain information |
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>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] | Back alignment and domain information |
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>TIGR02651 RNase_Z ribonuclease Z; InterPro: IPR013471 All tRNA molecules are synthesised as long precursors with extra sequence at both the 5' and 3' ends, which undergo several processing steps to form the mature tRNA molecule | Back alignment and domain information |
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>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional | Back alignment and domain information |
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>TIGR03307 PhnP phosphonate metabolism protein PhnP | Back alignment and domain information |
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>KOG1136 consensus | Back alignment and domain information |
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>KOG1137 consensus | Back alignment and domain information |
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>PRK04286 hypothetical protein; Provisional | Back alignment and domain information |
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>KOG1135 consensus | Back alignment and domain information |
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>pfam02112 PDEase_II cAMP phosphodiesterases class-II | Back alignment and domain information |
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>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] | Back alignment and domain information |
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>KOG1361 consensus | Back alignment and domain information |
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>TIGR02649 true_RNase_BN ribonuclease BN; InterPro: IPR013469 Proteins in this entry include ribonuclease BN of Escherichia coli (strain K-12) and closely related proteins believed to be equivalent in function | Back alignment and domain information |
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>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] | Back alignment and domain information |
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>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional | Back alignment and domain information |
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>PRK02126 ribonuclease Z; Provisional | Back alignment and domain information |
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>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] | Back alignment and domain information |
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>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] | Back alignment and domain information |
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>KOG2121 consensus | Back alignment and domain information |
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>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type; InterPro: IPR013470 All tRNA molecules are synthesised as long precursors with extra sequence at both the 5' and 3' ends, which undergo several processing steps to form the mature tRNA molecule | Back alignment and domain information |
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>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B; InterPro: IPR011842 This entry describes coenzyme PQQ biosynthesis protein B, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ) | Back alignment and domain information |
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>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional | Back alignment and domain information |
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>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] | Back alignment and domain information |
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>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu | Back alignment and domain information |
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Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | ||
2xf4_A | 210 | Crystal Structure Of Salmonella Enterica Serovar Ty | 2e-47 | |
2zwr_A | 207 | Crystal Structure Of Ttha1623 From Thermus Thermoph | 3e-33 | |
1xm8_A | 254 | X-Ray Structure Of Glyoxalase Ii From Arabidopsis T | 3e-25 | |
2gcu_A | 245 | X-Ray Structure Of Gene Product From Arabidopsis Th | 9e-20 | |
1qh3_A | 260 | Human Glyoxalase Ii With Cacodylate And Acetate Ion | 4e-19 | |
3r2u_A | 466 | 2.1 Angstrom Resolution Crystal Structure Of Metall | 1e-17 | |
2qed_A | 258 | Crystal Structure Of Salmonella Thyphimurium Lt2 Gl | 7e-17 | |
2p18_A | 311 | Crystal Structure Of The Leishmania Infantum Glyoxa | 2e-06 | |
2zo4_A | 317 | Crystal Structure Of Metallo-Beta-Lactamase Family | 0.001 | |
