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Q07864_DPOE1 | DNA polymerase epsilon catalytic subunit A   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q07864 153 IRLSFHTVEDLVKVRK EEEEECCHHHHHHHHH c1aR-4 boundary middle|PolB; 0.14 Weak: -30.61 cosmic_phi Weak|
2 nes_diso Q07864 207 TSKKIADQLDNIVDMRE HHHHHHHHHHCCCEEEH c1c-4 boundary middle|PolB; 0.0 Bad: -24.103 cosmic_phi
3 nes_diso Q07864 222 REYDVPYHIRLSIDLKI EHHHCCHHHHECCCCCC c1c-4 boundary middle|PolB; 0.12 NA cosmic_spacer
4 nes_diso Q07864 226 VPYHIRLSIDLKIHVAH CCHHHHECCCCCCCCCE c1c-4 boundary middle|PolB; 0.12 NA cosmic_phi_to_LIVMF
5 nes_diso Q07864 272 LAFDIETTKLPLKF EEEEEEECCCCCCC c2-AT-4 boundary middle|PolB; boundary|DNA_polB_epsilon_exo; 0.57 NA cosmic_spacer
6 nes_ord Q07864 309 NREIVSEDIEDFEFTP CCCEECCCCCCCCCCC c1a-4 ORD middle|PolB; middle|DNA_polB_epsilon_exo; 0.14 Bad: -24.715 cosmic_spacer
7 nes_diso Q07864 370 PFVEARAAVHGLSMQQ HHHHHHHHHCCCCHHH c1a-AT-5 boundary middle|PolB; middle|DNA_polB_epsilon_exo; 0.0 NA cosmic_spacer
8 nes_ord Q07864 460 VSDAVATYYLYMKY HHHHHHHHHHHHHH c2-AT-4 ORD middle|PolB; boundary|DNA_polB_epsilon_exo; 0.0 NA cosmic_spacer
9 nes_diso Q07864 467 YYLYMKYVHPFIFALC HHHHHHHHHHHHHHHH c1aR-5 boundary middle|PolB; boundary|DNA_polB_epsilon_exo; 0.0 Bad: -27.142 cosmic_phi_to_LIVMF
10 nes_diso Q07864 470 YMKYVHPFIFALCT HHHHHHHHHHHHHC c3-4 boundary middle|PolB; boundary|DNA_polB_epsilon_exo; 0.0 Bad: -28.943 cosmic_phi_to_LIVMF
11 nes_diso Q07864 473 YVHPFIFALCTIIP HHHHHHHHHHCCCC c3-4 boundary middle|PolB; boundary|DNA_polB_epsilon_exo; 0.0 Bad: -27.925 cosmic_phi_to_LIVMF
12 nes_diso Q07864 502 EALLMVQAFHANIIFPN HHHHHHHHHHCCCEECC c1c-4 boundary middle|PolB; boundary|DNA_polB_epsilon_exo; boundary|POLBc_epsilon; 0.0 Weak: -32.982 cosmic_phi_to_LIVMF Weak|
13 nes_diso Q07864 503 ALLMVQAFHANIIFPN HHHHHHHHHCCCEECC c1aR-4 boundary middle|PolB; boundary|DNA_polB_epsilon_exo; boundary|POLBc_epsilon; 0.0 Medium: -36.374 cosmic_spacer Medium|
14 nes_diso Q07864 558 CRFRMNPAAFDFLLQR HHHHCCHHHHHHHHHH c1a-AT-4 boundary middle|PolB; middle|POLBc_epsilon; 0.0 NA cosmic_spacer
15 nes_diso Q07864 567 FDFLLQRVEKTLRHAL HHHHHHHHHHHHHHHH c1aR-4 boundary middle|PolB; middle|POLBc_epsilon; 0.0 Medium: -39.65 cosmic_phi Medium|
16 nes_diso Q07864 613 VPSRIECPLIYHLDVGA CCCCCCCCCEEEECHHH c1c-4 boundary middle|PolB; middle|POLBc_epsilon; 0.38 NA cosmic_spacer
