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P08922_ROS1 | Proto-oncogene tyrosine-protein kinase ROS   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P08922 3 NIYCLIPKLVNFAT CEEECHHHHHHHHH c3-4 DISO 0.14 Medium: -33.44 Medium|
2 nes_diso P08922 11 LVNFATLGCLWISV HHHHHHHHHHHHHH c2-AT-5 DISO 0.0 NA
3 nes_diso P08922 34 LKSCVTNLGQQLDLGT HHHHHHHCCCCCCCCC c1d-4 boundary 0.0 Medium: -33.06 cosmic_spacer Medium|
4 nes_diso P08922 157 PLHPFTEYIFRVVW CCCCCCEEEEEEEE c3-4 boundary boundary|FN3; boundary|FN3; 0.57 NA cosmic_spacer
5 nes_diso P08922 164 YIFRVVWIFTAQLQLYS EEEEEEEEECCCCEEEC c1c-5 boundary boundary|FN3; boundary|FN3; boundary|FN3; 0.62 NA cosmic_spacer
6 nes_diso P08922 250 FYSTLPNTIYRFSIAA EEECCCCCEEEEEEEE c1a-4 boundary boundary|FN3; boundary|FN3; 0.43 Weak: -31.853 cosmic_spacer Weak|
7 nes_diso P08922 305 SLKHLVDEAHCLRLDA EHHHCCCHHHCCCCCC c1a-AT-5 __ boundary|FN3; boundary|FN3; 0.0 NA cosmic_spacer
8 nes_diso P08922 317 RLDAIYHNITGISVDV CCCCCCCCEEEEEEEE c1a-5 boundary boundary|FN3; 0.43 Bad: -28.549 cosmic_phi
9 nes_diso P08922 349 KAANMSDVSDLRIFY ECCCCCCCCCCEEEC c1b-4 boundary 0.0 Bad: -29.5 cosmic_phi
10 nes_diso P08922 373 SIDWLYQRMYFIMD EEEHHHHCCHHHHC c3-4 boundary 0.0 NA cosmic_spacer
11 nes_diso P08922 377 LYQRMYFIMDELVCVCD HHHCCHHHHCCEEEEEE c1c-4 boundary 0.12 NA cosmic_spacer
12 nes_diso P08922 380 RMYFIMDELVCVCD CCHHHHCCEEEEEE c3-4 boundary 0.29 NA cosmic_phi_to_LIVMF
13 nes_diso P08922 446 AVRIVESCTLKDFAIKP EEEEEECCCCCCEEECC c1c-AT-5 boundary 0.25 NA cosmic_spacer
14 nes_diso P08922 456 KDFAIKPQAKRIIYFND CCEEECCCCCEEEEEEC c1c-AT-4 boundary 0.38 NA cosmic_spacer
15 nes_diso P08922 478 MSTFLDGSASHLILPR EEEECCCCCEECCCCC c1a-AT-4 __ 0.29 NA cosmic_spacer
16 nes_diso P08922 519 QQDALSFNEFIVGC EECCCCCCCCCCCC c2-4 boundary 0.0 Weak: -31.709 cosmic_spacer Weak|
17 nes_diso P08922 530 VGCDLSHIEEFGFGN CCCCCCCCCCCCCCE c1b-4 boundary boundary|FN3; boundary|FN3; 0.0 Weak: -31.455 cosmic_spacer Weak|
18 nes_diso P08922 536 HIEEFGFGNLVIFG CCCCCCCCEEEEEC c2-5 boundary boundary|FN3; boundary|FN3; 0.29 Medium: -35.328 cosmic_phi_to_LIVMF Medium|
19 nes_diso P08922 578 KPPALAIGANVILISD CCCHHCCCCCEEEECC c1a-AT-4 boundary boundary|FN3; boundary|FN3; 0.14 NA cosmic_spacer
20 nes_diso P08922 587 NVILISDIIELFELGP CEEEECCCHHHCCCCC c1a-5 boundary middle|FN3; middle|FN3; 0.14 Bad: -24.109
21 nes_diso P08922 625 IFLNISGTMLNVPE EEECCCCCEEEECC c3-4 boundary boundary|FN3; middle|FN3; 0.29 Bad: -21.828 cosmic_phi_to_LIVMF
22 nes_diso P08922 635 NVPELQSAMKYKVSVRA EECCCCCCCEEEEEEEE c1c-5 boundary boundary|FN3; boundary|FN3; 0.38 Bad: -25.228 cosmic_spacer
23 nes_beta_diso P08922 781 IVTHVKLLVNDMVVDS EEEEEEEEEEEEEEEC c1a-5 boundary 1.0 NA cosmic_phi_to_LIVMF
24 nes_diso P08922 790 NDMVVDSVGGYLYWTT EEEEEECCCCEEEEEE c1aR-4 boundary 0.43 Bad: -28.549 cosmic_phi_to_LIVMF
25 nes_beta_ord P08922 829 SGKKVIALTLDLSD CCCEEEEEEEECCC c2-AT-4 ORD 1.0 NA cosmic_spacer
