P21333 | Filamin-A

P21333_FLNA | Filamin-A ProteinAtlas Cosmic Proviz Swissmodel

Cosmic Cancer Gene Census (CGC)

#	candidates	uniprotID	start#	sequence	secondary	class	loc_DISO	loc_CDD	beta	Ebind	Cosmic	TOTALscore(Ebind\|Stars)
1	nes_diso	P21333	56	HLKCVSKRIANLQT	HHCCCCCEECCHHH	c3-4	boundary	boundary\|CH;	0.29	Medium: -33.963	cosmic_spacer R63S;	Medium\|
2	nes_diso	P21333	63	RIANLQTDLSDGLRLIA	EECCHHHCCCCHHHHHH	c1c-5	boundary	boundary\|CH;	0.0	Medium: -38.162	cosmic_spacer T69M;S72R;D73Y;R76W;	Medium\|
3	nes_diso	P21333	67	LQTDLSDGLRLIALLE	HHHCCCCHHHHHHHHH	c1a-4	boundary	middle\|CH;	0.0	Medium: -35.286	cosmic_spacer T69M;S72R;D73Y;R76W;	Medium\|
4	nes_diso	P21333	73	DGLRLIALLEVLSQKK	CHHHHHHHHHHHCCCC	c1aR-4	boundary	middle\|CH;	0.0	Medium: -36.199	cosmic_spacer R76W;E82G;	Medium\|
5	nes_diso	P21333	98	TFRQMQLENVSVAL	CCHHHHHHHHHHHH	c2-5	boundary	middle\|CH;	0.0	Medium: -37.553	cosmic_spacer R100S;A110V;	Medium\|
6	nes_diso	P21333	100	RQMQLENVSVALEFLD	HHHHHHHHHHHHHHHH	c1aR-5	boundary	middle\|CH;	0.0	Medium: -33.773	cosmic_phi_to_LIVMF A110V;L111F;	Medium\|
7	nes_diso	P21333	103	QLENVSVALEFLDR	HHHHHHHHHHHHHH	c3-4	boundary	middle\|CH;	0.0	Bad: -27.235	cosmic_phi_to_LIVMF A110V;L111F;
8	nes_diso	P21333	126	SKAIVDGNLKLILGLIW	HHHHCCCCHHHHHHHHH	c1c-4	boundary	boundary\|CH;	0.0	Bad: -28.686	cosmic_spacer D131N;
9	nes_diso	P21333	134	LKLILGLIWTLILHYS	HHHHHHHHHHHHHHHH	c1aR-4	boundary	boundary\|CH; boundary\|CH;	0.0	NA	cosmic_spacer W142R;L144M;H147Y;
10	nes_diso	P21333	393	PSGNIANKTTYFEIFT	CCCCCCCCCEEEEEEC	c1a-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.29	NA
11	nes_diso	P21333	445	SYQPTMEGVHTVHVTF	EEECCCCEEEEEEEEE	c1a-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.57	NA	cosmic_spacer T455A;
12	nes_beta_diso	P21333	446	YQPTMEGVHTVHVTF	EECCCCEEEEEEEEE	c1b-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.71	NA	cosmic_spacer T455A;
13	nes_diso	P21333	541	EYYPMVPGTYIVTITW	EEECCCCEEEEEEEEE	c1a-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.57	NA
14	nes_diso	P21333	598	VVEAIGDDVGTLGFSV	EEECCCCCCCCEEEEE	c1a-5	boundary	boundary\|IG_FLMN; middle\|IG_FLMN;	0.0	Medium: -38.089	cosmic_phi_to_LIVMF A601V;G603R;G603W;D605N;V606M;	Medium\|
15	nes_diso	P21333	810	CAPGVVGPAEADIDFDI	CCCCCCCCCCCEEEEEE	c1c-AT-4	boundary	middle\|IG_FLMN;	0.12	NA	cosmic_spacer E819K;D821N;D825N;
16	nes_diso	P21333	965	VSPSLDLSKIKVSG	ECCCCCHHHEEEEC	c2-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.14	Bad: -28.263
17	nes_diso	P21333	972	SKIKVSGLGEKVDVGK	HHEEEECCCCCCCCCC	c1d-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.29	Bad: -27.576	cosmic_phi_to_LIVMF V985I;
18	nes_diso	P21333	1170	LERATAGEVGQFQVDC	CCCCCCCCCEEEEEEC	c1a-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.29	NA	cosmic_spacer G1179D;V1183L;
19	nes_diso	P21333	1220	TYIPLCPGAYTVTIKY	EECCCCCEEEEEEEEE	c1a-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.57	NA	cosmic_spacer Y1221S;G1227R;Y1229N;I1233M;
20	nes_diso	P21333	1266	EGQGVFREATTEFSVDA	CCCCCCCCCCEEEEEEC	c1c-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.25	NA	cosmic_spacer R1272C;R1272H;
21	nes_diso	P21333	1267	GQGVFREATTEFSVDA	CCCCCCCCCEEEEEEC	c1a-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.29	NA	cosmic_spacer R1272C;R1272H;
22	nes_diso	P21333	1571	DAKDAGEGLLAVQITD	ECCCCCCCCEEEEEEC	c1a-AT-4	boundary	boundary\|IG_FLMN; middle\|IG_FLMN;	0.29	NA	cosmic_spacer G1578C;I1584M;
23	nes_diso	P21333	1774	ERPLVGVNGLDVTS	CCCCCCCCCCCCCC	c2-4	DISO	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.0	Bad: -25.685	cosmic_spacer N1781Y;
24	nes_beta_ord	P21333	1833	APSEAGLHEMDIRY	CCCCCEEEEEEEEE	c2-AT-4	ORD	boundary\|IG_FLMN;	0.71	NA
25	nes_diso	P21333	1954	GDDSMRMSHLKVGS	CCCCCCCCCCCCCC	c2-4	boundary	boundary\|IG_FLMN;	0.0	Bad: -29.981	cosmic_spacer_Pro M1958I;M1958L;R1959H;S1961P;V1965I;
26	nes_beta_diso	P21333	2203	VPAEMGTHTVSVKY	ECCCCEEEEEEEEE	c2-AT-4	boundary		0.71	NA	cosmic_spacer V2214M;
27	nes_diso	P21333	2343	SGLKVNQPASFAVSLNG	CCCCCCCCEEEEEECCC	c1c-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.5	NA
28	nes_beta_ord	P21333	2395	RENGVYLIDVKFNG	CCCEEEEEEEEECC	c2-4	ORD	boundary\|IG_FLMN; boundary\|IG_FLMN;	1.0	NA	cosmic_phi_to_LIVMF G2398D;V2404I;
29	nes_diso	P21333	2553	GPADASKVVAKGLGLSK	CCCCHHHEEEECCCCCC	c1c-AT-4	boundary	boundary\|IG_FLMN; boundary\|IG_FLMN;	0.5	NA	cosmic_spacer A2557T;S2558R;
30	nes_diso	P21333	2581	DCSKAGNNMLLVGVHG	ECCCCCCCCEEEEEEC	c1a-AT-4	boundary	middle\|IG_FLMN;	0.29	NA	cosmic_spacer G2593V;
31	nes_ord	P21333	2605	LVKHVGSRLYSVSY	EEEECCCCEEEEEE	c3-4	ORD	middle\|IG_FLMN;	0.43	Medium: -37.602	cosmic_phi_to_LIVMF V2606L;

candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
sequence: Hydrophobic positions are colored in red.
class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
loc_DISO: location of the segment with respect to the ordered/disordered regions
loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
beta: beta-strand content in the middle of the segment
Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.