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P22455_FGFR4 | Fibroblast growth factor receptor 4   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 low complexity P22455 1 XMRLLLALLGVLLSVPG CHHHHHHHHHHHHCCCC c1c-5-Nt DISO 0.0 Medium: -36.815
2 low complexity P22455 1 XMRLLLALLGVLLS CHHHHHHHHHHHHC c3-4-Nt DISO 0.0 Medium: -36.545
3 nes_diso P22455 3 LLLALLGVLLSVPGPP HHHHHHHHHHHCCCCC c1aR-4 DISO 0.0 Bad: -27.481
4 low complexity P22455 3 LLLALLGVLLSVPG HHHHHHHHHHHCCC c3-4 DISO 0.0 Weak: -31.442
5 nes_diso P22455 16 GPPVLSLEASEEVELEP CCCCCCCCCCCCCCCCC c1c-AT-4 boundary boundary|IGc2; 0.0 NA
6 nes_ord P22455 88 IASFLPEDAGRYLCLAR ECCCCHHHCEEEEEEEE c1c-AT-4 ORD boundary|IGc2; 0.38 NA cosmic_spacer
7 nes_beta_diso P22455 104 RGSMIVLQNLTLIT ECCCEEEEEEEEEE c2-4 boundary boundary|IGc2; 0.86 NA
8 nes_ord P22455 255 LPANTTAVVGSDVELLC CCCCCEEECCCCEEEEE c1c-AT-4 ORD boundary|Ig superfamily; boundary|Ig3_FGFR-2; 0.38 NA cosmic_spacer
9 nes_beta_ord P22455 277 AQPHIQWLKHIVING CCCCEEEEEEEEECC c1b-4 ORD boundary|Ig3_FGFR-2; 1.0 NA cosmic_phi
10 nes_TM P22455 366 RYTDIILYASGSLALAV CCCCEEEHHHHHHHHHH c1c-AT-4 boundary boundary|Ig3_FGFR-2; 0.38 NA cosmic_spacer
11 nes_TM P22455 374 ASGSLALAVLLLLA HHHHHHHHHHHHHH c2-4 boundary boundary|Ig3_FGFR-2; 0.0 Medium: -35.998 cosmic_spacer
12 nes_TM P22455 378 LALAVLLLLAGLYRGQ HHHHHHHHHHHHHHCC c1aR-4 boundary boundary|Ig3_FGFR-2; 0.0 Strong: -41.926 cosmic_spacer
13 nes_diso P22455 441 SGPALLAGLVSLDLPL CCCCCCCCCCCCCCCC c1a-4 boundary boundary|PKc_like superfamily; boundary|Pkinase_Tyr; 0.0 Weak: -31.355 cosmic_phi_to_LIVMF Weak|
14 nes_beta_diso P22455 478 FGQVVRAEAFGMDP CCEEEEEEEECCCC c2-AT-4 boundary middle|PKc_like superfamily; boundary|Pkinase_Tyr; 1.0 NA cosmic_spacer
15 nes_ord P22455 513 DLADLVSEMEVMKLIG HHHHHHHHHHHHHHHC c1a-5 ORD middle|PKc_like superfamily; middle|Pkinase_Tyr; 0.0 Medium: -37.142 cosmic_spacer
16 nes_ord P22455 609 IHRDLAARNVLVTE CCHHHHHCCEEECC c2-AT-4 ORD middle|PKc_like superfamily; middle|Pkinase_Tyr; 0.14 NA cosmic_spacer
17 nes_ord P22455 622 EDNVMKIADFGLAR CCCEEEHHHHCCCC c2-4 ORD middle|PKc_like superfamily; middle|Pkinase_Tyr; 0.43 NA cosmic_spacer
18 low complexity P22455 674 SFGILLWEIFTLGG HHHHHHHHHHHCCC c3-4 ORD middle|PKc_like superfamily; middle|Pkinase_Tyr; 0.0 NA cosmic_spacer
19 nes_diso P22455 735 TFKQLVEALDKVLLAV CHHHHHHHHHHHHHHC c1a-5 boundary boundary|PKc_like superfamily; boundary|Pkinase_Tyr; 0.0 Strong: -42.716 cosmic_spacer Strong|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.