2vw8_A | 303 | Crystal Structure Of Quinolone Signal Response Prot | 0.001 | |
3dh8_A | 303 | Structure Of Pseudomonas Quinolone Signal Response | 0.001 | |
2q0j_A | 321 | Structure Of Pseudomonas Quinolone Signal Response | 0.001 | |
2q0i_A | 303 | Structure Of Pseudomonas Quinolone Signal Response | 0.001 |
>gi|301598408|pdb|2XF4|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Ycbl Length = 210 | Back alignment and structure |
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 138/211 (65%), Gaps = 1/211 (0%) Query: 4 LSFHIVQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVD 63 +++ I+ VT F QNC+ ++ E++ A +VDPGGD + IK + + + QI +THGH+D Sbjct: 1 MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLD 60 Query: 64 HVGGAAQLKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLL 123 HVG A++L + + +IGP K+D + + Q+R+ + + + DRWL DGD + + Sbjct: 61 HVGAASELAQHYGVPVIGPEKEDEFWLQGLPAQSRMFGLDEC-QPLTPDRWLNDGDRVSV 119 Query: 124 GTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKI 183 G +V HCPGH+PGHV++ + ++ GD +F+ +GR+D GD+ QLI++I K+ Sbjct: 120 GNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVGRSDFPRGDHTQLIDAIKRKL 179 Query: 184 LPLGDEISFVCGHGPNSTIGRERRLNPFLKS 214 LPLGD+++F+ GHGP ST+G ER NPFL+ Sbjct: 180 LPLGDDVTFIPGHGPLSTLGYERLHNPFLQD 210 |
gi|260656160|pdb|2ZWR|A Chain A, Crystal Structure Of Ttha1623 From Thermus Thermophilus Hb8 Length = 207 | Back alignment and structure |
>gi|56554604|pdb|1XM8|A Chain A, X-Ray Structure Of Glyoxalase Ii From Arabidopsis Thaliana Gene At2g31350 Length = 254 | Back alignment and structure |
>gi|99032459|pdb|2GCU|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At1g53580 Length = 245 | Back alignment and structure |
gi|6137437|pdb|1QH3|A Chain A, Human Glyoxalase Ii With Cacodylate And Acetate Ions Present In The Active Site Length = 260 | Back alignment and structure |
>gi|326634640|pdb|3R2U|A Chain A, 2.1 Angstrom Resolution Crystal Structure Of Metallo-Beta-Lactamase From Staphylococcus Aureus Subsp. Aureus Col Length = 466 | Back alignment and structure |
>gi|158430160|pdb|2QED|A Chain A, Crystal Structure Of Salmonella Thyphimurium Lt2 Glyoxalase Ii Length = 258 | Back alignment and structure |
>gi|165760938|pdb|2P18|A Chain A, Crystal Structure Of The Leishmania Infantum Glyoxalase Ii Length = 311 | Back alignment and structure |
gi|225698002|pdb|2ZO4|A Chain A, Crystal Structure Of Metallo-Beta-Lactamase Family Protein Ttha1429 From Thermus Thermophilus Hb8 Length = 317 | Back alignment and structure |
>gi|300508335|pdb|2VW8|A Chain A, Crystal Structure Of Quinolone Signal Response Protein Pqse From Pseudomonas Aeruginosa Length = 303 | Back alignment and structure |
>gi|241913148|pdb|3DH8|A Chain A, Structure Of Pseudomonas Quinolone Signal Response Protein Pqse Length = 303 | Back alignment and structure |
>gi|189339511|pdb|2Q0J|A Chain A, Structure Of Pseudomonas Quinolone Signal Response Protein Pqse Length = 321 | Back alignment and structure |
>gi|189339510|pdb|2Q0I|A Chain A, Structure Of Pseudomonas Quinolone Signal Response Protein Pqse Length = 303 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | ||
2xf4_A | 210 | Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salm | 2e-52 | |
2zwr_A | 207 | Metallo-beta-lactamase superfamily protein; hydrolase; | 2e-31 | |
2vw8_A | 303 | PA1000, PQSE; quinolone signal response protein, signal | 1e-24 | |
1qh5_A | 260 | Glyoxalase II, protein (hydroxyacylglutathione hydrolas | 3e-24 | |
1xm8_A | 254 | Glyoxalase II; structural genomics, protein structure i | 4e-24 | |
3l6n_A | 219 | Metallo-beta-lactamase; zinc, hydolase, antibiotics res | 7e-24 | |
3adr_A | 261 | Putative uncharacterized protein ST1585; quorum sensing | 1e-23 | |
1k07_A | 263 | FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alph | 1e-22 | |
2whg_A | 230 | VIM-4 metallo-beta-lactamase; hydrolase, alpha-beta/BET | 1e-21 | |
1ko3_A | 230 | VIM-2 metallo-beta-lactamase; alpha-beta/BETA-alpha fol | 3e-20 | |
1m2x_A | 223 | Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fol | 3e-19 | |
1jjt_A | 228 | IMP-1 metallo beta-lactamase; metallo-beta-lactamase in | 4e-19 | |
2gmn_A | 274 | Metallo-beta-lactamase; hydrolase; 1.40A {Bradyrhizobiu | 2e-17 | |
2p18_A | 311 | Glyoxalase II; metalloprotein, beta sandwich, alpha-hel | 2e-17 | |
1a7t_A | 232 | Metallo-beta-lactamase; hydrolase (beta-lactamase), zin | 3e-17 | |
3iog_A | 227 | Beta-lactamase; hydrolase, antibiotic resistance, metal | 4e-17 | |
2qed_A | 258 | Hydroxyacylglutathione hydrolase; metallo-B- lactamase | 5e-17 | |
1mqo_A | 227 | Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolas | 2e-16 | |
2q0i_A | 303 | Quinolone signal response protein; quorum sensing, pseu | 3e-16 | |
