HOME Exp-NES Cancer-NES Human-NES Documentation Contact
P08238_HS90B | Heat shock protein HSP 90-beta   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P08238 13 ETFAFQAEIAQLMSLII HHHHHHHHHHHHHHHHH c1c-4 boundary boundary|PTZ00272 superfamily; 0.0 Medium: -36.197 cosmic_spacer Medium|
2 nes_beta_diso P08238 79 PQERTLTLVDTGIGMTK CCCCEEEEEECCCCCCH c1c-AT-4 __ middle|PTZ00272 superfamily; 0.75 NA cosmic_spacer
3 nes_beta_diso P08238 80 QERTLTLVDTGIGMTK CCCEEEEEECCCCCCH c1d-4 boundary middle|PTZ00272 superfamily; 0.71 NA cosmic_phi_to_LIVMF
4 nes_diso P08238 117 LQAGADISMIGQFGVGF HHCCCCCCCHHHCCCCH c1c-AT-4 boundary middle|PTZ00272 superfamily; 0.0 NA cosmic_spacer
5 nes_diso P08238 119 AGADISMIGQFGVGF CCCCCCCHHHCCCCH c1b-4 boundary middle|PTZ00272 superfamily; 0.0 NA cosmic_spacer
6 nes_diso P08238 121 ADISMIGQFGVGFYSAY CCCCCHHHCCCCHHHHH c1cR-4 boundary middle|PTZ00272 superfamily; 0.0 NA cosmic_phi_to_LIVMF
7 nes_beta_diso P08238 134 YSAYLVAEKVVVIT HHHHEEEEEEEEEE c2-AT-4 boundary middle|PTZ00272 superfamily; 0.86 NA cosmic_spacer
8 nes_ord P08238 171 HGEPIGRGTKVILHLKE CCCCCCCCCEEEEEECC c1c-AT-4 ORD middle|PTZ00272 superfamily; 0.38 NA cosmic_spacer
9 nes_beta_ord P08238 312 WEDHLAVKHFSVEG CCCCCEEEEEEEEC c2-4 ORD middle|PTZ00272 superfamily; 0.71 NA
10 nes_beta_ord P08238 323 VEGQLEFRALLFIP EECEEEEEEEEEEC c2-4 ORD middle|PTZ00272 superfamily; 1.0 NA cosmic_spacer
11 nes_beta_ord P08238 349 KKNNIKLYVRRVFIMDS CCCCCEEEEEEEEEECC c1c-4 ORD middle|PTZ00272 superfamily; 0.88 NA cosmic_phi
12 nes_beta_ord P08238 349 KKNNIKLYVRRVFIMD CCCCCEEEEEEEEEEC c1a-4 ORD middle|PTZ00272 superfamily; 0.86 NA cosmic_spacer
13 nes_beta_ord P08238 351 NNIKLYVRRVFIMD CCCEEEEEEEEEEC c2-4 ORD middle|PTZ00272 superfamily; 1.0 NA cosmic_spacer
14 nes_ord P08238 425 NYKKFYEAFSKNLKLGI HHHHHHHHHHHHHEEEC c1c-4 ORD middle|PTZ00272 superfamily; 0.0 NA cosmic_spacer
15 nes_ord P08238 465 EMTSLSEYVSRMKE CCEEHHHHHHCCCC c3-4 ORD middle|PTZ00272 superfamily; 0.14 Bad: -29.215 cosmic_spacer
16 nes_ord P08238 506 RGFEVVYMTEPIDEYC CCCEEEEECCCCHHHH c1aR-4 ORD middle|PTZ00272 superfamily; 0.57 Bad: -26.42 cosmic_phi_to_LIVMF
17 nes_diso P08238 529 DGKSLVSVTKEGLELPE CCEEEEECCCCCCCCCC c1c-AT-4 boundary middle|PTZ00272 superfamily; 0.38 NA cosmic_spacer
18 nes_diso P08238 559 KFENLCKLMKEILD HHHHHHHHHHHHHH c3-4 boundary middle|PTZ00272 superfamily; 0.0 Weak: -31.717 Weak|
19 nes_diso P08238 567 MKEILDKKVEKVTISN HHHHHHHHHEEEEECC c1a-4 boundary middle|PTZ00272 superfamily; 0.29 Bad: -29.519 cosmic_phi_to_LIVMF
20 nes_ord P08238 646 KNDKAVKDLVVLLFET CCCHHHHHHHHHHHHH c1a-AT-4 ORD middle|PTZ00272 superfamily; 0.0 NA cosmic_spacer
21 nes_ord P08238 652 KDLVVLLFETALLSSG HHHHHHHHHHHHHHCC c1aR-4 ORD middle|PTZ00272 superfamily; 0.0 Weak: -30.134 cosmic_spacer
22 nes_diso P08238 676 HSNRIYRMIKLGLGIDE HHHHHHHHHHHHCCCCC c1c-4 boundary middle|PTZ00272 superfamily; 0.0 Weak: -32.997 cosmic_phi_to_LIVMF Weak|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.