P30279 | G1/S-specific cyclin-D2

P30279_CCND2 | G1/S-specific cyclin-D2 ProteinAtlas Cosmic Proviz Swissmodel

Cosmic Cancer Gene Census (CGC)

#	candidates	uniprotID	start#	sequence	secondary	class	loc_DISO	loc_CDD	beta	Ebind	Cosmic	TOTALscore(Ebind\|Stars)
1	nes_diso	P30279	77	FPLAMNYLDRFLAGVP	HHHHHHHHHHHHHCCC	c1aR-5	boundary	middle\|Cyclin_N; boundary\|CYCLIN;	0.0	Weak: -30.995	cosmic_phi_to_LIVMF R86C;F87L;V91F;	Weak\|
2	nes_diso	P30279	80	AMNYLDRFLAGVPT	HHHHHHHHHHCCCC	c3-4	boundary	middle\|Cyclin_N; boundary\|CYCLIN;	0.0	Bad: -28.622	cosmic_phi_to_LIVMF R86C;F87L;V91F;
3	nes_diso	P30279	94	PKSHLQLLGAVCMFL	CHHHHHHHHHHHHHH	c1b-4	boundary	middle\|Cyclin_N; middle\|CYCLIN;	0.0	Bad: -29.974	cosmic_phi_to_LIVMF L100R;A103T;V104F;
4	nes_diso	P30279	114	ETSPLTAEKLCIYT	CCCCCCHHHHHHCC	c2-AT-4	boundary	middle\|Cyclin_N; boundary\|CYCLIN;	0.0	NA	cosmic_spacer P117S;C124Y;
5	nes_ord	P30279	140	ELVVLGKLKWNLAAVT	HHHHHHHCCCCCCCCC	c1aR-5	ORD	boundary\|Cyclin_N; boundary\|CYCLIN; boundary\|Cyclin_C;	0.0	NA	cosmic_spacer K146R;
6	nes_ord	P30279	143	VLGKLKWNLAAVTP	HHHHCCCCCCCCCH	c3-4	ORD	boundary\|Cyclin_N; boundary\|CYCLIN; boundary\|Cyclin_C;	0.0	NA	cosmic_spacer K146R;
7	nes_ord	P30279	173	KLSLIRKHAQTFIALCA	CHHHHHHHHHHHHHHHH	c1c-AT-5	ORD	boundary\|Cyclin_N; boundary\|CYCLIN; boundary\|Cyclin_C;	0.0	NA	cosmic_spacer R178C;A186T;L187M;C188S;
8	nes_ord	P30279	181	AQTFIALCATDFKFAM	HHHHHHHHHHHHHHHH	c1a-AT-4	ORD	boundary\|Cyclin_N; middle\|Cyclin_C;	0.0	NA	cosmic_spacer A186T;L187M;C188S;T190I;A195G;
9	nes_diso	P30279	276	DQASTPTDVRDIDLXX	CCCCCCCCCEECCC	c1a-AT-4-Ct	DISO	boundary\|Cyclin_C;	0.14	NA	cosmic_spacer T280A;T280I;T280N;P281R;P281T;P281L;P281S; V284E;R285W;L289P;

candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
sequence: Hydrophobic positions are colored in red.
class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
loc_DISO: location of the segment with respect to the ordered/disordered regions
loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
beta: beta-strand content in the middle of the segment
Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.