O96017 | Serine/threonine-protein kinase Chk2

O96017_CHK2 | Serine/threonine-protein kinase Chk2 ProteinAtlas Cosmic Proviz Swissmodel

Cosmic Cancer Gene Census (CGC)

#	candidates	uniprotID	start#	sequence	secondary	class	loc_DISO	loc_CDD	beta	Ebind	Cosmic	TOTALscore(Ebind\|Stars)
1	nes_diso	O96017	95	RLWALQDGFANLEC	EEEECCCCCCCCCC	c3-4	boundary	boundary\|FHA; boundary\|FHA;	0.14	Strong: -41.082	cosmic_phi_to_LIVMF L99F;G102R;G102A;E107K;	Strong\|
2	nes_beta_ord	O96017	195	RNKVFVFFDLTVDD	CCEEEEEEECCCCC	c2-4	ORD	boundary\|FHA; boundary\|FHA; boundary\|STKc_Chk2; boundary\|S_TKc;	0.86	NA	cosmic_spacer N196I;K197Q;V198L;V200I;D203N;D203E;
3	nes_diso	O96017	222	MSKTLGSGACGEVKLAF	ECCEEEECCCEEEEEEE	c1c-AT-4	boundary	boundary\|FHA; boundary\|FHA; boundary\|STKc_Chk2; boundary\|S_TKc;	0.62	NA	cosmic_spacer L226F;G229C;A230T;A230P;G232R;K235Q;A237T;
4	nes_diso	O96017	234	VKLAFERKTCKKVAIKI	EEEEEECCCCCEEEEEE	c1c-AT-4	boundary	boundary\|FHA; middle\|STKc_Chk2; boundary\|S_TKc;	0.38	NA	cosmic_spacer K235Q;A237T;A247D;
5	nes_ord	O96017	315	GNKRLKEATCKLYFYQ	HCCCCCHHHHHHHHHH	c1a-AT-4	ORD	middle\|STKc_Chk2; middle\|S_TKc;	0.0	NA	cosmic_spacer K320R;C324Y;K325M;Y327C;
6	nes_ord	O96017	322	ATCKLYFYQMLLAV	HHHHHHHHHHHHHH	c2-4	ORD	middle\|STKc_Chk2; middle\|S_TKc;	0.0	Medium: -34.789	cosmic_phi C324Y;K325M;Y327C;M331T;A334T;
7	nes_ord	O96017	324	CKLYFYQMLLAVQYLH	HHHHHHHHHHHHHHHH	c1aR-5	ORD	middle\|STKc_Chk2; middle\|S_TKc;	0.0	Weak: -31.505	cosmic_phi Y327C;M331T;A334T;H339Y;
8	nes_ord	O96017	327	YFYQMLLAVQYLHE	HHHHHHHHHHHHHH	c3-4	ORD	middle\|STKc_Chk2; middle\|S_TKc;	0.0	Medium: -34.757	cosmic_phi M331T;A334T;H339Y;
9	nes_ord	O96017	409	DCWSLGVILFICLSG	HHHHHHHHHHHHHHC	c1b-4	ORD	middle\|STKc_Chk2; middle\|S_TKc;	0.0	Strong: -43.712	cosmic_spacer W411C;G414E;G414R;
10	nes_diso	O96017	455	VSEKALDLVKKLLVVDP	CCHHHHHHHHHHCCCCH	c1c-AT-4	boundary	boundary\|STKc_Chk2; boundary\|S_TKc;	0.0	NA	cosmic_spacer S456L;E457K;L462I;K464N;K465E;V469M;
11	nes_diso	O96017	455	VSEKALDLVKKLLVVD	CCHHHHHHHHHHCCCC	c1a-AT-4	boundary	boundary\|STKc_Chk2; boundary\|S_TKc;	0.0	NA	cosmic_spacer S456L;E457K;L462I;K464N;K465E;V469M;
12	nes_diso	O96017	456	SEKALDLVKKLLVVDP	CHHHHHHHHHHCCCCH	c1d-4	boundary	boundary\|STKc_Chk2; boundary\|S_TKc;	0.0	NA	cosmic_phi_to_LIVMF E457K;L462I;K464N;K465E;V469M;
13	nes_diso	O96017	456	SEKALDLVKKLLVVD	CHHHHHHHHHHCCCC	c1b-4	boundary	boundary\|STKc_Chk2; boundary\|S_TKc;	0.0	NA	cosmic_spacer E457K;L462I;K464N;K465E;V469M;

candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
sequence: Hydrophobic positions are colored in red.
class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
loc_DISO: location of the segment with respect to the ordered/disordered regions
loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
beta: beta-strand content in the middle of the segment
Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.