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Q04771_ACVR1 | Activin receptor type-1   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 low complexity Q04771 2 VDGVMILPVLIMIALPS CCHHHHHHHHHHHHCCC c1c-4 boundary boundary|Activin_recp; 0.0 Weak: -30.384 cosmic_spacer
2 low complexity Q04771 3 DGVMILPVLIMIALPS CHHHHHHHHHHHHCCC c1a-4 boundary boundary|Activin_recp; 0.0 Bad: -25.493 cosmic_spacer
3 low complexity Q04771 7 ILPVLIMIALPS HHHHHHHHHCCC c2-rev boundary boundary|Activin_recp; 0.0 Bad: -26.173 cosmic_spacer
4 nes_TM Q04771 116 GTQNFHLEVGLIILSV CCCCCCHHHHHHHHHH c1a-4 __ boundary|Activin_recp; 0.0 Weak: -31.082
5 nes_TM Q04771 118 QNFHLEVGLIILSVVF CCCCHHHHHHHHHHHH c1a-4 __ boundary|Activin_recp; 0.0 Medium: -34.865
6 nes_TM Q04771 118 QNFHLEVGLIILSV CCCCHHHHHHHHHH c2-4 boundary boundary|Activin_recp; 0.0 Medium: -38.901
7 nes_TM Q04771 120 FHLEVGLIILSVVFAV CCHHHHHHHHHHHHHH c1a-4 __ boundary|Activin_recp; 0.0 Bad: -27.78
8 nes_TM Q04771 120 FHLEVGLIILSVVFAV CCHHHHHHHHHHHHHH c1aR-4 __ boundary|Activin_recp; 0.0 Weak: -31.389
9 nes_TM Q04771 120 FHLEVGLIILSVVF CCHHHHHHHHHHHH c2-4 boundary boundary|Activin_recp; 0.0 Bad: -25.532
10 nes_TM Q04771 122 LEVGLIILSVVFAVCL HHHHHHHHHHHHHHHH c1aR-4 __ boundary|Activin_recp; 0.0 Bad: -29.651
11 low complexity Q04771 122 LEVGLIILSVVFAV HHHHHHHHHHHHHH c2-4 boundary boundary|Activin_recp; 0.0 Bad: -27.973
12 low complexity Q04771 123 EVGLIILSVVFAVCLLA HHHHHHHHHHHHHHHHH c1c-5 boundary boundary|Activin_recp; 0.0 Bad: -22.378
13 nes_TM Q04771 124 VGLIILSVVFAVCLLA HHHHHHHHHHHHHHHH c1a-4 boundary boundary|Activin_recp; 0.0 Medium: -37.051
14 nes_TM Q04771 124 VGLIILSVVFAVCLLA HHHHHHHHHHHHHHHH c1aR-5 boundary boundary|Activin_recp; 0.0 Medium: -34.927 cosmic_spacer
15 low complexity Q04771 127 IILSVVFAVCLLAC HHHHHHHHHHHHHH c3-4 boundary boundary|Activin_recp; 0.0 Medium: -39.811 cosmic_spacer
16 nes_TM Q04771 131 VVFAVCLLACLLGVAL HHHHHHHHHHHHHHHH c1aR-4 boundary boundary|Activin_recp; 0.0 Medium: -36.418 cosmic_spacer
17 nes_TM Q04771 133 FAVCLLACLLGVALRK HHHHHHHHHHHHHHHH c1a-4 boundary boundary|Activin_recp; 0.0 Weak: -32.537 cosmic_phi
18 nes_diso Q04771 196 LPFLVQRTVARQITLLE CCCCCCCCCCCCEEEEE c1c-4 boundary boundary|STKc_ACVR1_ALK1; boundary|S_TKc; 0.0 Weak: -30.627 cosmic_spacer Weak|
19 nes_ord Q04771 284 HYHEMGSLYDYLQLTT HHCCCCCHHHHHCCCC c1d-4 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA cosmic_phi_to_LIVMF
20 nes_ord Q04771 295 LQLTTLDTVSCLRIVL HCCCCCCHHHHHHHHH c1a-AT-4 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA cosmic_spacer
21 nes_ord Q04771 296 QLTTLDTVSCLRIVL CCCCCCHHHHHHHHH c1b-5 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA cosmic_spacer
22 nes_ord Q04771 298 TTLDTVSCLRIVLSIAS CCCCHHHHHHHHHHHHH c1c-AT-4 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA cosmic_spacer
23 nes_ord Q04771 299 TLDTVSCLRIVLSIAS CCCHHHHHHHHHHHHH c1d-5 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA cosmic_spacer
24 nes_ord Q04771 308 IVLSIASGLAHLHIEI HHHHHHHHHHHHHHHH c1a-5 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA
25 nes_diso Q04771 379 KRYMAPEVLDETIQVDC CEECCCHHHCCCCCCCC c1c-AT-4 boundary middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA cosmic_spacer
26 nes_ord Q04771 398 SYKRVDIWAFGLVLWE HHHHHHHHHHHHHHHH c1a-AT-4 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 NA cosmic_spacer
27 nes_ord Q04771 437 NDPSFEDMRKVVCVDQ CCCCHHHHHHHHEECC c1d-4 ORD middle|STKc_ACVR1_ALK1; middle|S_TKc; 0.0 Bad: -22.762 cosmic_spacer
28 nes_diso Q04771 480 QNPSARLTALRIKK CCHHHHHHHHHHHH c2-AT-4 boundary boundary|STKc_ACVR1_ALK1; boundary|S_TKc; 0.0 NA cosmic_spacer
29 nes_diso Q04771 494 TLTKIDNSLDKLKT HHHHHHHHHHHCCC c3-4 boundary boundary|STKc_ACVR1_ALK1; boundary|S_TKc; 0.0 Bad: -26.735 cosmic_phi_to_LIVMF
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.