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P35968_VGFR2 | Vascular endothelial growth factor receptor 2   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P35968 2 QSKVLLAVALWLCV HHHHHHHHHHHHHH c2-AT-4 DISO 0.0 NA
2 nes_diso P35968 11 LWLCVETRAASVGLPS HHHHHHHHHHCCCCCC c1a-AT-4 boundary 0.0 NA cosmic_spacer
3 nes_diso P35968 37 QKDILTIKANTTLQITC CCCEEEECCCCCEEEEE c1c-AT-4 boundary 0.38 NA cosmic_spacer
4 nes_beta_ord P35968 106 RETDLASVIYVYVQD CCCCCEEEEEEEECC c1b-4 ORD 0.86 NA cosmic_spacer
5 nes_ord P35968 147 VIPCLGSISNLNVSL EEECCCCCCCCEEEE c1b-5 ORD 0.0 Strong: -42.754 cosmic_phi_to_LIVMF
6 nes_diso P35968 215 IVVVVGYRIYDVVLSP EEEEECCCCCCCEECC c1a-5 boundary boundary|Ig_VEGFR; 0.14 Weak: -30.885 cosmic_phi_to_LIVMF Weak|
7 nes_diso P35968 230 PSHGIELSVGEKLVLNC CCCCEEECCCCCEEEEE c1c-4 boundary boundary|Ig_VEGFR; 0.38 Bad: -23.105 cosmic_phi
8 nes_beta_diso P35968 240 EKLVLNCTARTELNVGI CCEEEEEEEEECCCCCE c1c-AT-4 boundary boundary|Ig_VEGFR; 0.88 NA cosmic_spacer
9 nes_diso P35968 244 LNCTARTELNVGIDFNW EEEEEEECCCCCEEEEE c1c-AT-4 boundary boundary|Ig_VEGFR; 0.38 NA cosmic_spacer
10 nes_beta_diso P35968 281 SGSEMKKFLSTLTIDG CCCEEEEEEEEEEECC c1a-4 boundary middle|Ig_VEGFR; 1.0 NA cosmic_phi
11 nes_ord P35968 328 PFVAFGSGMESLVE CCEECCCCCCCEEE c3-4 ORD boundary|Ig_VEGFR; boundary|Ig_VEGFR-2; 0.14 NA cosmic_spacer
12 nes_diso P35968 336 MESLVEATVGERVRIPA CCCEEEEECCCEEEEEC c1c-4 boundary boundary|Ig_VEGFR; boundary|Ig_VEGFR-2; 0.62 NA cosmic_phi
13 nes_diso P35968 375 HTIKAGHVLTIMEVSE EEEECCCEEEEEECCH c1a-AT-4 boundary middle|Ig_VEGFR-2; 0.57 NA
14 nes_beta_diso P35968 408 KQSHVVSLVVYVPPQIGE EEEEEEEEEEECCCCCCC c4-4 boundary boundary|Ig_VEGFR-2; 0.75 NA cosmic_spacer
15 nes_diso P35968 587 GPQPLPIHVGELPTPVCK CCCCCCCCCCCCCCCCEE c4-4 boundary middle|Ig_3; 0.0 Medium: -33.576 Medium|
16 nes_diso P35968 613 NATMFSNSTNDILIMEL EEEEECCCEEEEEEEEE c1c-AT-4 boundary boundary|Ig_3; 0.62 NA cosmic_spacer
17 nes_diso P35968 613 NATMFSNSTNDILIME EEEEECCCEEEEEEEE c1a-AT-4 boundary boundary|Ig_3; 0.57 NA cosmic_spacer
18 nes_beta_diso P35968 742 VLGCAKVEAFFIIE CCCEEEEEEEEEEE c2-AT-5 boundary boundary|I-set; 1.0 NA cosmic_spacer
19 nes_TM P35968 757 AQEKTNLEIIILVG CCCCCCCCHHHHHH c2-AT-4 boundary boundary|I-set; 0.0 NA cosmic_spacer
20 nes_TM P35968 765 IIILVGTAVIAMFFWL HHHHHHHHHHHHHHHH c1a-5 boundary boundary|I-set; 0.0 Weak: -32.896 cosmic_spacer
21 low complexity P35968 772 AVIAMFFWLLLVIILR HHHHHHHHHHHHHHHH c1a-5 boundary boundary|I-set; 0.0 Weak: -31.855 cosmic_spacer
22 low complexity P35968 773 VIAMFFWLLLVIILRT HHHHHHHHHHHHHHHH c1a-5 boundary boundary|I-set; 0.0 Weak: -30.108 cosmic_spacer
23 nes_diso P35968 793 NGGELKTGYLSIVM CCCCCCCCCEEEEC c2-AT-4 boundary boundary|PTKc_VEGFR2; 0.14 NA cosmic_spacer_Pro
24 nes_beta_ord P35968 845 FGQVIEADAFGIDK CCEEEEEEECCCCC c2-AT-4 ORD boundary|PTKc_VEGFR2; boundary|Pkinase_Tyr; 0.86 NA cosmic_spacer
25 nes_ord P35968 878 EHRALMSELKILIHIGH HHHHHHHHHHHHHHHHC c1c-4 ORD middle|PTKc_VEGFR2; middle|Pkinase_Tyr; 0.0 Medium: -33.06 cosmic_phi_to_LIVMF
26 nes_ord P35968 888 ILIHIGHHLNVVNLLG HHHHHHCCCCHHHHHE c1a-5 ORD middle|PTKc_VEGFR2; middle|Pkinase_Tyr; 0.0 NA cosmic_phi_to_LIVMF
27 nes_diso P35968 998 DFLTLEHLICYSFQVAK CCCCHHHHHHHHHHHHH c1c-5 boundary middle|PTKc_VEGFR2; middle|Pkinase_Tyr; 0.0 Medium: -35.89 cosmic_phi_to_LIVMF Medium|
28 nes_ord P35968 1025 IHRDLAARNILLSE CCHHHHHHHEEEEC c2-AT-4 ORD middle|PTKc_VEGFR2; middle|Pkinase_Tyr; 0.14 NA cosmic_spacer
29 nes_ord P35968 1038 EKNVVKICDFGLAR CCCEEEECCCCCCC c2-4 ORD middle|PTKc_VEGFR2; middle|Pkinase_Tyr; 0.57 NA cosmic_phi
30 low complexity P35968 1090 SFGVLLWEIFSLGA HHHEEEEEEECCCC c3-4 ORD middle|PTKc_VEGFR2; middle|Pkinase_Tyr; 1.0 NA cosmic_spacer
31 nes_diso P35968 1152 TFSELVEHLGNLLQ CHHHHHHHHHHHHH c3-4 boundary boundary|PTKc_VEGFR2; boundary|Pkinase_Tyr; 0.0 Medium: -34.504 cosmic_spacer Medium|
32 nes_diso P35968 1172 GKDYIVLPISETLSMEE CCCCCCCCCCCCCCCCC c1c-4 boundary boundary|PTKc_VEGFR2; boundary|Pkinase_Tyr; 0.0 Bad: -21.985 cosmic_spacer
33 nes_diso P35968 1323 EAELLKLIEIGVQT HHHHHHHHHCCCCC c2-4 DISO 0.0 Bad: -29.155 cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.