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O43295_SRGP3 | SLIT-ROBO Rho GTPase-activating protein 3   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso O43295 112 DHATLNDIFMNNVIVRL HHHHHHHHHHCHHHHHH c1c-4 DISO middle|F-BAR_srGAP3; boundary|FCH; 0.0 Medium: -35.2 cosmic_spacer Medium|
2 nes_diso O43295 115 TLNDIFMNNVIVRL HHHHHHHCHHHHHH c2-5 DISO middle|F-BAR_srGAP3; boundary|FCH; 0.0 Bad: -27.933 cosmic_phi_to_LIVMF
3 nes_diso O43295 117 NDIFMNNVIVRLSQIS HHHHHCHHHHHHHHHH c1aR-5 DISO middle|F-BAR_srGAP3; boundary|FCH; 0.0 Weak: -30.634 cosmic_phi_to_LIVMF Weak|
4 nes_diso O43295 120 FMNNVIVRLSQISE HHCHHHHHHHHHHH c3-4 DISO middle|F-BAR_srGAP3; boundary|FCH; 0.0 Bad: -28.143 cosmic_phi_to_LIVMF
5 nes_diso O43295 124 VIVRLSQISEDVIRLF HHHHHHHHHHHHHHHH c1aR-5 DISO middle|F-BAR_srGAP3; boundary|FCH; 0.0 Medium: -35.725 cosmic_phi Medium|
6 nes_diso O43295 127 RLSQISEDVIRLFK HHHHHHHHHHHHHH c3-4 DISO middle|F-BAR_srGAP3; boundary|FCH; 0.0 Bad: -24.331 cosmic_phi
7 nes_diso O43295 152 ELLKVTNELYTVMK HHHHHHHHHHHHHH c3-4 DISO middle|F-BAR_srGAP3; 0.0 Weak: -31.402 Weak|
8 nes_diso O43295 269 CDLGFHASLARTFRTYL HHHCHHHHHHHHHHHHH c1cR-4 boundary boundary|F-BAR_srGAP3; 0.0 Bad: -25.736 cosmic_spacer
9 nes_diso O43295 298 GLDVIENAVDNLDS HHHHHHHHHHHCCC c3-4 boundary boundary|F-BAR_srGAP3; 0.0 Bad: -25.892 cosmic_phi_to_LIVMF
10 nes_diso O43295 343 CQVSAQQPVQTELLMRY EEEEECCHHHHHHHHHH c1c-AT-4 boundary 0.12 NA cosmic_spacer
11 nes_diso O43295 358 RYHQLQSRLATLKIEN HHHHHHHHHHHCHHHH c1a-4 DISO 0.0 Weak: -30.232 Weak|
12 nes_diso O43295 379 TLDATMQTLQDMLTVED HHHHHHHHHHHHHHHCC c1c-AT-5 DISO 0.0 NA cosmic_spacer
13 nes_diso O43295 380 LDATMQTLQDMLTVED HHHHHHHHHHHHHHCC c1d-4 DISO 0.0 NA cosmic_phi
14 nes_diso O43295 387 LQDMLTVEDFDVSD HHHHHHHCCCCCCH c2-4 DISO 0.0 Bad: -25.798 cosmic_phi
15 nes_diso O43295 414 AASETYMSKINIAK CCCCCCCCCCCHHH c2-AT-4 DISO 0.0 NA cosmic_spacer
16 nes_diso O43295 436 EMFYFTKFKEYVNGSN HHHHHHHHHHHHCCCC c1aR-4 DISO 0.0 Bad: -25.11 cosmic_phi
17 nes_diso O43295 519 IPLVVESCIRYINLYG CCHHHHHHHHHHHHHC c1a-4 boundary boundary|RhoGAP_srGAP; 0.0 Bad: -29.486 cosmic_phi_to_LIVMF
18 nes_diso O43295 569 NERDINSVAGVLKLYF CHHHHHHHHHHHHHHH c1a-AT-4 boundary middle|RhoGAP_srGAP; 0.0 NA cosmic_spacer
19 nes_diso O43295 569 NERDINSVAGVLKLYF CHHHHHHHHHHHHHHH c1d-4 boundary middle|RhoGAP_srGAP; 0.0 NA cosmic_phi_to_LIVMF
20 nes_diso O43295 572 DINSVAGVLKLYFRG HHHHHHHHHHHHHCC c1b-5 boundary middle|RhoGAP_srGAP; 0.0 NA cosmic_phi_to_LIVMF
21 nes_diso O43295 580 LKLYFRGLENPLFPKE HHHHHCCCCCCCCCHH c1aR-4 boundary middle|RhoGAP_srGAP; 0.0 Bad: -20.016 cosmic_spacer
22 nes_ord O43295 593 PKERFQDLISTIKLEN CHHHHHHHHHHHHCCC c1a-4 ORD middle|RhoGAP_srGAP; 0.0 NA
23 nes_diso O43295 612 RVHQIQQILVTLPRVVIV HHHHHHHHHHCCCHHHHH c4-5 boundary middle|RhoGAP_srGAP; 0.0 Medium: -37.811 cosmic_phi_to_LIVMF Medium|
24 nes_ord O43295 612 RVHQIQQILVTLPR HHHHHHHHHHCCCH c3-4 ORD middle|RhoGAP_srGAP; 0.0 NA cosmic_phi_to_LIVMF
25 low complexity O43295 619 ILVTLPRVVIVVMR HHHCCCHHHHHHHH c3-4 boundary middle|RhoGAP_srGAP; 0.0 Medium: -38.065 cosmic_phi_to_LIVMF
26 low complexity O43295 622 TLPRVVIVVMRY CCCHHHHHHHHH c2-rev boundary middle|RhoGAP_srGAP; 0.0 Bad: -23.965 cosmic_phi_to_LIVMF
27 low complexity O43295 623 LPRVVIVVMRYLFAFLN CCHHHHHHHHHHHHHHH c1c-4 boundary middle|RhoGAP_srGAP; 0.0 Medium: -34.402 cosmic_phi_to_LIVMF
28 low complexity O43295 626 VVIVVMRYLFAFLN HHHHHHHHHHHHHH c3-4 boundary middle|RhoGAP_srGAP; 0.0 Medium: -33.347 cosmic_spacer
29 nes_diso O43295 627 VIVVMRYLFAFLNHLS HHHHHHHHHHHHHHHH c1aR-5 boundary middle|RhoGAP_srGAP; 0.0 Strong: -43.759 cosmic_phi_to_LIVMF Strong|
30 low complexity O43295 627 VIVVMRYLFAFLNH HHHHHHHHHHHHHH c3-4 boundary middle|RhoGAP_srGAP; 0.0 Strong: -43.842 cosmic_phi_to_LIVMF
31 nes_diso O43295 630 VMRYLFAFLNHLSQ HHHHHHHHHHHHHH c3-4 boundary middle|RhoGAP_srGAP; 0.0 Medium: -36.655 cosmic_phi_to_LIVMF Medium|
32 nes_diso O43295 675 CQAHINEVIKTIIIHH CHHHHHHHHHHHHHHC c1a-4 boundary boundary|RhoGAP_srGAP; 0.0 Bad: -28.227 cosmic_spacer
33 nes_diso O43295 843 SDYGFGGVMGRVRLRS CCCCCCCCCCCCCCCC c1a-4 DISO 0.0 Bad: -29.748 cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.