17 nes_diso Q07864 623 YHLDVGAMYPNIILTN EEECHHHHCCHHHCCC c1aR-4 boundary middle|PolB; middle|POLBc_epsilon; 0.0 Medium: -33.515 cosmic_phi_to_LIVMF Medium|
18 nes_diso Q07864 735 HITKVEERLTTICQ CCCEEEECCCEECC c3-4 boundary middle|PolB; middle|POLBc_epsilon; 0.57 NA cosmic_spacer
19 nes_diso Q07864 793 RCKNMEVLYDSLQLAH HHHHHHHHHHHHHHHH c1d-4 boundary middle|PolB; middle|POLBc_epsilon; 0.0 Medium: -38.296 cosmic_spacer Medium|
20 nes_beta_diso Q07864 961 EDGSLAELKGFEVKR CCCCEEEEEECEEEE c1b-4 boundary middle|PolB; middle|POLBc_epsilon; 0.86 NA cosmic_spacer
21 nes_diso Q07864 998 TLEEVYGSVAKVAD CHHHHHHHHHHHHH c3-4 boundary middle|PolB; middle|POLBc_epsilon; 0.0 Bad: -25.371 cosmic_spacer
22 nes_diso Q07864 1133 YIERLGSAIQKIITIPA HHHHHHHHHHHHHHHHH c1c-5 boundary boundary|PolB; boundary|POLBc_epsilon; 0.0 Bad: -28.643 cosmic_phi_to_LIVMF
23 nes_diso Q07864 1133 YIERLGSAIQKIIT HHHHHHHHHHHHHH c3-4 boundary boundary|PolB; boundary|POLBc_epsilon; 0.0 Weak: -32.556 cosmic_phi_to_LIVMF Weak|
24 nes_diso Q07864 1143 KIITIPAALQQVKNPVPR HHHHHHHHHCCCCCCCCC c4-5 boundary boundary|PolB; boundary|POLBc_epsilon; 0.0 Strong: -40.588 cosmic_phi_to_LIVMF Strong|
25 nes_diso Q07864 1143 KIITIPAALQQVKN HHHHHHHHHCCCCC c3-4 boundary boundary|PolB; boundary|POLBc_epsilon; 0.0 Weak: -32.629 cosmic_phi_to_LIVMF Weak|
26 nes_diso Q07864 1208 SAPDMEDFGLVKLPH CCCCHHHCCCCCCCC c1b-4 DISO 0.0 Weak: -30.319 cosmic_phi Weak|
27 nes_diso Q07864 1315 LGSFLRRTARSILDLPW HHHHHHHHHHHHHHCCC c1c-AT-4 boundary 0.0 NA cosmic_spacer
28 low complexity Q07864 1325 SILDLPWQIVQISE HHHHCCCEEEEEEE c3-4 boundary 0.43 Bad: -23.742 cosmic_spacer
29 nes_beta_diso Q07864 1347 LWALVGSDLHCIRLSI EEEEECCEEEEEEEEE c1a-4 boundary 0.71 NA cosmic_spacer
30 nes_diso Q07864 1427 YETQVPLLFRALVHLGC CCCCCCHHHHHHHHHCC c1c-4 boundary 0.0 Bad: -26.017 cosmic_spacer
31 low complexity Q07864 1430 QVPLLFRALVHLGC CCCHHHHHHHHHCC c3-4 boundary 0.0 Weak: -32.139 cosmic_spacer
32 nes_diso Q07864 1435 FRALVHLGCVCVVN HHHHHHHCCEEEEC c2-4 boundary 0.14 Bad: -25.061 cosmic_spacer
33 nes_diso Q07864 1459 EAETFALEHLEMRS CCCCCCHHHCEECC c2-4 boundary 0.0 Weak: -30.704 cosmic_phi_to_LIVMF Weak|
34 nes_beta_diso Q07864 1491 HHAQAHKALFGIFIPS EEEECCEEEEEEEECC c1a-AT-4 boundary boundary|DUF1744; 0.71 NA cosmic_spacer
35 nes_diso Q07864 1534 HGLLLEKVGPELLPPP HHHHHHHHCCCCCCCC c1aR-4 boundary boundary|DUF1744; 0.0 Bad: -25.127 cosmic_spacer
