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P42226_STAT6 | Signal transducer and activator of transcription 6   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P42226 106 EKKAVMEQFRHLPMPFHW HHHHHHHHHHCCCCCCCC c4-4 boundary boundary|STAT_int; boundary|STAT6_CCD; 0.0 Bad: -19.485 cosmic_spacer
2 nes_diso P42226 133 GLRRLQHRVGEIHLLR HHHHHHHHHHHHHHHH c1a-5 DISO boundary|STAT_int; middle|STAT6_CCD; 0.0 Weak: -31.299 Weak|
3 nes_diso P42226 192 AAKALVLKRIQIWK HHHHHHHHHHHHHH c2-4 boundary middle|STAT6_CCD; 0.0 Medium: -34.06 Medium|
4 nes_diso P42226 261 LDEVLRTLVTSCFLVEK HHHHHHHHHHCHHHHCC c1c-4 boundary boundary|STAT6_CCD; boundary|STAT_bind; 0.0 Strong: -41.44 cosmic_spacer Strong|
5 nes_diso P42226 285 TQTKFQAGVRFLLGLRF CCCCCHHHHHHHHCCHH c1c-4 boundary boundary|STAT6_CCD; boundary|STAT_bind; 0.0 NA cosmic_spacer
6 nes_beta_diso P42226 354 NCCSALFKNLLLKK CEEEEEEEEEEEEE c2-AT-4 __ middle|STAT_bind; 1.0 NA cosmic_spacer
7 nes_beta_diso P42226 395 GPGKLPIQLQALSLPL CCCCCCEEEEECCCCE c1a-4 boundary middle|STAT_bind; 0.71 Weak: -31.689 cosmic_spacer
8 nes_beta_diso P42226 397 GKLPIQLQALSLPL CCCCEEEEECCCCE c2-4 boundary middle|STAT_bind; 0.71 Bad: -23.214 cosmic_phi_to_LIVMF
9 nes_ord P42226 399 LPIQLQALSLPLVVIV CCEEEEECCCCEEEEE c1aR-5 ORD middle|STAT_bind; 0.43 Medium: -35.007 cosmic_phi_to_LIVMF
10 low complexity P42226 402 QLQALSLPLVVIVH EEEECCCCEEEEEC c3-4 ORD middle|STAT_bind; 0.43 Medium: -33.849 cosmic_spacer
11 nes_diso P42226 510 RGFTFWQWFDGVLDLTK CCCCHHHHHHHHHHHHH c1c-4 boundary boundary|STAT_bind; boundary|SH2_STAT6; 0.0 Bad: -28.213 cosmic_spacer
12 nes_ord P42226 588 NIQPFSAKDLSIRS EECCCCHHHHCCCC c2-AT-5 ORD middle|SH2_STAT6; 0.0 NA cosmic_spacer
13 nes_diso P42226 595 KDLSIRSLGDRIRDLA HHHCCCCHHHHHHHCH c1aR-5 boundary middle|SH2_STAT6; 0.0 Bad: -23.301 cosmic_spacer
14 nes_diso P42226 598 SIRSLGDRIRDLAQ CCCCHHHHHHHCHH c3-4 boundary middle|SH2_STAT6; 0.0 Weak: -31.777 cosmic_spacer Weak|
15 nes_diso P42226 721 PHLQMPPSLGQMSLPF CCCCCCCCCCCCCCCC c1a-4 DISO middle|STAT6_C; 0.0 Bad: -14.34 cosmic_spacer
16 nes_diso P42226 794 LLPPTEQDLTKLLLEG CCCCCHHHHHHHHHCC c1a-AT-5 DISO middle|STAT6_C; 0.0 NA cosmic_spacer
17 nes_diso P42226 830 GQSGISMSHMDLRA CCCCCCCCCCCCCC c2-4 DISO boundary|STAT6_C; 0.0 Weak: -30.381 Weak|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.