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P22681_CBL | E3 ubiquitin-protein ligase CBL   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P22681 118 FMENLMKKTKQTISLFK HHHHHHHHHHHHHHHHH c1c-AT-5 boundary middle|Cbl_N; 0.0 NA cosmic_spacer
2 nes_diso P22681 150 NLTKLSLIFSHMLA HHHHHHHHHHHHHH c3-4 boundary boundary|Cbl_N; boundary|Cbl_N2; 0.0 Strong: -41.758 cosmic_spacer Strong|
3 nes_diso P22681 154 LSLIFSHMLAELKGIF HHHHHHHHHHHHHHHC c1aR-5 boundary boundary|Cbl_N; boundary|Cbl_N2; 0.0 Medium: -35.18 cosmic_spacer Medium|
4 nes_diso P22681 157 IFSHMLAELKGIFP HHHHHHHHHHHHCC c3-4 boundary boundary|Cbl_N; boundary|Cbl_N2; 0.0 Weak: -31.547 cosmic_spacer Weak|
5 nes_diso P22681 211 EVHPISSGLEAMALKS HHCCCCCCHHHHHHHH c1a-5 boundary boundary|Cbl_N; middle|Cbl_N2; 0.0 Bad: -19.206 cosmic_spacer
6 nes_diso P22681 232 CNDYISVFEFDIFT CCCCCCHHEEEHHH c2-4 boundary boundary|Cbl_N2; boundary|SH2_Cbl-b_TKB; 0.29 Weak: -30.702 cosmic_spacer Weak|
7 nes_diso P22681 237 SVFEFDIFTRLFQPWS CHHEEEHHHHHCCCHH c1aR-4 boundary boundary|Cbl_N2; boundary|SH2_Cbl-b_TKB; 0.29 Bad: -27.355 cosmic_spacer
8 nes_diso P22681 324 LFQALIDGFREGFYLFP HHHHHHHCCCCCCCCCC c1c-5 boundary boundary|SH2_Cbl-b_TKB; 0.0 Medium: -37.844 cosmic_spacer Medium|
9 nes_diso P22681 328 LIDGFREGFYLFPD HHHCCCCCCCCCCC c3-4 boundary boundary|SH2_Cbl-b_TKB; boundary|RING-HC_Cbl-b; 0.0 Bad: -27.567 cosmic_spacer
10 nes_diso P22681 366 EQYELYCEMGSTFQLCK HHHHHHCCCCCHHHCCH c1c-4 DISO boundary|SH2_Cbl-b_TKB; boundary|RING-HC_Cbl-b; 0.0 Bad: -28.709 cosmic_phi
11 low complexity P22681 492 SLPPVPPRLDLLPQRVCV CCCCCCCCCCCCCCCCCC c4-5 DISO 0.0 Bad: -28.173 cosmic_phi_to_LIVMF
12 low complexity P22681 492 SLPPVPPRLDLLPQ CCCCCCCCCCCCCC c3-4 DISO 0.0 Weak: -31.443 cosmic_phi_to_LIVMF
13 nes_diso P22681 630 PRPDVPRLGSTFSLDT CCCCCCCCCCCCCCCC c1d-4 DISO 0.0 Bad: -29.242
14 nes_diso P22681 883 NNIEMAKNILREFVSIS HHHHHHHHHHHHHCCCC c1cR-5 boundary 0.0 NA cosmic_phi_to_LIVMF
15 nes_diso P22681 884 NIEMAKNILREFVSISS HHHHHHHHHHHHCCCCC c1c-AT-5 boundary 0.0 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.