36 nes_diso Q07864 1560 DLKTICRAIQRFLLAY CHHHHHHHHHHHHHHH c1a-5 boundary middle|DUF1744; 0.0 Medium: -36.83 cosmic_spacer Medium|
37 nes_ord Q07864 1625 QRHGARRMIRHYLNLDT HHHHHHHHHHHHHCHHH c1c-AT-4 ORD middle|DUF1744; 0.0 NA cosmic_spacer
38 nes_ord Q07864 1635 HYLNLDTCLSQAFEMSR HHHCHHHHHHHHHHHHH c1c-4 ORD middle|DUF1744; 0.0 Bad: -24.421 cosmic_spacer
39 nes_ord Q07864 1645 QAFEMSRYFHIPIGNLP HHHHHHHHCCCCCCCCC c1cR-5 ORD middle|DUF1744; 0.0 NA cosmic_spacer
40 nes_ord Q07864 1649 MSRYFHIPIGNLPEDIST HHHHCCCCCCCCCCCHHH c4-4 ORD middle|DUF1744; 0.0 NA cosmic_spacer
41 nes_ord Q07864 1656 PIGNLPEDISTFGS CCCCCCCCHHHHHH c3-4 ORD middle|DUF1744; 0.0 Bad: -20.653
42 nes_beta_diso Q07864 1723 STVCVELDLQNLAVNT CCEEEEEEECHHHHHH c1a-4 boundary middle|DUF1744; 0.71 NA cosmic_spacer
43 nes_diso Q07864 1725 VCVELDLQNLAVNT EEEEEEECHHHHHH c2-4 boundary middle|DUF1744; 0.57 NA cosmic_phi_to_LIVMF
44 nes_diso Q07864 1787 LCSNTFRILKSMVVGW CCHHHHHHHHHHHHHH c1a-AT-4 boundary middle|DUF1744; 0.0 NA cosmic_spacer
45 nes_diso Q07864 1788 CSNTFRILKSMVVGW CHHHHHHHHHHHHHH c1b-4 boundary middle|DUF1744; 0.0 NA cosmic_phi_to_LIVMF
46 nes_ord Q07864 1837 LHRTLHNMMKKLFLQL HHHHHHHHHHHHHHHH c1a-4 ORD middle|DUF1744; 0.0 NA cosmic_spacer
47 nes_ord Q07864 1848 LFLQLIAEFKRLGS HHHHHHHHHHHCCC c3-4 ORD middle|DUF1744; 0.0 Medium: -37.302 cosmic_phi
48 nes_ord Q07864 1860 GSSVIYANFNRIILCT CCEEEEECCCEEEEEC c1a-4 ORD middle|DUF1744; 0.57 NA cosmic_spacer
49 nes_diso Q07864 1996 FLMIVSAYIVAVYH HHHHHHHHHHHHHH c3-4 boundary 0.0 Bad: -26.964 cosmic_phi_to_LIVMF
50 nes_diso Q07864 2062 SFFTITQKIQKKVTGSR HHHHHHHHHHHHHCCCC c1cR-4 boundary 0.0 Bad: -28.586
51 nes_diso Q07864 2100 PALEFIKYVCKVLSLDT HHHHHHHHHHHHHCCCC c1c-4 boundary 0.0 Bad: -26.108 cosmic_phi_to_LIVMF
52 nes_diso Q07864 2121 QVNKLNRDLLRLVDVGE HHHHHHHHHHHHCCCCC c1c-5 boundary 0.0 Weak: -32.848 cosmic_phi_to_LIVMF Weak|
53 nes_diso Q07864 2121 QVNKLNRDLLRLVD HHHHHHHHHHHHCC c3-4 boundary 0.0 Medium: -34.579 cosmic_phi_to_LIVMF Medium|
54 nes_diso Q07864 2195 DSSAIEMTLVEVLQ CHHHHHHHHHHHHH c2-4 boundary 0.0 Bad: -28.144 cosmic_phi_to_LIVMF
55 nes_ord Q07864 2203 LVEVLQKKLMAFTLQD HHHHHHHHHHHHHCCC c1a-5 ORD 0.0 Medium: -38.508 cosmic_spacer
56 nes_ord Q07864 2238 CAGDFALTIHTQVFMEQ CCCEEEECCCHHHHHHH c1c-4 ORD 0.38 Bad: -24.765 cosmic_spacer
57 nes_ord Q07864 2246 IHTQVFMEQIGIFR CCHHHHHHHHHHHH c2-4 ORD 0.0 Medium: -33.312 cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.