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P13796_PLSL | Plastin-2   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P13796 10 EMMELREAFAKVDT HHHHHHHHHHCCCC c3-4 boundary boundary|EFh; 0.0 Medium: -37.771 cosmic_spacer Medium|
2 nes_diso P13796 27 GYISFNELNDLFKAAC CCCCHHHHHHHHHHCC c1aR-4 boundary boundary|EFh; 0.0 Bad: -27.235 cosmic_spacer
3 nes_diso P13796 34 LNDLFKAACLPLPG HHHHHHHCCCCCCC c2-AT-4 boundary middle|EFh; 0.0 NA cosmic_spacer
4 nes_diso P13796 67 GRISFDEFIKIFHGLK CCCCHHHHHHHHHHCC c1aR-5 boundary boundary|EFh; 0.0 Bad: -26.663 cosmic_spacer
5 nes_diso P13796 70 SFDEFIKIFHGLKS CHHHHHHHHHHCCC c3-4 boundary boundary|EFh; 0.0 Strong: -41.714 cosmic_spacer Strong|
6 nes_ord P13796 149 NTNDLFNAVGDGIVLCK CHHHHHHHHHCCHHHHH c1c-4 ORD middle|CH; 0.0 Weak: -30.424 cosmic_phi_to_LIVMF
7 nes_ord P13796 158 GDGIVLCKMINLSVPD HCCHHHHHHHHHHCCC c1a-4 ORD middle|CH; 0.0 Weak: -31.394 cosmic_phi
8 nes_ord P13796 182 KKKLTPFTIQENLNLAL CCCCCHHHHHHHHHHHH c1c-AT-4 ORD middle|CH; 0.0 NA
9 nes_ord P13796 186 TPFTIQENLNLALNSAS CHHHHHHHHHHHHHHHH c1cR-4 ORD middle|CH; 0.0 NA
10 nes_ord P13796 223 LVLGLLWQVIKIGLFA HHHHHHHHHHHHHHHC c1a-5 ORD boundary|CH; 0.0 Bad: -29.452 cosmic_spacer
11 nes_diso P13796 314 GVPAVVIDMSGLRE CCCCCCCCCCCCCC c3-4 boundary middle|CH; 0.0 Bad: -24.761 cosmic_spacer
12 nes_diso P13796 360 PKLNLAFIANLFNRYP HHHHHHHHHHHHHHCC c1aR-4 boundary boundary|CH; boundary|CH; 0.0 Medium: -34.195 cosmic_spacer Medium|
13 nes_diso P13796 396 EERTFRNWMNSLGVNP HHHHHHHHHHHCCCCH c1a-4 boundary boundary|CH; boundary|CH; 0.0 Weak: -30.506 cosmic_phi_to_LIVMF Weak|
14 nes_diso P13796 412 RVNHLYSDLSDALVIFQ HHHHHHHCHHHHHHHHH c1c-5 boundary boundary|CH; boundary|CH; 0.0 Weak: -31.389 cosmic_spacer Weak|
15 nes_diso P13796 416 LYSDLSDALVIFQLYE HHHCHHHHHHHHHHHH c1a-4 boundary boundary|CH; 0.0 Bad: -29.83 cosmic_spacer
16 nes_diso P13796 421 SDALVIFQLYEKIKVPV HHHHHHHHHHHHHCCCC c1c-4 boundary middle|CH; 0.0 Bad: -19.738 cosmic_phi_to_LIVMF
17 nes_diso P13796 422 DALVIFQLYEKIKVPV HHHHHHHHHHHHCCCC c1aR-4 boundary middle|CH; 0.0 Weak: -30.025 cosmic_spacer Weak|
18 nes_diso P13796 467 GKNQAKFSLVGIGG HHHHCCCEECCCCC c2-AT-4 __ middle|CH; 0.29 NA cosmic_spacer
19 nes_ord P13796 488 RTLTLALIWQLMRRYT HHHHHHHHHHHHHHHH c1aR-4 ORD boundary|CH; boundary|CH; 0.0 Weak: -32.686 cosmic_phi_to_LIVMF
20 nes_ord P13796 585 YAISMARKIGARVYALP HHHHHHHHHCCEEECCH c1cR-5 ORD middle|CH; 0.12 NA cosmic_spacer
21 nes_ord P13796 589 MARKIGARVYALPEDLVE HHHHHCCEEECCHHHHCC c4-4 ORD boundary|CH; 0.38 Bad: -21.101 cosmic_spacer
22 nes_ord P13796 596 RVYALPEDLVEVNPKMVM EEECCHHHHCCCCHHHHH c4-5 ORD boundary|CH; 0.0 Medium: -36.262 cosmic_phi_to_LIVMF
23 nes_ord P13796 596 RVYALPEDLVEVNP EEECCHHHHCCCCH c3-4 ORD boundary|CH; 0.0 Medium: -38.788 cosmic_spacer
24 nes_diso P13796 609 PKMVMTVFACLMGKGM HHHHHHHHHHHHHHHC c1aR-4 boundary boundary|CH; 0.0 Weak: -32.675 cosmic_phi_to_LIVMF Weak|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.