1e5d_A | 402 | Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DII | 6e-16 | |
2yz3_A | 266 | Metallo-beta-lactamase; enzyme-inhibitor complex, hydro | 8e-16 | |
2gcu_A | 245 | Putative hydroxyacylglutathione hydrolase 3; ethylmalon | 3e-15 | |
1sml_A | 269 | Protein (penicillinase); metallo-beta-lactamase, antibi | 6e-15 | |
2p97_A | 201 | Hypothetical protein; structural genomics, joint center | 2e-14 | |
2q9u_A | 414 | A-type flavoprotein; flavodoxin like, beta lactamase li | 1e-13 | |
1ycg_A | 398 | Nitric oxide reductase; DIIRON site, oxidoreductase; HE | 2e-12 | |
1x8h_A | 228 | Beta-lactamase; hydrolase; 1.60A {Aeromonas hydrophila} | 2e-12 | |
2ohh_A | 404 | Type A flavoprotein FPRA; beta-lactamase like domain, f | 2e-12 | |
1vme_A | 410 | Flavoprotein; TM0755, structural genomics, JCSG, protei | 3e-12 | |
1p9e_A | 331 | Methyl parathion hydrolase; Zn containing; 2.40A {Pseud | 4e-12 | |
2zo4_A | 317 | Metallo-beta-lactamase family protein; hydrolase; 2.10A | 8e-11 | |
2fhx_A | 246 | SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiot | 1e-10 | |
3hnn_A | 262 | Putative diflavin flavoprotein A 5; PSI-2, protein stru | 7e-10 | |
1ztc_A | 221 | Hypothetical protein TM0894; structural genomics, PSI, | 6e-09 | |
2cfu_A | 658 | SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1 | 2e-08 | |
3bk2_A | 562 | RNAse J, metal dependent hydrolase; endoribonuclease, e | 8e-04 | |
2r2d_A | 276 | AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acy | 3e-11 | |
3dha_A | 254 | N-acyl homoserine lactone hydrolase; zinc bimetallohydr | 9e-08 | |
3esh_A | 280 | Protein similar to metal-dependent hydrolase; structura | 5e-06 | |
2az4_A | 429 | Hypothetical protein EF2904; structural genomics, PSI, | 2e-05 | |
3af5_A | 651 | Putative uncharacterized protein PH1404; archaeal CPSF, | 2e-05 | |
2bib_A | 547 | CBPE, teichoic acid phosphorylcholine esterase/ choline | 0.001 | |
2zdf_A | 431 | Metallo-beta-lactamase superfamily protein; metallo bet | 0.001 | |
2xr1_A | 640 | Cleavage and polyadenylation specificity factor 1 subun | 4e-04 |
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210 | Back alignment and structure |
---|
Score = 200 bits (509), Expect = 2e-52 Identities = 86/208 (41%), Positives = 135/208 (64%), Gaps = 1/208 (0%) Query: 6 FHIVQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHV 65 + I+ VT F QNC+ ++ E++ A +VDPGGD + IK + + + QI +THGH+DHV Sbjct: 3 YRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHV 62 Query: 66 GGAAQLKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGT 125 G A++L + + +IGP K+D + + Q+R+ + + DRWL DGD + +G Sbjct: 63 GAASELAQHYGVPVIGPEKEDEFWLQGLPAQSRMFG-LDECQPLTPDRWLNDGDRVSVGN 121 Query: 126 HIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILP 185 +V HCPGH+PGHV++ + ++ GD +F+ +GR+D GD+ QLI++I K+LP Sbjct: 122 VTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVGRSDFPRGDHTQLIDAIKRKLLP 181 Query: 186 LGDEISFVCGHGPNSTIGRERRLNPFLK 213 LGD+++F+ GHGP ST+G ER NPFL+ Sbjct: 182 LGDDVTFIPGHGPLSTLGYERLHNPFLQ 209 |
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
---|
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Length = 303 | Back alignment and structure |
---|
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GTT GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Length = 260 | Back alignment and structure |
---|
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Length = 254 | Back alignment and structure |
---|
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} Length = 219 | Back alignment and structure |
---|
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Length = 261 | Back alignment and structure |
---|
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER assymmetric UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263 | Back alignment and structure |
---|
>2whg_A VIM-4 metallo-beta-lactamase; hydrolase, alpha-beta/BETA-alpha fold; HET: FLC; 1.90A {Pseudomonas aeruginosa} PDB: 2wrs_A* 1ko3_A 1ko2_A Length = 230 | Back alignment and structure |
---|
>1ko3_A VIM-2 metallo-beta-lactamase; alpha-beta/BETA-alpha fold, hydrolase; 1.91A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1ko2_A Length = 230 | Back alignment and structure |
---|
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Length = 223 | Back alignment and structure |
---|
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Length = 228 | Back alignment and structure |
---|
>2gmn_A Metallo-beta-lactamase; hydrolase; 1.40A {Bradyrhizobium japonicum usda 110} SCOP: d.157.1.1 Length = 274 | Back alignment and structure |
---|
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrolase; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Length = 311 | Back alignment and structure |
---|