26 nes_beta_diso P08922 892 SGRLFWINGFRIIT CCCEEEEECCCCEE c2-4 boundary 0.71 NA cosmic_spacer
27 nes_diso P08922 917 VLEPARFNQFTIIQ ECCCCCCCEEEEEE c2-AT-5 boundary 0.29 NA cosmic_spacer
28 nes_diso P08922 954 SSFRIEGNASSFQILW HCEEEECCCCCEEEEE c1a-AT-4 boundary boundary|FN3; 0.29 NA cosmic_spacer
29 nes_beta_diso P08922 975 VDWGVVFYSVEFSA CCCCCEEEEEEECC c2-4 boundary boundary|FN3; 0.71 NA
30 nes_diso P08922 1004 TVEGLEPYALFNLSVTP EECCCCCCCEEEEEEEE c1c-AT-5 boundary boundary|FN3; boundary|FN3; boundary|FN3; 0.38 NA cosmic_spacer
31 nes_diso P08922 1102 IAVNVTPSVMSFQLEG EEEECCCCEEEEEEEC c1a-4 boundary boundary|FN3; middle|FN3; 0.43 Medium: -33.344 cosmic_spacer Medium|
32 low complexity P08922 1149 EINPFPHLITLLGN CCCCCCEEEEEECC c3-4 boundary boundary|FN3; boundary|FN3; 0.57 NA cosmic_spacer
33 nes_beta_diso P08922 1156 LITLLGNKIVFLDMDQ EEEEECCEEEEECCCC c1a-5 boundary boundary|FN3; boundary|FN3; 0.71 NA cosmic_spacer
34 nes_diso P08922 1214 SSELFQDSLVFDITVIT CCHHEECCCCCCCEEEE c1c-4 boundary 0.25 Bad: -28.321
35 nes_diso P08922 1218 FQDSLVFDITVITIDW EECCCCCCCEEEEEEC c1a-4 boundary 0.29 Bad: -26.832
36 nes_diso P08922 1220 DSLVFDITVITIDW CCCCCCCEEEEEEC c2-4 boundary 0.43 Bad: -25.263
37 nes_diso P08922 1226 ITVITIDWISRHLYFAL CEEEEEECHHCCEEEEE c1c-AT-4 boundary 0.38 NA cosmic_spacer
38 nes_diso P08922 1227 TVITIDWISRHLYFAL EEEEEECHHCCEEEEE c1d-5 boundary 0.29 NA cosmic_phi_to_LIVMF
39 nes_beta_diso P08922 1245 SQNGMQVFDVDLEH CCCCEEEEEEECCC c2-4 boundary 0.86 NA cosmic_spacer
40 nes_diso P08922 1328 SCNVTEFELSGAMAIDT CCCCCCCEECCCEEEEC c1c-AT-4 boundary 0.25 NA cosmic_spacer
41 nes_diso P08922 1376 VPAMLAGKTLVSLTVDG CHHHHCCCCCEEEEECC c1c-AT-4 boundary 0.25 NA cosmic_spacer
42 nes_diso P08922 1377 PAMLAGKTLVSLTVDG HHHHCCCCCEEEEECC c1a-AT-4 boundary 0.29 NA cosmic_spacer
43 nes_diso P08922 1452 VEPTILNATNTSLTIRL CCCEEEEECCCEEEEEC c1c-AT-4 boundary 0.62 NA cosmic_spacer
44 nes_diso P08922 1506 RILEFQDSIALIED EEEEECCCEEEECC c3-4 boundary 0.57 NA cosmic_phi_to_LIVMF
45 nes_beta_diso P08922 1519 DLQPFSTYMIQIAVKN CCCCCCEEEEEEEEEE c1a-5 boundary 0.71 NA cosmic_spacer
46 nes_diso P08922 1591 VRYQLAISHLALIP EEEEEEHHCCCCCC c2-4 boundary 0.43 NA cosmic_spacer
47 nes_diso P08922 1676 WKAPLNVNLIRFWV ECCCCCCCCEEEEE c2-4 DISO boundary|FN3; boundary|FN3; 0.14 Bad: -27.885 cosmic_spacer
48 nes_diso P08922 1678 APLNVNLIRFWVELQK CCCCCCCEEEEEEEEC c1aR-4 __ boundary|FN3; boundary|FN3; 0.57 Bad: -24.865
49 nes_beta_diso P08922 1680 LNVNLIRFWVELQKWK CCCCCEEEEEEEECCC c1aR-4 boundary middle|FN3; boundary|FN3; 0.86 NA
50 nes_diso P08922 1715 NITNLQPYTSYNVRVVV EECCCCCCCEEEEEEEE c1c-AT-5 boundary boundary|FN3; boundary|FN3; 0.38 NA
51 nes_beta_diso P08922 1719 LQPYTSYNVRVVVVYK CCCCCEEEEEEEEEEE c1a-AT-4 boundary boundary|FN3; boundary|FN3; boundary|FN3; 0.86 NA
52 nes_diso P08922 1818 KSKNLKGIFQFRVVA CCCCCCCEEEEEEEE c1b-4 boundary boundary|FN3; 0.57 Weak: -30.515 cosmic_spacer Weak|
