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P46531_NOTC1 | Neurogenic locus notch homolog protein 1   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 low complexity P46531 1 XMPPLLAPLLCLALLP CCCCCCCCCCCCCCCC c1a-5-Nt boundary 0.0 Bad: -28.671
2 nes_diso P46531 467 CLDQIGEFQCICMPG EECCCCCEEEECCCC c1b-5 boundary small|EGF_CA; 0.57 NA cosmic_phi
3 nes_diso P46531 1565 VPERLAAGTLVVVVLMP CCCCCCCCEEEEEEECC c1c-AT-4 boundary boundary|NOD; 0.5 NA cosmic_spacer_Pro
4 nes_diso P46531 1565 VPERLAAGTLVVVVLM CCCCCCCCEEEEEEEC c1a-AT-4 boundary boundary|NOD; 0.43 NA cosmic_spacer_Pro
5 nes_diso P46531 1566 PERLAAGTLVVVVLMPP CCCCCCCEEEEEEECCH c1c-AT-4 boundary boundary|NOD; 0.62 NA cosmic_spacer
6 nes_diso P46531 1566 PERLAAGTLVVVVLMP CCCCCCCEEEEEEECC c1a-AT-4 boundary boundary|NOD; 0.57 NA cosmic_spacer
7 nes_beta_diso P46531 1567 ERLAAGTLVVVVLMPP CCCCCCEEEEEEECCH c1a-AT-4 boundary boundary|NOD; 0.71 NA cosmic_spacer
8 nes_diso P46531 1592 FLRELSRVLHTNVVFKR HHHHHHHHCCCEEEECC c1c-5 boundary boundary|NOD; 0.12 Bad: -19.794 cosmic_phi
9 nes_beta_diso P46531 1667 DPMDVRGSIVYLEIDN CCCCCCEEEEEEEECC c1a-4 boundary boundary|NODP; 0.71 NA cosmic_phi
10 nes_diso P46531 1698 DVAAFLGALASLGS HHHHHHHHHHHHCC c3-4 boundary boundary|NODP; 0.0 Weak: -32.959 cosmic_phi Weak|
11 nes_TM P46531 1732 AQLHFMYVAAAAFVLLF CCCCCCCCCCCCCCCCC c1c-AT-4 boundary boundary|NODP; 0.0 NA cosmic_spacer
12 nes_TM P46531 1733 QLHFMYVAAAAFVLLFF CCCCCCCCCCCCCCCCC c1c-AT-5 boundary boundary|NODP; 0.0 NA cosmic_spacer
13 nes_TM P46531 1733 QLHFMYVAAAAFVLLF CCCCCCCCCCCCCCCC c1a-AT-5 boundary boundary|NODP; 0.0 NA cosmic_spacer
14 nes_TM P46531 1735 HFMYVAAAAFVLLFFVG CCCCCCCCCCCCCCCCC c1c-AT-5 __ boundary|NODP; 0.0 NA cosmic_spacer
15 nes_TM P46531 1735 HFMYVAAAAFVLLFFV CCCCCCCCCCCCCCCC c1a-AT-5 __ boundary|NODP; 0.0 NA cosmic_spacer
16 nes_TM P46531 1736 FMYVAAAAFVLLFFVGC CCCCCCCCCCCCCCCCC c1c-AT-5 __ boundary|NODP; 0.0 NA cosmic_spacer
17 nes_TM P46531 1736 FMYVAAAAFVLLFFVG CCCCCCCCCCCCCCCC c1a-AT-5 __ boundary|NODP; 0.0 NA cosmic_spacer
18 nes_TM P46531 1737 MYVAAAAFVLLFFVGC CCCCCCCCCCCCCCCC c1a-AT-4 __ boundary|NODP; 0.0 NA cosmic_spacer
19 low complexity P46531 1742 AAFVLLFFVGCGVLLSR CCCCCCCCCCCCCCCCC c1c-4 boundary boundary|NODP; 0.0 Medium: -35.827 cosmic_spacer_Pro
20 low complexity P46531 1743 AFVLLFFVGCGVLLSR CCCCCCCCCCCCCCCC c1aR-4 boundary boundary|NODP; 0.0 Weak: -30.419 cosmic_spacer
21 nes_diso P46531 1814 GDEDLETKKFRFEE CCCCHHHCCCCCCC c2-AT-4 DISO 0.0 NA cosmic_spacer
22 nes_diso P46531 1844 TQQHLDAADLRMSA CHHCCCCCCCCCCC c2-AT-4 DISO boundary|Ank_2; 0.0 NA cosmic_spacer
23 nes_diso P46531 1863 PQGEVDADCMDVNV CCCCCCCCCCCCCC c2-AT-4 boundary boundary|Ank_2; 0.0 NA cosmic_spacer
24 nes_diso P46531 1965 LHAAVSADAQGVFQILI CCHHHHCCCHHHEEEEE c1c-AT-4 boundary boundary|Ank_2; middle|Ank_2; boundary|Ank_2; 0.0 NA cosmic_spacer
25 nes_diso P46531 1993 HDGTTPLILAARLAVEG CCCCHHHHHHHHHHHHH c1c-AT-4 boundary boundary|Ank_2; boundary|Ank_2; boundary|Ank_2; 0.0 NA cosmic_spacer
26 nes_diso P46531 2003 ARLAVEGMLEDLINSH HHHHHHHHHHHHHHCC c1aR-4 boundary boundary|Ank_2; boundary|Ank_2; 0.0 Medium: -33.89 cosmic_phi Medium|
27 nes_diso P46531 2037 AVNNVDAAVVLLKN HHCCHHHHHHHHHC c3-4 DISO boundary|Ank_2; middle|Ank_2; boundary|Ank_2; 0.0 Weak: -31.077 cosmic_phi Weak|
28 nes_diso P46531 2085 ANRDITDHMDRLPRDIAQ CCCCCCCCCCCCHHHHHH c4-4 DISO boundary|Ank_2; boundary|Ank_2; 0.0 Bad: -21.254 cosmic_phi
29 nes_diso P46531 2238 PDTHLGIGHLNVAA CCCCCCCCCCCCCC c2-4 DISO 0.0 Medium: -37.197 cosmic_phi Medium|
30 nes_diso P46531 2539 PPTSMQSQIARIPEAFKX CCCCCCCCCCCCCHHHC c4-4 DISO boundary|DUF3454; 0.0 Bad: -21.729 cosmic_phi
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.