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O15013_ARHGA | Rho guanine nucleotide exchange factor 10   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso O15013 318 YEKKMRDLMASTVGVVE HHHHHHHHHHHCCCCHH c1c-4 DISO 0.0 Bad: -29.381 cosmic_spacer
2 nes_diso O15013 322 MRDLMASTVGVVEIQQ HHHHHHHCCCCHHHHH c1a-4 DISO 0.0 Medium: -33.316 cosmic_phi Medium|
3 nes_diso O15013 463 KLKTVFYRVKEILQ HHHHHHHCHHHHHH c3-4 boundary middle|RhoGEF; 0.0 Bad: -29.6 cosmic_spacer
4 nes_ord O15013 491 EWDSVEMIGDVFVAS HCCCCCCHHHHHHHH c1b-4 ORD middle|RhoGEF; 0.0 Bad: -26.457 cosmic_phi_to_LIVMF
5 nes_ord O15013 498 IGDVFVASFSKSMVLDA HHHHHHHHCCHHHHHHH c1c-4 ORD middle|RhoGEF; 0.0 Medium: -39.744 cosmic_phi
6 nes_diso O15013 518 YVNNFSTAVAVLKK HHCCHHHHHHHHHH c3-4 boundary middle|RhoGEF; 0.0 Weak: -31.42 cosmic_spacer Weak|
7 nes_diso O15013 550 SPDRTTLYSLMMKP CCCCCCHHHHHCHH c2-AT-4 boundary middle|RhoGEF; 0.0 NA cosmic_spacer
8 nes_diso O15013 556 LYSLMMKPIQRFPQFILL HHHHHCHHHHCCCHHHHH c4-4 boundary middle|RhoGEF; 0.0 Bad: -19.608 cosmic_spacer
9 low complexity O15013 563 PIQRFPQFILLLQD HHHCCCHHHHHHHH c3-4 boundary middle|RhoGEF; 0.0 Medium: -34.915 cosmic_spacer
10 low complexity O15013 566 RFPQFILLLQDMLK CCCHHHHHHHHHHH c3-4 __ middle|RhoGEF; 0.0 Bad: -23.501 cosmic_phi
11 nes_diso O15013 663 ERRVFMLNDVLMCA CCEEECCCCCEEEE c2-4 boundary middle|PH-like superfamily; 0.29 Medium: -38.285 Medium|
12 nes_diso O15013 749 LYQDLQNLLHDLNVIG HHHHHHHHHHHHHHHH c1a-4 boundary 0.0 Medium: -38.895 cosmic_spacer Medium|
13 nes_diso O15013 752 DLQNLLHDLNVIGQ HHHHHHHHHHHHHH c3-4 boundary 0.0 Bad: -26.379
14 nes_diso O15013 762 VIGQITQLIGNLKG HHHHHHHHHHCCCC c3-4 boundary 0.0 Medium: -37.468 Medium|
15 nes_diso O15013 824 RPTFFTAVFNTFTPAIKE CCEEEEEEEECCCHHHHH c4-4 boundary 0.62 NA cosmic_phi_to_LIVMF
16 nes_diso O15013 843 WVNSLQMAKLALEE HHHHHHHHHHHHHH c2-5 boundary 0.0 Medium: -37.769 cosmic_phi Medium|
17 nes_beta_diso O15013 877 HPLLVGHMPVMVAKQQ CCCEEEECCEEECCCC c1aR-4 DISO 0.71 Bad: -20.483
18 nes_beta_diso O15013 928 CTHQMGQIAIVSFQN CCCCEEEEEEEECCC c1b-4 boundary 1.0 NA cosmic_spacer
19 nes_beta_diso O15013 940 FQNSTPKVIECFNVES CCCCCCEEEEEECCCC c1a-AT-4 boundary 0.71 NA cosmic_spacer
20 nes_diso O15013 949 ECFNVESRILCMLYVPV EEECCCCCEEEEEECCH c1c-4 boundary 0.5 NA
21 low complexity O15013 1064 KLGVLPVRSLLMME ECCCCCCCEEEEEC c2-5 ORD 0.29 Medium: -35.307 cosmic_spacer
22 nes_beta_diso O15013 1106 QEEGMVISHMAVSG CCCCCEEEEEEEEC c2-4 boundary 0.71 NA cosmic_phi_to_LIVMF
23 nes_beta_diso O15013 1111 VISHMAVSGVGIWI EEEEEEEECCCEEE c2-5 boundary 0.71 NA cosmic_phi_to_LIVMF
24 nes_diso O15013 1113 SHMAVSGVGIWIAFTS EEEEEECCCEEEEEEC c1aR-4 boundary 0.57 NA
25 nes_ord O15013 1135 FHTETLKHLQDINIAT EECCHHHHHCCCCCCC c1a-AT-4 ORD 0.0 NA cosmic_spacer
26 nes_ord O15013 1136 HTETLKHLQDINIAT ECCHHHHHCCCCCCC c1b-4 ORD 0.0 NA cosmic_spacer
27 nes_diso O15013 1158 GHQRLSVTSLLVCH CCCCEEEEHHEECC c2-4 boundary 0.57 NA cosmic_phi
28 nes_diso O15013 1172 GLLMVGTSLGVLVALPV CCCCCCCCCCEEEEEEC c1c-5 boundary 0.25 Medium: -38.281 cosmic_spacer Medium|
29 nes_diso O15013 1172 GLLMVGTSLGVLVA CCCCCCCCCCEEEE c3-4 boundary 0.0 Medium: -34.651 cosmic_spacer Medium|
30 nes_beta_diso O15013 1210 SPVKFIVLATALHEKD CCEEEEEEEECCCCCC c1aR-4 boundary 0.86 NA cosmic_phi
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.