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Length = 232 | Back alignment and structure |
---|
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding, periplasm,; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A Length = 227 | Back alignment and structure |
---|
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- lactamase superfamily; 1.45A {Salmonella typhimurium LT2} SCOP: d.157.1.2 Length = 258 | Back alignment and structure |
---|
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 2bfz_A 2bg6_A 2bga_A ... Length = 227 | Back alignment and structure |
---|
>2q0i_A Quinolone signal response protein; quorum sensing, pseudomonas quinolone signal, PQS, metall- beta-lactamase, iron, phosphodiesterase; 1.57A {Pseudomonas aeruginosa} SCOP: d.157.1.14 PDB: 2q0j_A 3dh8_A* Length = 303 | Back alignment and structure |
---|
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Length = 402 | Back alignment and structure |
---|
>2yz3_A Metallo-beta-lactamase; enzyme-inhibitor complex, hydrolase; HET: M5P; 2.30A {Pseudomonas putida} SCOP: d.157.1.1 Length = 266 | Back alignment and structure |
---|
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Length = 245 | Back alignment and structure |
---|
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269 | Back alignment and structure |
---|
>2p97_A Hypothetical protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Length = 201 | Back alignment and structure |
---|
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Length = 414 | Back alignment and structure |
---|
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Length = 398 | Back alignment and structure |
---|
>1x8h_A Beta-lactamase; hydrolase; 1.60A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 3fai_A 1x8i_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A Length = 228 | Back alignment and structure |
---|
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidoreductase; HET: FMN; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2ohi_A* 2ohj_A* Length = 404 | Back alignment and structure |
---|
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3 Length = 410 | Back alignment and structure |
---|
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Length = 331 | Back alignment and structure |
---|
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus HB8} Length = 317 | Back alignment and structure |
---|
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistance, structure, hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Length = 246 | Back alignment and structure |
---|
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP} Length = 262 | Back alignment and structure |
---|
>1ztc_A Hypothetical protein TM0894; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221 | Back alignment and structure |
---|
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* Length = 658 | Back alignment and structure |
---|
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A* Length = 562 | Back alignment and structure |
---|
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center, quorum quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Length = 276 | Back alignment and structure |
---|
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching, alternative binding site, product complex; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovarkurstaki} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Length = 254 | Back alignment and structure |
---|
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 280 | Back alignment and structure |
---|
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Enterococcus faecalis V583} SCOP: d.157.1.10 Length = 429 | Back alignment and structure |
---|
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Length = 651 | Back alignment and structure |
---|
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline binding protein; PCE, hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* Length = 547 | Back alignment and structure |
---|
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Length = 640 | Back alignment and structure |
---|
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | ||
2xf4_A | 210 | Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salm | 100.0 | |
1xm8_A | 254 | Glyoxalase II; structural genomics, protein structure i | 100.0 | |
2qed_A | 258 | Hydroxyacylglutathione hydrolase; metallo-B- lactamase | 100.0 | |
2gcu_A | 245 | Putative hydroxyacylglutathione hydrolase 3; ethylmalon | 100.0 | |
1qh5_A | 260 | Glyoxalase II, protein (hydroxyacylglutathione hydrolas | 100.0 | |
2p18_A | 311 | Glyoxalase II; metalloprotein, beta sandwich, alpha-hel | 100.0 | |
2zwr_A | 207 | Metallo-beta-lactamase superfamily protein; hydrolase; | 100.0 | |
