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P49815_TSC2 | Tuberin   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P49815 7 KDSGLKEKFKILLGLGT CCCCHHHHHHHHHCCCC c1c-4 DISO 0.0 Weak: -31.873 cosmic_spacer Weak|
2 nes_diso P49815 36 TEFIITAEILRELSMEC CCCCCCHHHHHHHCCCC c1c-4 boundary boundary|DUF3384; 0.0 Bad: -21.531 cosmic_spacer
3 nes_diso P49815 46 RELSMECGLNNRIRMIG HHHCCCCCHHHHHHHHH c1c-4 boundary boundary|DUF3384; 0.0 Bad: -23.609 cosmic_spacer
4 nes_ord P49815 77 AVEALWKAVADLLQ HHHHHHHHHHHHHC c3-4 ORD middle|DUF3384; 0.0 NA cosmic_spacer_Pro
5 nes_ord P49815 115 RLGVLRALFFKVIK CCHHHHHHHHHHHH c3-4 ORD middle|DUF3384; 0.0 NA cosmic_spacer
6 nes_ord P49815 152 HITYLEEELADFVLQW CCHHHHHHHHHHHHHH c1a-5 ORD middle|DUF3384; 0.0 NA cosmic_spacer
7 nes_ord P49815 164 VLQWMDVGLSSEFLLVL HHHHHHHHHHHHHHHHH c1c-5 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
8 nes_ord P49815 168 MDVGLSSEFLLVLVNL HHHHHHHHHHHHHHHH c1a-4 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
9 nes_ord P49815 172 LSSEFLLVLVNLVKFNS HHHHHHHHHHHHHHCCC c1c-4 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
10 nes_ord P49815 172 LSSEFLLVLVNLVK HHHHHHHHHHHHHH c2-4 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
11 nes_ord P49815 173 SSEFLLVLVNLVKFNS HHHHHHHHHHHHHCCC c1a-4 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
12 low complexity P49815 175 EFLLVLVNLVKFNS HHHHHHHHHHHCCC c2-5 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
13 low complexity P49815 175 EFLLVLVNLVKFNS HHHHHHHHHHHCCC c3-4 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
14 nes_ord P49815 187 NSCYLDEYIARMVQMIC CCCCCHHHHHHHHHHHH c1c-4 ORD middle|DUF3384; 0.0 NA cosmic_phi_to_LIVMF
15 nes_ord P49815 194 YIARMVQMICLLCVRT HHHHHHHHHHHHHCCC c1a-5 ORD middle|DUF3384; 0.0 NA cosmic_spacer
16 nes_ord P49815 201 MICLLCVRTASSVDIEV HHHHHHCCCCCHHHHHH c1c-AT-5 ORD middle|DUF3384; 0.0 NA cosmic_spacer
17 nes_ord P49815 205 LCVRTASSVDIEVSLQV HHCCCCCHHHHHHHHHH c1c-AT-4 ORD middle|DUF3384; 0.0 NA cosmic_spacer
18 nes_ord P49815 215 IEVSLQVLDAVVCYNC HHHHHHHHHHHHHCCC c1aR-4 ORD middle|DUF3384; 0.0 Weak: -30.137 cosmic_spacer
19 nes_ord P49815 232 PAESLPLFIVTLCR CHHHHHHHHHHHHH c2-4 ORD middle|DUF3384; 0.0 Medium: -35.987 cosmic_spacer
20 nes_ord P49815 235 SLPLFIVTLCRTINVKE HHHHHHHHHHHHCCCHH c1c-5 ORD middle|DUF3384; 0.0 Medium: -35.757 cosmic_phi_to_LIVMF
21 nes_ord P49815 236 LPLFIVTLCRTINVKE HHHHHHHHHHHCCCHH c1aR-4 ORD middle|DUF3384; 0.0 Weak: -32.416 cosmic_spacer
22 nes_ord P49815 288 DAPLLRGAVFFVGMAL CHHHHHHHHHHHHHHH c1a-4 ORD middle|DUF3384; 0.0 Bad: -27.026 cosmic_spacer
23 nes_ord P49815 292 LRGAVFFVGMALWG HHHHHHHHHHHHHC c2-4 ORD middle|DUF3384; 0.0 Weak: -30.792 cosmic_spacer
