P50570 | Dynamin-2

P50570_DYN2 | Dynamin-2 ProteinAtlas Cosmic Proviz Swissmodel

Cosmic Cancer Gene Census (CGC)

#	candidates	uniprotID	start#	sequence	secondary	class	loc_DISO	loc_CDD	beta	Ebind	Cosmic	TOTALscore(Ebind\|Stars)
1	nes_diso	P50570	5	GMEELIPLVNKLQD	HHHHHHHHHHHHHH	c3-4	boundary	boundary\|DYNc;	0.0	Medium: -36.68		Medium\|
2	nes_diso	P50570	12	LVNKLQDAFSSIGQ	HHHHHHHHHHHHCC	c3-4	boundary	boundary\|DYNc;	0.0	Weak: -32.703		Weak\|
3	nes_diso	P50570	61	SGIVTRRPLILQLIFSK	CCCCCCCCCEEEECCCC	c1c-AT-4	__	middle\|DYNc; boundary\|CrfC;	0.38	NA	cosmic_spacer I70N;Q72L;
4	nes_diso	P50570	126	SPHVLNLTLIDLPG	CCCCCCEEEEECCC	c2-4	boundary	middle\|DYNc; middle\|CrfC;	0.57	NA	cosmic_spacer V129M;
5	nes_ord	P50570	148	QPPDIEYQIKDMILQF	CCCCHHHHHHHHHHHH	c1a-4	ORD	middle\|DYNc; middle\|CrfC;	0.0	NA	cosmic_phi I152T;E153K;L161P;
6	nes_beta_ord	P50570	196	QGLRTIGVITKLDLMD	CCCCEEEEEECHHHCC	c1a-AT-4	ORD	middle\|DYNc; middle\|CrfC; boundary\|Dynamin_M;	0.86	NA	cosmic_spacer G202S;L209P;
7	nes_beta_ord	P50570	197	GLRTIGVITKLDLMD	CCCEEEEEECHHHCC	c1b-5	ORD	middle\|DYNc; middle\|CrfC; boundary\|Dynamin_M;	0.71	NA	cosmic_phi G202S;L209P;
8	nes_diso	P50570	325	KTKALLQMVQQFGVDF	HHHHHHHHHHHHHHHH	c1a-4	boundary	middle\|CrfC; middle\|Dynamin_M;	0.0	Weak: -32.456		Weak\|
9	nes_diso	P50570	366	FHERFPFELVKMEFDE	HHHCCCHHHHCCCCCC	c1a-4	boundary	middle\|CrfC; middle\|Dynamin_M;	0.0	Weak: -31.101	cosmic_phi_to_LIVMF F370L;F372L;E373V;E378D;	Weak\|
10	nes_diso	P50570	366	FHERFPFELVKMEF	HHHCCCHHHHCCCC	c2-4	boundary	middle\|CrfC; middle\|Dynamin_M;	0.0	Bad: -29.656	cosmic_phi_to_LIVMF F370L;F372L;E373V;E378D;
11	nes_diso	P50570	368	ERFPFELVKMEFDE	HCCCHHHHCCCCCC	c2-4	__	middle\|CrfC; middle\|Dynamin_M;	0.0	Bad: -21.239	cosmic_phi_to_LIVMF F370L;F372L;E373V;E378D;
12	nes_ord	P50570	405	PDLAFEAIVKKQVVKLK	CHHHHHHHHHHHHHHHH	c1cR-5	ORD	middle\|CrfC; middle\|Dynamin_M;	0.0	NA	cosmic_spacer E410K;
13	nes_ord	P50570	424	CLKCVDLVIQELIN	HHHHHHHHHHHHHH	c3-4	ORD	middle\|CrfC; middle\|Dynamin_M;	0.0	Weak: -30.207
14	nes_ord	P50570	428	VDLVIQELINTVRQCT	HHHHHHHHHHHHHHHH	c1aR-4	ORD	middle\|CrfC; middle\|Dynamin_M;	0.0	Weak: -32.712
15	nes_diso	P50570	467	REGRTKDQILLLIDIEQ	CHHHHHHHHHHHHHHHH	c1c-AT-4	boundary	boundary\|CrfC; boundary\|Dynamin_M;	0.0	NA	cosmic_spacer K472N;L476I;
16	nes_diso	P50570	522	RRGWLTINNISLMK	CCCCCCCCCCCCCC	c2-4	DISO	boundary\|CrfC; boundary\|Dynamin_M; boundary\|PH_dynamin;	0.0	Bad: -25.611	cosmic_phi W525L;T527I;I528M;I531T;S532I;
17	nes_diso	P50570	561	KKYMLPLDNLKIRD	HCCCCCCCCCCCCC	c2-4	DISO	middle\|PH_dynamin;	0.0	Weak: -31.081	cosmic_spacer P566S;	Weak\|
18	nes_diso	P50570	568	DNLKIRDVEKGFMSNK	CCCCCCCCCCCCCCCC	c1aR-4	DISO	middle\|PH_dynamin;	0.0	Bad: -18.958	cosmic_spacer S581F;
19	nes_diso	P50570	592	EQRNVYKDLRQIELAC	CCCCHHCCHHHHHCCC	c1a-4	DISO	middle\|PH_dynamin;	0.0	Bad: -22.686	cosmic_phi_to_LIVMF Q593K;V596F;R601L;E604K;
20	nes_diso	P50570	652	QVETIRNLVDSYVAIIN	HHHHHHHHHHHHHHHHH	c1c-5	boundary	boundary\|PH_dynamin; boundary\|GED;	0.0	Weak: -30.852	cosmic_spacer L659Q;A665S;	Weak\|
21	nes_diso	P50570	663	YVAIINKSIRDLMP	HHHHHHHHHHHHHH	c3-4	__	boundary\|PH_dynamin; boundary\|GED;	0.0	Bad: -29.552	cosmic_spacer A665S;R672H;R672C;D673G;
22	nes_ord	P50570	671	IRDLMPKTIMHLMINN	HHHHHHHHHHHHHHHH	c1a-4	ORD	middle\|GED;	0.0	Bad: -24.65	cosmic_phi_to_LIVMF R672H;R672C;D673G;T678I;I679V;I679M;M680L;
23	nes_diso	P50570	721	DMLRMYHALKEALNIIG	HHHHHHHHHHHHHHHHH	c1c-5	boundary	boundary\|GED; boundary\|FAP superfamily;	0.0	Weak: -30.983		Weak\|

candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
sequence: Hydrophobic positions are colored in red.
class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
loc_DISO: location of the segment with respect to the ordered/disordered regions
loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
beta: beta-strand content in the middle of the segment
Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.