2vw8_A | 303 | PA1000, PQSE; quinolone signal response protein, signal | 100.0 | |
2gmn_A | 274 | Metallo-beta-lactamase; hydrolase; 1.40A {Bradyrhizobiu | 100.0 | |
2zo4_A | 317 | Metallo-beta-lactamase family protein; hydrolase; 2.10A | 100.0 | |
1a7t_A | 232 | Metallo-beta-lactamase; hydrolase (beta-lactamase), zin | 100.0 | |
1m2x_A | 223 | Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fol | 100.0 | |
3l6n_A | 219 | Metallo-beta-lactamase; zinc, hydolase, antibiotics res | 100.0 | |
3adr_A | 261 | Putative uncharacterized protein ST1585; quorum sensing | 100.0 | |
2yz3_A | 266 | Metallo-beta-lactamase; enzyme-inhibitor complex, hydro | 99.97 | |
1k07_A | 263 | FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alph | 99.97 | |
2whg_A | 230 | VIM-4 metallo-beta-lactamase; hydrolase, alpha-beta/BET | 99.97 | |
1mqo_A | 227 | Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolas | 99.97 | |
1jjt_A | 228 | IMP-1 metallo beta-lactamase; metallo-beta-lactamase in | 99.97 | |
3iog_A | 227 | Beta-lactamase; hydrolase, antibiotic resistance, metal | 99.97 | |
1sml_A | 269 | Protein (penicillinase); metallo-beta-lactamase, antibi | 99.97 | |
2fhx_A | 246 | SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiot | 99.96 | |
2cfu_A | 658 | SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1 | 99.96 | |
2p97_A | 201 | Hypothetical protein; putative metal-dependent hydrolas | 99.96 | |
2q9u_A | 414 | A-type flavoprotein; flavodoxin like, beta lactamase li | 99.96 | |
2ohh_A | 404 | Type A flavoprotein FPRA; beta-lactamase like domain, f | 99.96 | |
1ycg_A | 398 | Nitric oxide reductase; DIIRON site, oxidoreductase; HE | 99.95 | |
1e5d_A | 402 | Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DII | 99.95 | |
1vme_A | 410 | Flavoprotein; TM0755, structural genomics, JCSG, protei | 99.95 | |
3esh_A | 280 | Protein similar to metal-dependent hydrolase; structura | 99.95 | |
3hnn_A | 262 | Putative diflavin flavoprotein A 5; PSI-2, protein stru | 99.94 | |
3dha_A | 254 | N-acyl homoserine lactone hydrolase; zinc bimetallohydr | 99.94 | |
2r2d_A | 276 | AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acy | 99.92 | |
1ztc_A | 221 | Hypothetical protein TM0894; structural genomics, PSI, | 99.92 | |
1p9e_A | 331 | Methyl parathion hydrolase; Zn containing; 2.40A {Pseud | 99.92 | |
2bib_A | 547 | CBPE, teichoic acid phosphorylcholine esterase/ choline | 99.72 | |
3kl7_A | 235 | Putative metal-dependent hydrolase; structural genomics | 98.87 | |
3bv6_A | 379 | Metal-dependent hydrolase; metallo protein, beta-lactam | 98.67 | |
1vjn_A | 220 | Zn-dependent hydrolase of metallo-beta-lactamase superf | 98.56 | |
3bk2_A | 562 | RNAse J, metal dependent hydrolase; endoribonuclease, e | 99.79 | |
3af5_A | 651 | Putative uncharacterized protein PH1404; archaeal CPSF, | 99.73 | |
2i7t_A | 459 | Cleavage and polyadenylation specificity factor 73 kDa | 99.72 | |
2xr1_A | 640 | Cleavage and polyadenylation specificity factor 1 subun | 99.69 | |
2az4_A | 429 | Hypothetical protein EF2904; structural genomics, PSI, | 99.65 | |
2i7x_A | 717 | Protein CFT2; polyadenylation, metallo-B-lactamase, PRE | 99.64 | |
1zkp_A | 268 | Hypothetical protein BA1088; zinc binding protein, stru | 99.5 | |
3g1p_A | 258 | Protein PHNP; C-P lyase, phosphodiesterase, phosphonate | 99.38 | |
2wyl_A | 360 | L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59 | 98.52 | |
2p4z_A | 284 | Metal-dependent hydrolases of the beta-lactamase superf | 99.57 | |
3jxp_A | 321 | Coenzyme PQQ synthesis protein B; alpha-beta protein, P | 99.19 | |
2cbn_A | 306 | Ribonuclease Z; phosphodiesterase beta lactamase tRNAse | 99.14 | |
3h3e_A | 267 | Uncharacterized protein TM1679; structural genomics, su | 99.1 | |
1y44_A | 320 | Ribonuclease Z; zinc-dependent metal hydrolase; HET: ME | 99.0 | |
3md7_A | 293 | Beta-lactamase-like; ssgcid, hydrolase, structural geno | 98.68 | |
2e7y_A | 280 | TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, struc | 98.43 |
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} | Back alignment and structure |
---|