24 nes_diso P49815 358 WDILLNIIERLLQQLQ HHHHHHHHHHHHHHHH c1aR-5 boundary middle|DUF3384; 0.0 Medium: -36.633 cosmic_phi Medium|
25 nes_diso P49815 361 LLNIIERLLQQLQT HHHHHHHHHHHHHC c3-4 boundary middle|DUF3384; 0.0 Medium: -34.194 cosmic_phi Medium|
26 nes_diso P49815 364 IIERLLQQLQTLDS HHHHHHHHHHCCCC c3-4 boundary middle|DUF3384; 0.0 Medium: -33.022 cosmic_spacer Medium|
27 nes_diso P49815 383 IVHDLLTTVEELCD HHHHHHHHHHHHHH c3-4 boundary middle|DUF3384; 0.0 Bad: -29.437 cosmic_phi_to_LIVMF
28 nes_ord P49815 441 WIQNLQALMERFFR HHHHHHHHHHHHHC c3-4 ORD boundary|DUF3384; 0.0 Medium: -37.784 cosmic_phi_to_LIVMF
29 nes_ord P49815 457 SRGAVRIKVLDVLSFVL CCCHHHHHHHHHHHHHH c1c-4 ORD boundary|DUF3384; 0.0 Bad: -26.101 cosmic_phi_to_LIVMF
30 nes_ord P49815 457 SRGAVRIKVLDVLS CCCHHHHHHHHHHH c2-4 ORD boundary|DUF3384; 0.0 Bad: -27.649 cosmic_phi_to_LIVMF
31 low complexity P49815 461 VRIKVLDVLSFVLLINR HHHHHHHHHHHHHHHHH c1c-4 ORD boundary|DUF3384; 0.0 Bad: -28.834 cosmic_spacer
32 nes_ord P49815 461 VRIKVLDVLSFVLLIN HHHHHHHHHHHHHHHH c1a-4 ORD boundary|DUF3384; 0.0 Weak: -30.021 cosmic_phi_to_LIVMF
33 low complexity P49815 462 RIKVLDVLSFVLLI HHHHHHHHHHHHHH c2-5 ORD boundary|DUF3384; 0.0 Medium: -34.321 cosmic_spacer
34 nes_ord P49815 464 KVLDVLSFVLLINRQF HHHHHHHHHHHHHHHH c1aR-4 ORD boundary|DUF3384; 0.0 Bad: -26.701 cosmic_spacer
35 low complexity P49815 464 KVLDVLSFVLLINR HHHHHHHHHHHHHH c3-4 ORD boundary|DUF3384; 0.0 Bad: -28.807 cosmic_phi_to_LIVMF
36 nes_ord P49815 500 KDHQVRKLATQLLVDL CCHHHHHHHHHHHHHH c1a-AT-4 ORD boundary|DUF3384; 0.0 NA cosmic_spacer
37 nes_ord P49815 500 KDHQVRKLATQLLVDL CCHHHHHHHHHHHHHH c1d-4 ORD boundary|DUF3384; 0.0 NA cosmic_spacer
38 nes_diso P49815 523 HFNSLLDIIEKVMA HHHHHHHHHHHHHH c3-4 boundary boundary|Tuberin; 0.0 Medium: -36.153 cosmic_phi Medium|
39 nes_diso P49815 556 SLEDVKTAVLGLLVIL CHHHHHHHHHHHHHHH c1a-5 boundary boundary|Tuberin; 0.0 Medium: -34.837 cosmic_phi Medium|
40 nes_diso P49815 567 LLVILQTKLYTLPA HHHHHHHHHHCCCH c3-4 boundary boundary|Tuberin; 0.0 Weak: -31.48 cosmic_phi Weak|
41 nes_diso P49815 582 HATRVYEMLVSHIQLHY HHHHHHHHHHHHHHHHH c1c-4 boundary middle|Tuberin; 0.0 Bad: -26.355 cosmic_spacer
42 nes_ord P49815 585 RVYEMLVSHIQLHY HHHHHHHHHHHHHH c2-5 ORD middle|Tuberin; 0.0 Weak: -30.682 cosmic_spacer
43 nes_diso P49815 606 IASSIRLQAFDFLL CHHHHHHHHHHHHH c2-4 boundary middle|Tuberin; 0.0 Medium: -33.258 cosmic_spacer Medium|
44 nes_diso P49815 608 SSIRLQAFDFLLLLRA HHHHHHHHHHHHHHCC c1aR-4 boundary middle|Tuberin; 0.0 Weak: -30.421 cosmic_spacer Weak|
45 nes_diso P49815 677 PAVRLGSVPYSLLFRV CCCEEEECCHHHHHHH c1aR-4 boundary middle|Tuberin; 0.43 Bad: -28.613 cosmic_spacer
46 nes_diso P49815 680 RLGSVPYSLLFRVLLQC EEEECCHHHHHHHHHHH c1c-5 boundary middle|Tuberin; 0.0 Bad: -26.833 cosmic_spacer