53 nes_beta_diso P08922 1824 GIFQFRVVAANNLGFGE CEEEEEEEEEECCCCCC c1c-AT-5 boundary boundary|FN3; 0.88 NA cosmic_spacer
54 nes_TM P08922 1858 PETSFILTIIVGIFLVV CCCCCCCHHHHHHHHHH c1c-4 boundary boundary|FN3; 0.0 NA cosmic_spacer
55 low complexity P08922 1859 ETSFILTIIVGIFLVVT CCCCCCHHHHHHHHHHH c1c-4 boundary boundary|FN3; 0.0 NA cosmic_phi
56 nes_TM P08922 1859 ETSFILTIIVGIFLVV CCCCCCHHHHHHHHHH c1a-4 boundary boundary|FN3; 0.0 NA cosmic_phi
57 low complexity P08922 1860 TSFILTIIVGIFLVVTI CCCCCHHHHHHHHHHHH c1c-4 boundary boundary|FN3; 0.0 NA cosmic_spacer
58 low complexity P08922 1860 TSFILTIIVGIFLVVT CCCCCHHHHHHHHHHH c1a-4 boundary boundary|FN3; 0.0 NA cosmic_spacer
59 low complexity P08922 1860 TSFILTIIVGIFLVVT CCCCCHHHHHHHHHHH c1aR-5 boundary boundary|FN3; 0.0 NA cosmic_spacer
60 low complexity P08922 1863 ILTIIVGIFLVVTIPL CCHHHHHHHHHHHHHH c1a-5 boundary boundary|FN3; 0.0 NA
61 low complexity P08922 1869 GIFLVVTIPLTFVWHR HHHHHHHHHHHHHHHH c1aR-4 boundary boundary|FN3; 0.0 Bad: -23.631
62 low complexity P08922 1870 IFLVVTIPLTFVWH HHHHHHHHHHHHHH c3-4 boundary boundary|FN3; 0.0 Bad: -25.178
63 nes_diso P08922 1905 ELAELRGLAAGVGLAN HHHHHHCCCCCCCCCC c1a-AT-5 DISO 0.0 NA cosmic_spacer
64 nes_diso P08922 1905 ELAELRGLAAGVGLAN HHHHHHCCCCCCCCCC c1d-5 DISO 0.0 NA cosmic_spacer
65 nes_diso P08922 1959 VYEGTAVDILGVGS EEEEEEECCCCCCC c2-AT-4 boundary boundary|Pkinase_Tyr; boundary|PTKc_c-ros; 0.57 NA cosmic_spacer
66 nes_diso P08922 2042 RMATFYGPLLTLVDLVD CCCCCCCCCCCHHHHHH c1c-5 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Bad: -14.173 cosmic_phi_to_LIVMF
67 nes_diso P08922 2042 RMATFYGPLLTLVD CCCCCCCCCCCHHH c3-4 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Bad: -26.062 cosmic_phi_to_LIVMF
68 nes_diso P08922 2046 FYGPLLTLVDLVDLCV CCCCCCCHHHHHHHHH c1a-4 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Bad: -29.791 cosmic_spacer
69 nes_diso P08922 2049 PLLTLVDLVDLCVDISK CCCCHHHHHHHHHHHHH c1c-5 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Medium: -36.298 cosmic_phi_to_LIVMF Medium|
70 nes_diso P08922 2050 LLTLVDLVDLCVDI CCCHHHHHHHHHHH c2-5 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Bad: -29.628 cosmic_spacer
71 nes_diso P08922 2052 TLVDLVDLCVDISKGC CHHHHHHHHHHHHHHH c1aR-4 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Weak: -30.064 cosmic_spacer Weak|
72 nes_diso P08922 2064 SKGCVYLERMHFIH HHHHHHHHHCCCCC c2-4 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Bad: -28.463 cosmic_phi_to_LIVMF
73 nes_beta_diso P08922 2094 SPRIVKIGDFGLAR CCCEEEEEECCCCC c2-4 boundary middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.86 NA cosmic_spacer
74 low complexity P08922 2146 SFGILIWEILTLGH HHHHHHHHHHHCCC c3-4 ORD middle|Pkinase_Tyr; middle|PTKc_c-ros; 0.0 Weak: -32.718 cosmic_phi_to_LIVMF
75 nes_diso P08922 2207 TFHRIQDQLQLFRN CHHHHHHHHHHHHH c3-4 boundary boundary|Pkinase_Tyr; boundary|PTKc_c-ros; 0.0 Bad: -24.249 cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.