Probab=100.00 E-value=0 Score=353.41 Aligned_cols=210 Identities=41% Similarity=0.843 Sum_probs=192.1 Q ss_pred CEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEECC Q ss_conf 35999970876571699998899849998389999999999997499752999869885210110567886079554058 Q gi|254780758|r 4 LSFHIVQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLKEDLSLTIIGPH 83 (216) Q Consensus 4 ~~~~~i~v~~~~~N~~li~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~i~~~~ 83 (216) |++++||+++|++|||+|.++++++++|||||.+.+.+++.+++.+++|++|++||.|+||+||+..|++++++++++.. T Consensus 1 m~~~~i~~~~~~~N~yli~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~l~~~~~~~i~~~~ 80 (210) T 2xf4_A 1 MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGPE 80 (210) T ss_dssp CEEEEEEETTTTEEEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHHTCCEECCC T ss_pred CCEEEEECCCHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEC T ss_conf 94399987844668999998999989999798089999999997799348999787998553518998775098478501 Q ss_pred HHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC Q ss_conf 43898840123444432002346666741896478399762012331012224721000001234321111000001356 Q gi|254780758|r 84 KDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIG 163 (216) Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~lf~~~~G 163 (216) ..+..+..........+.. .......++..+++++.+.+|+.++++++||||||||++++.++.+++|+||.+|.+++| T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dg~~~~~g~~~~~~i~tPGHT~g~~~~~~~~~~~l~~GD~~~~~~~~ 159 (210) T 2xf4_A 81 KEDEFWLQGLPAQSRMFGL-DECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVG 159 (210) T ss_dssp GGGHHHHHTHHHHHHHTTC-CCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEEC T ss_pred CHHHHHHCCCHHHHHHCCC-CCCCCCCCCEEECCCCCCEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCC T ss_conf 0456652042123211033-345567785893168742369989999992699998689997788842148886379704 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCHHHHC Q ss_conf 634679899999999999985199978998488798888999882814514 Q gi|254780758|r 164 RTDILHGDYQQLINSINNKILPLGDEISFVCGHGPNSTIGRERRLNPFLKS 214 (216) Q Consensus 164 ~~d~~~~d~~~~~~sl~~~l~~l~~~~~v~PgHG~~tt~~~e~~~n~~~~~ 214 (216) +++++.+|..++++||++++..++++++|+|||||+||+++||+.|||||+ T Consensus 160 ~~~~~~~d~~~~~~sl~~~l~~l~~~~~v~PGHG~~st~~~e~~~N~~~~~ 210 (210) T 2xf4_A 160 RSDFPRGDHTQLIDAIKRKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQD 210 (210) T ss_dssp CCCSTTCCHHHHHHHHHHHTGGGCTTCEEEESSSCCEEHHHHHHHCTTC-C T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCHHHCC T ss_conf 766788999999999999997089983998999986549999875845249 |
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A | Back alignment and structure |
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>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- lactamase superfamily; 1.45A {Salmonella typhimurium LT2} SCOP: d.157.1.2 | Back alignment and structure |
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>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} | Back alignment and structure |
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>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GTT GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* | Back alignment and structure |
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>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrolase; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* | Back alignment and structure |
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>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A | Back alignment and structure |
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>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* | Back alignment and structure |
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>2gmn_A Metallo-beta-lactamase; hydrolase; 1.40A {Bradyrhizobium japonicum usda 110} SCOP: d.157.1.1 | Back alignment and structure |
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>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus HB8} | Back alignment and structure |
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>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* | Back alignment and structure |
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>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 | Back alignment and structure |
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>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} | Back alignment and structure |
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>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
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>2yz3_A Metallo-beta-lactamase; enzyme-inhibitor complex, hydrolase; HET: M5P; 2.30A {Pseudomonas putida} SCOP: d.157.1.1 | Back alignment and structure |
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>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER assymmetric UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A | Back alignment and structure |
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>2whg_A VIM-4 metallo-beta-lactamase; hydrolase, alpha-beta/BETA-alpha fold; HET: FLC; 1.90A {Pseudomonas aeruginosa} PDB: 2wrs_A* 1ko3_A 1ko2_A | Back alignment and structure |
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>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 2bfz_A 2bg6_A 2bga_A ... | Back alignment and structure |
