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P11274_BCR | Breakpoint cluster region protein   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P11274 52 ERFRMIYLQTLLAKEK HHHHHHHHHHHHHHHH c1aR-4 DISO boundary|Bcr-Abl_Oligo; 0.0 NA cosmic_phi
2 nes_diso P11274 150 SVAALRSNFERIRK CHHHHHHHHCCHHC c3-4 DISO boundary|Haemolytic superfamily; 0.0 Bad: -27.487 cosmic_phi
3 nes_diso P11274 168 PGADAEKPFYVNVEFHH CCCCCCCCCCEEEEEEE c1c-AT-4 DISO boundary|Haemolytic superfamily; 0.25 NA cosmic_spacer
4 nes_diso P11274 394 HCPVVVSEATIVGVRK CCCCEECCCEECCCCC c1a-AT-4 DISO 0.57 NA cosmic_spacer
5 nes_diso P11274 510 EETYLSHLEALLLPM HHHHHHHHHHHHCCC c1b-4 DISO boundary|RhoGEF; 0.0 Bad: -29.502 cosmic_phi_to_LIVMF
6 nes_diso P11274 535 QPVLTSQQIETIFFKV CCCCCHHHHHHHHHHH c1a-AT-4 boundary middle|RhoGEF; 0.0 NA
7 nes_diso P11274 576 RVGDLFQKLASQLGVYR CHHHHHHHHHHHHCHHH c1c-5 boundary middle|RhoGEF; 0.0 Bad: -27.935 cosmic_phi_to_LIVMF
8 nes_diso P11274 643 LYKPVDRVTRSTLVLHD HCCCCCHHHCCHHHHHH c1c-AT-4 boundary middle|RhoGEF; 0.0 NA
9 nes_diso P11274 725 LRHVFLFTDLLLCT CEEEEECCCCEEEE c2-4 boundary middle|PH_BCR_vertebrate; 0.43 Bad: -29.44 cosmic_spacer
10 nes_diso P11274 753 CKWYIPLTDLSFQM EEEECCHHHCEEEC c2-4 boundary middle|PH_BCR_vertebrate; 0.14 Medium: -36.904 cosmic_spacer Medium|
11 nes_diso P11274 783 ELDALKIKISQIKN HHHHHHHHHHHHHH c3-4 DISO middle|PH_BCR_vertebrate; 0.0 Bad: -28.65 cosmic_spacer
12 nes_diso P11274 868 CFRSFSLTSVELQM HHHCCCCCHHHHHH c2-5 DISO boundary|PH_BCR_vertebrate; 0.0 Medium: -33.857 cosmic_spacer Medium|
13 nes_diso P11274 870 RSFSLTSVELQMLTNS HCCCCCHHHHHHHHHC c1aR-4 DISO boundary|PH_BCR_vertebrate; 0.0 Weak: -32.969 cosmic_spacer Weak|
14 nes_diso P11274 905 ESPGLYGFLNVIVHS CCCCCCCEEEEEEEE c1b-4 boundary boundary|PH_BCR_vertebrate; boundary|C2; boundary|C2_ABR; 0.57 NA cosmic_phi_to_LIVMF
15 nes_diso P11274 931 CTLEVDSFGYFVNKAK EEEEECCCCCCEEECC c1aR-4 boundary boundary|C2; boundary|C2_ABR; 0.14 Bad: -29.909
16 nes_diso P11274 1016 QRTVIAMNGIEVKL HCEEEECCCCEEEE c2-4 DISO boundary|C2; boundary|C2_ABR; 0.43 Bad: -24.069 cosmic_spacer
17 nes_diso P11274 1018 TVIAMNGIEVKLSVKF EEEECCCCEEEEEEEE c1aR-4 DISO boundary|C2; boundary|C2_ABR; boundary|RhoGAP_Bcr; 0.43 NA
18 nes_diso P11274 1045 SRKQTGVFGVKIAV CCCCCCCCCEEHHH c2-AT-4 boundary boundary|C2; boundary|C2_ABR; boundary|RhoGAP_Bcr; 0.14 NA
19 nes_diso P11274 1090 RVSGVATDIQALKA EECCCHHHHHHHHH c3-4 boundary middle|RhoGAP_Bcr; 0.0 Strong: -41.202 Strong|
20 nes_diso P11274 1108 NNKDVSVMMSEMDVNA CCHHHHHCCCHHHHHH c1a-4 boundary middle|RhoGAP_Bcr; 0.0 Medium: -36.068 Medium|
21 nes_diso P11274 1110 KDVSVMMSEMDVNA HHHHHCCCHHHHHH c2-4 boundary middle|RhoGAP_Bcr; 0.0 Bad: -29.796
22 nes_diso P11274 1117 SEMDVNAIAGTLKLYF CHHHHHHHHHHHHHHH c1aR-4 boundary middle|RhoGAP_Bcr; 0.0 Bad: -27.136 cosmic_spacer
23 nes_diso P11274 1128 LKLYFRELPEPLFTDE HHHHHHCCCCCCCCHH c1aR-4 boundary middle|RhoGAP_Bcr; 0.0 Bad: -23.831 cosmic_spacer
24 nes_ord P11274 1140 FTDEFYPNFAEGIALSD CCHHHHHHHHHHHHCCC c1c-4 ORD middle|RhoGAP_Bcr; 0.0 Weak: -32.432
25 nes_diso P11274 1175 NLLTFLFLLDHLKRVA HHHHHHHHHHHHHHHH c1aR-5 boundary middle|RhoGAP_Bcr; 0.0 Weak: -30.586 cosmic_spacer Weak|
26 low complexity P11274 1175 NLLTFLFLLDHLKR HHHHHHHHHHHHHH c3-4 boundary middle|RhoGAP_Bcr; 0.0 Bad: -23.753 cosmic_spacer
27 nes_diso P11274 1178 TFLFLLDHLKRVAE HHHHHHHHHHHHHH c3-4 boundary middle|RhoGAP_Bcr; 0.0 Medium: -35.294 cosmic_spacer Medium|
28 nes_diso P11274 1196 NKMSLHNLATVFGPTL CCCCHHHCHHHHCCCC c1aR-4 boundary middle|RhoGAP_Bcr; 0.0 Bad: -23.686 cosmic_spacer
29 nes_diso P11274 1239 VMSQVQVLLYFLQLEA HHHHHHHHHHHHHCCC c1a-5 boundary boundary|RhoGAP_Bcr; 0.0 Medium: -39.173 Medium|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.