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P49915_GUAA | GMP synthase [glutamine-hydrolyzing]   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso P49915 37 YGKVIDRRVRELFVQS HHHHHHHHHHHCCCEE c1a-4 boundary boundary|GATase1_GMP_Synthase; 0.0 Bad: -29.86 cosmic_spacer
2 nes_ord P49915 85 DAPWFDPAIFTIGKPVLG CCCCCCHHHHHCCCCEEE c4-4 ORD middle|GATase1_GMP_Synthase; 0.0 Bad: -29.195 cosmic_phi
3 nes_ord P49915 92 AIFTIGKPVLGICY HHHHCCCCEEEECH c3-4 ORD middle|GATase1_GMP_Synthase; 0.29 Weak: -31.541 cosmic_phi
4 nes_ord P49915 99 PVLGICYGMQMMNK CEEEECHHHHHHHH c3-4 ORD middle|GATase1_GMP_Synthase; 0.29 Medium: -37.597 cosmic_phi
5 nes_ord P49915 156 SVDKVADGFKVVAR CCCCCCCCEEEEEE c3-4 ORD middle|GATase1_GMP_Synthase; 0.29 NA cosmic_spacer
6 nes_ord P49915 199 GKVILKNFLYDIAGCS HHHHHHHHHHHHHCCC c1aR-4 ORD boundary|GATase1_GMP_Synthase; 0.0 NA cosmic_spacer
7 nes_ord P49915 230 IKERVGTSKVLVLL HHHHHCCCCEEEEE c2-AT-4 ORD boundary|GATase1_GMP_Synthase; boundary|GMP_synthase_C; 0.14 NA cosmic_spacer_Pro
8 nes_diso P49915 279 ESQSVEEALKKLGIQV CHHHHHHHHHHCCCCE c1a-4 boundary middle|GMP_synthase_C; 0.0 Medium: -38.853 cosmic_spacer Medium|
9 nes_diso P49915 286 ALKKLGIQVKVINA HHHHCCCCEEEECC c3-4 boundary middle|GMP_synthase_C; 0.29 Bad: -26.367
10 nes_diso P49915 343 TFVKIANEVIGEMNLKP HHHHHHHHHHHHCCCCC c1c-5 boundary middle|GMP_synthase_C; 0.0 Bad: -25.57 cosmic_phi_to_LIVMF
11 nes_ord P49915 415 HKDEVRILGRELGLPE CHHHHHHHHHHHCCCH c1d-4 ORD middle|GMP_synthase_C; 0.0 NA cosmic_spacer
12 nes_ord P49915 500 QITSLHSLNAFLLPI CCCCHHHCHHHCCCC c1b-5 ORD middle|GMP_synthase_C; 0.0 NA cosmic_spacer
13 nes_ord P49915 506 SLNAFLLPIKTVGVQG HCHHHCCCCCCCEECC c1a-5 ORD middle|GMP_synthase_C; 0.0 Bad: -27.514 cosmic_spacer
14 nes_ord P49915 542 SLIFLARLIPRMCHNV HHHHHHHHHHHHCCCC c1aR-4 ORD middle|GMP_synthase_C; 0.0 NA cosmic_spacer
15 nes_ord P49915 549 LIPRMCHNVNRVVYIFG HHHHHCCCCCCEEEECC c1c-5 ORD middle|GMP_synthase_C; 0.12 NA cosmic_spacer
16 nes_ord P49915 549 LIPRMCHNVNRVVY HHHHHCCCCCCEEE c3-4 ORD middle|GMP_synthase_C; 0.0 NA cosmic_spacer
17 nes_diso P49915 658 PVEVVLKMVTEIKK HHHHHHHHHHHHHC c3-4 boundary boundary|GMP_synthase_C; 0.0 Medium: -34.293 cosmic_spacer Medium|
18 nes_diso P49915 661 VVLKMVTEIKKIPG HHHHHHHHHHCCCC c3-4 boundary boundary|GMP_synthase_C; 0.0 Bad: -27.768 cosmic_phi_to_LIVMF
19 nes_diso P49915 671 KIPGISRIMYDLTS CCCCCCEEEEECCC c3-4 boundary boundary|GMP_synthase_C; 0.57 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.