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>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A | Back alignment and structure |
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>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding, periplasm,; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A | Back alignment and structure |
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>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A | Back alignment and structure |
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>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistance, structure, hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
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>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* | Back alignment and structure |
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>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 | Back alignment and structure |
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>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} | Back alignment and structure |
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>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidoreductase; HET: FMN; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2ohi_A* 2ohj_A* | Back alignment and structure |
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>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* | Back alignment and structure |
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>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 | Back alignment and structure |
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>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3 | Back alignment and structure |
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>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
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>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP} | Back alignment and structure |
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>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching, alternative binding site, product complex; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovarkurstaki} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A | Back alignment and structure |
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>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center, quorum quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} | Back alignment and structure |
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>1ztc_A Hypothetical protein TM0894; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 | Back alignment and structure |
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>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 | Back alignment and structure |
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>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline binding protein; PCE, hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* | Back alignment and structure |
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>3kl7_A Putative metal-dependent hydrolase; structural genomics, joint center for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
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>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural genomics, PSI-2; 1.80A {Vibrio cholerae o1 biovar eltor str} | Back alignment and structure |
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>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 | Back alignment and structure |
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>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A* | Back alignment and structure |
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>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* | Back alignment and structure |
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>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A | Back alignment and structure |
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>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} | Back alignment and structure |
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>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Enterococcus faecalis V583} SCOP: d.157.1.10 | Back alignment and structure |
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>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 | Back alignment and structure |
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>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 | Back alignment and structure |
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>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} | Back alignment and structure |