47 nes_diso P49815 686 YSLLFRVLLQCLKQES HHHHHHHHHHHHHCCC c1aR-4 boundary middle|Tuberin; 0.0 Weak: -31.836 cosmic_spacer Weak|
48 nes_ord P49815 706 LKLVLGRLPESLRYKV HHHHHHCHHHHHCCHH c1aR-4 ORD middle|Tuberin; 0.0 NA cosmic_spacer
49 nes_ord P49815 709 VLGRLPESLRYKVLIFT HHHCHHHHHCCHHHHHC c1c-5 ORD middle|Tuberin; 0.0 Bad: -26.04 cosmic_phi_to_LIVMF
50 nes_diso P49815 729 SVDQLCSALCSMLS HHHHHHHHHHHHHC c3-4 boundary middle|Tuberin; 0.0 Medium: -38.688 cosmic_phi_to_LIVMF Medium|
51 nes_ord P49815 802 SQCVVALSICSVEMPD HHHHHHHHHHHHHCHH c1a-4 ORD middle|Tuberin; 0.0 NA cosmic_phi_to_LIVMF
52 nes_ord P49815 804 CVVALSICSVEMPD HHHHHHHHHHHCHH c2-5 ORD middle|Tuberin; 0.0 NA cosmic_phi_to_LIVMF
53 low complexity P49815 819 IIKALPVLVVKLTH HHHHHHHHHHHHHH c2-5 ORD middle|Tuberin; 0.0 NA cosmic_phi
54 low complexity P49815 819 IIKALPVLVVKLTH HHHHHHHHHHHHHH c3-4 ORD middle|Tuberin; 0.0 NA cosmic_phi
55 low complexity P49815 822 ALPVLVVKLTHISA HHHHHHHHHHHHHC c3-4 ORD middle|Tuberin; 0.0 NA cosmic_phi
56 nes_ord P49815 842 PLLEFLSTLARLPH HHHHHHHHHHCCHH c3-4 ORD middle|Tuberin; 0.0 NA
57 nes_ord P49815 862 AEQYASVFAISLPY HHHHHHHHHHHHHC c2-AT-4 ORD middle|Tuberin; 0.0 NA cosmic_spacer
58 nes_ord P49815 881 FNQYIVCLAHHVIAMWF HHHHHHHHHHHHHHHHH c1c-AT-4 ORD boundary|Tuberin; 0.0 NA cosmic_spacer_Pro
59 nes_diso P49815 908 FVPFITKGLRSNVLLSF HHHHHHHHHHHCCCCCC c1c-5 boundary boundary|Tuberin; 0.0 Bad: -25.985 cosmic_phi
60 nes_diso P49815 1007 SVAQADDSLKNLHLEL CCCCCCCCHHHHHHHH c1a-AT-5 DISO 0.0 NA cosmic_spacer
61 nes_diso P49815 1069 VTTSVGTGTRSLLGLDS EEECCCCCCHHHCCCCC c1c-AT-4 boundary 0.0 NA cosmic_spacer_Pro
62 nes_diso P49815 1133 GGHGLRVGALDVPA CCCCEECCCCCCCH c2-4 DISO 0.29 Weak: -32.494 cosmic_phi_to_LIVMF Weak|
63 nes_diso P49815 1313 EPPGLEDVEAALGMDR CCCCHHHHHHHHCCCC c1d-4 DISO 0.0 Bad: -24.653
64 nes_diso P49815 1491 KVPGINPSFVFLQLYH CCCCCCHHHHHHHHHC c1a-5 boundary 0.0 Bad: -25.558 cosmic_spacer
65 nes_diso P49815 1570 RYTEFLTGLGRLIELKD HHHHHHHHCCCEEECCC c1c-4 boundary boundary|Rap_GAP; 0.12 Bad: -22.99 cosmic_phi_to_LIVMF
66 nes_ord P49815 1588 QPDKVYLGGLDVCG CCCCCEECCCCCCC c2-4 ORD middle|Rap_GAP; 0.29 NA cosmic_spacer
67 nes_ord P49815 1658 KLGTIKGQFNFVHVIV CCCCCCCCCCEEEEEE c1a-5 ORD middle|Rap_GAP; 0.14 NA cosmic_phi_to_LIVMF
68 nes_diso P49815 1704 SDRNLPFVARQMALHA CHHHHHHHHHHHHHHH c1a-AT-4 boundary middle|Rap_GAP; 0.0 NA cosmic_spacer
69 nes_diso P49815 1704 SDRNLPFVARQMALHA CHHHHHHHHHHHHHHH c1d-4 boundary middle|Rap_GAP; 0.0 NA cosmic_phi_to_LIVMF
70 nes_diso P49815 1713 RQMALHANMASQVHHSR HHHHHHHHHHHHHHHCC c1cR-4 boundary boundary|Rap_GAP; 0.0 Bad: -29.575 cosmic_phi_to_LIVMF
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.