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P35916_VGFR3 | Vascular endothelial growth factor receptor 3   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P35916 11 LWLCLGLLDGLVSGYS HHHHHHHHHHHHCCCC c1aR-4 boundary 0.0 Bad: -29.547
2 nes_ord P35916 221 LVHITGNELYDIQLLP EEEECCCCCCCCEECC c1a-AT-5 ORD boundary|Ig_2; boundary|Ig_VEGFR; 0.0 NA cosmic_spacer
3 nes_ord P35916 236 PRKSLELLVGEKLVLNC CCCCEEEECCCCEEEEE c1c-4 ORD boundary|Ig_2; boundary|Ig_VEGFR; 0.5 NA cosmic_spacer
4 nes_diso P35916 250 LNCTVWAEFNSGVTFDW EEEEEECCCCCCEEEEE c1c-4 boundary boundary|Ig_2; boundary|Ig_VEGFR; 0.25 NA cosmic_phi_to_LIVMF
5 nes_diso P35916 283 RSQQTHTELSSILTIHN ECCCCCCEEEEEEEECC c1c-AT-4 boundary middle|Ig_VEGFR; 0.62 NA cosmic_spacer_Pro
6 nes_beta_diso P35916 404 SAAGLRRNISLELVVNV CCCCEEEEEEEEEEECC c1c-4 boundary boundary|Ig_VEGFR-3; 1.0 NA cosmic_phi
7 nes_ord P35916 547 IYFYVTTIPDGFTIES EEEEEEECCCCCEEEC c1aR-4 ORD boundary|IG_like; 0.43 Bad: -24.447 cosmic_spacer
8 nes_diso P35916 676 EAPRLTQNLTDLLVNV CCCEEECCCCCEEECC c1a-4 boundary boundary|IG_like; boundary|IGc2; 0.29 Medium: -34.633 cosmic_phi Medium|
9 nes_diso P35916 683 NLTDLLVNVSDSLEMQC CCCCEEECCCCCEEEEE c1c-5 boundary boundary|IG_like; boundary|IGc2; 0.38 NA cosmic_phi_to_LIVMF
10 nes_TM P35916 776 IVILVGTGVIAVFFWV HHHHHHHHHHHHHHHH c1a-5 boundary boundary|IGc2; 0.0 Medium: -35.962 cosmic_phi_to_LIVMF
11 low complexity P35916 783 GVIAVFFWVLLLLIFC HHHHHHHHHHHHHHHH c1a-5 boundary boundary|IGc2; 0.0 Weak: -30.091 cosmic_phi_to_LIVMF
12 low complexity P35916 784 VIAVFFWVLLLLIFCN HHHHHHHHHHHHHHHC c1a-5 boundary boundary|IGc2; 0.0 Weak: -30.351 cosmic_phi_to_LIVMF
13 nes_diso P35916 804 AHADIKTGYLSIIM CCCCCCCCCEEEEE c2-AT-4 boundary boundary|PTKc_VEGFR3; 0.14 NA cosmic_spacer
14 nes_beta_ord P35916 856 FGKVVEASAFGIHK CCEEEEEEEECCCC c2-AT-4 ORD boundary|PTKc_VEGFR3; boundary|Pkinase_Tyr; 1.0 NA cosmic_spacer
15 nes_ord P35916 889 EHRALMSELKILIHIGN HHHHHHHHHHHHHHHHC c1c-4 ORD middle|PTKc_VEGFR3; middle|Pkinase_Tyr; 0.0 Medium: -39.432 cosmic_spacer
16 nes_ord P35916 899 ILIHIGNHLNVVNLLG HHHHHHCCCCCEEEEC c1a-5 ORD middle|PTKc_VEGFR3; middle|Pkinase_Tyr; 0.0 Weak: -30.422 cosmic_phi_to_LIVMF
17 nes_diso P35916 1007 SPLTMEDLVCYSFQVAR CCCCHHHHHHHHHHHHH c1c-4 boundary middle|PTKc_VEGFR3; middle|Pkinase_Tyr; 0.0 Weak: -30.999 cosmic_spacer Weak|
18 nes_ord P35916 1034 IHRDLAARNILLSE CCHHHHHCCEEECC c2-AT-4 ORD middle|PTKc_VEGFR3; middle|Pkinase_Tyr; 0.14 NA cosmic_spacer
19 nes_ord P35916 1047 ESDVVKICDFGLAR CCCEEEECCCCCCC c2-4 ORD middle|PTKc_VEGFR3; middle|Pkinase_Tyr; 0.57 NA cosmic_phi_to_LIVMF
20 low complexity P35916 1099 SFGVLLWEIFSLGA EEEEEEEEEECCCC c3-4 ORD middle|PTKc_VEGFR3; middle|Pkinase_Tyr; 1.0 NA cosmic_spacer
21 nes_ord P35916 1135 RAPELATPAIRRIMLNC CCCCCCCHHHHHHHHHH c1c-AT-4 ORD middle|PTKc_VEGFR3; boundary|Pkinase_Tyr; 0.0 NA cosmic_spacer
22 nes_ord P35916 1136 APELATPAIRRIMLNC CCCCCCHHHHHHHHHH c1a-AT-4 ORD middle|PTKc_VEGFR3; boundary|Pkinase_Tyr; 0.0 NA cosmic_spacer
23 nes_diso P35916 1154 GDPKARPAFSELVEILG CCCHHCCCHHHHHHHHH c1c-AT-4 boundary boundary|PTKc_VEGFR3; boundary|Pkinase_Tyr; 0.0 NA cosmic_spacer
24 nes_diso P35916 1161 AFSELVEILGDLLQ CHHHHHHHHHHHHH c3-4 boundary boundary|PTKc_VEGFR3; boundary|Pkinase_Tyr; 0.0 Medium: -36.285 cosmic_spacer Medium|
25 nes_diso P35916 1195 EEGSFSQVSTMALHI CCCCCCCCCCCCCCC c1b-4 DISO boundary|PTKc_VEGFR3; boundary|Pkinase_Tyr; 0.0 Medium: -33.446 cosmic_phi_to_LIVMF Medium|
26 nes_diso P35916 1265 YKGSVDNQTDSGMVLAS CCCCCCCCCCCCCEECC c1c-AT-4 DISO 0.0 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.