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>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* | Back alignment and structure |
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>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; 2.10A {Thermoanaerobacter tengcongensis MB4} | Back alignment and structure |
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>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida KT2440} PDB: 1xto_A | Back alignment and structure |
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>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 | Back alignment and structure |
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>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} | Back alignment and structure |
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>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* | Back alignment and structure |
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>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, seattle structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} | Back alignment and structure |
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>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A | Back alignment and structure |
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Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | E-value |
216 | hypothetical protein CLIBASIA_03225 [Candidatus Liberib | |||
d1xm8a_ | 254 | d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hy | 3e-24 | |
d2qeda1 | 251 | d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathio | 2e-18 | |
d2gmna1 | 264 | d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrh | 6e-18 | |
d1k07a_ | 262 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter | 1e-17 | |
d2p97a1 | 200 | d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anab | 7e-17 | |
d1ko3a_ | 230 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas a | 7e-17 | |
d2q0ia1 | 298 | d.157.1.14 (A:1-298) Quinolone signal response protein | 9e-17 | |
d2aioa1 | 266 | d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthom | 2e-16 | |
d1jjta_ | 220 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas a | 5e-16 | |
d1mqoa_ | 221 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cere | 1e-15 | |
d1znba_ | 230 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides f | 2e-14 | |
d1qh5a_ | 260 | d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hy | 8e-14 | |
d1x8ha_ | 228 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hyd | 1e-12 | |
d1m2xa_ | 219 | d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacter | 1e-12 | |
d1ycga2 | 249 | d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal d | 4e-10 | |
d1vmea2 | 250 | d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-ter | 1e-08 | |
d2cfua2 | 505 | d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas | 3e-08 | |
d1p9ea_ | 294 | d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas | 1e-07 | |
d1ztca1 | 207 | d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Therm | 5e-07 | |
d2az4a1 | 183 | d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Ente | 4e-06 |
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 254 | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Glyoxalase II (hydroxyacylglutathione hydrolase) domain: Glyoxalase II (hydroxyacylglutathione hydrolase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702] Score = 105 bits (262), Expect = 3e-24 Identities = 62/246 (25%), Positives = 94/246 (38%), Gaps = 60/246 (24%) Query: 7 HIVQVTPFKQNCTFL-FDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHV 65 I V K N ++ DE++ VVDP + + I D ++ ++ I TH H DH Sbjct: 2 QIELVPCLKDNYAYILHDEDTGTVGVVDPS-EAEPIIDSLKRSGRNLTYILNTHHHYDHT 60 Query: 66 GGAAQLKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGT 125 GG +LK+ +IG D + G D L+DGD + Sbjct: 61 GGNLELKDRYGAKVIGSAMDKDRIPGI-------------------DMALKDGDKWMFAG 101 Query: 126 HIFKVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILP 185 H V PGH+ GH+ + GDT+F S G+ + G +Q++ S+ KI Sbjct: 102 HEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGK--LFEGTPKQMLASL-QKITS 158 Query: 186 LGDEISFVCGHGPN------------------------------------STIGRERRLN 209 L D+ S CGH +T+ E+ N Sbjct: 159 LPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACN 218 Query: 210 PFLKSN 215 PFL+S+ Sbjct: 219 PFLRSS 224 |
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Length = 251 | Back information, alignment and structure |
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>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264 | Back information, alignment and structure |
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