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Q13315_ATM | Serine-protein kinase ATM   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q13315 64 LQKYIQKETECLRIAK HHHHHHHHHHHHHHCC c1a-AT-4 boundary middle|TAN; 0.0 NA
2 nes_diso Q13315 93 KMQEISSLVKYFIK HHHHHHHHHHHHHH c3-4 boundary middle|TAN; 0.0 Medium: -36.21 cosmic_phi_to_LIVMF Medium|
3 nes_diso Q13315 161 QQQWLELFSVYFRL HHHHHHHHHHHHHH c2-4 boundary boundary|TAN; 0.0 Bad: -18.19
4 nes_diso Q13315 163 QWLELFSVYFRLYLKP HHHHHHHHHHHHHCCC c1aR-4 boundary boundary|TAN; 0.0 Medium: -33.798 cosmic_phi Medium|
5 nes_diso Q13315 225 SSSGLNHILAALTIFL CHHHHHHHHHHHHHHH c1a-4 boundary 0.0 Bad: -27.442 cosmic_phi
6 nes_diso Q13315 232 ILAALTIFLKTLAVNF HHHHHHHHHHHHHHHH c1a-5 boundary 0.0 Medium: -36.709 cosmic_phi Medium|
7 nes_diso Q13315 267 TQHRLNDSLKEVIIEL HHCCCCHHHHHHHHHH c1a-4 boundary 0.0 Weak: -30.293 cosmic_phi Weak|
8 nes_diso Q13315 274 SLKEVIIELFQLQIYI HHHHHHHHHHHHHHHH c1a-5 boundary 0.0 Strong: -41.804 cosmic_phi Strong|
9 nes_diso Q13315 307 KWRSILYNLYDLLVNE HHHHHHHHHHHHHHHH c1a-4 boundary 0.0 Weak: -32.552 cosmic_spacer Weak|
10 nes_diso Q13315 353 CHQVFNEDTRSLEISQ HHHHHCCCCCCEEEEC c1a-AT-4 DISO 0.0 NA cosmic_spacer
11 low complexity Q13315 431 ELSPLLMILSQLLP HHHHHHHHHHHHHH c3-4 boundary 0.0 Weak: -31.28 cosmic_spacer
12 nes_diso Q13315 451 RTPYVLRCLTEVALCQ CHHHHHHHHHHHHHHH c1a-4 boundary 0.0 Bad: -27.767 cosmic_phi
13 nes_diso Q13315 496 SSEQIQAENFGLLG CHHHHHHHHHHHHH c2-AT-4 boundary 0.0 NA cosmic_spacer
14 nes_diso Q13315 546 LTTSIVPGTVKMGIEQ HHHCCCCCCCCCCCCC c1a-AT-4 boundary 0.0 NA cosmic_spacer
15 nes_diso Q13315 559 IEQNMCEVNRSFSLKE CCCCCCCCCCCCCHHH c1d-4 boundary 0.0 Medium: -35.568 cosmic_phi Medium|
16 nes_diso Q13315 568 RSFSLKESIMKWLLFYQ CCCCHHHHHHHHHHHCC c1cR-4 DISO 0.0 Bad: -19.7 cosmic_phi
17 nes_diso Q13315 578 KWLLFYQLEGDLENST HHHHHCCCCCCHHHCC c1aR-4 boundary 0.0 Medium: -34.203 Medium|
18 nes_diso Q13315 599 LHSNFPHLVLEKILVSL CCCCCCHHHHHHHHHHH c1c-4 __ 0.0 Bad: -28.607 cosmic_spacer
19 low complexity Q13315 602 NFPHLVLEKILVSL CCCHHHHHHHHHHH c2-5 __ 0.0 Bad: -23.028 cosmic_phi
20 nes_diso Q13315 603 FPHLVLEKILVSLTMKN CCHHHHHHHHHHHHCCC c1c-4 boundary 0.0 Bad: -26.539 cosmic_phi_to_LIVMF
21 nes_diso Q13315 604 PHLVLEKILVSLTMKN CHHHHHHHHHHHHCCC c1a-4 boundary 0.0 Strong: -41.835 cosmic_phi_to_LIVMF Strong|
22 nes_diso Q13315 604 PHLVLEKILVSLTMKN CHHHHHHHHHHHHCCC c1aR-4 boundary 0.0 Medium: -39.895 cosmic_phi Medium|
23 nes_diso Q13315 641 EELSFSEVEELFLQTT CCCCHHHHHHHHHHEE c1aR-4 DISO 0.0 Medium: -36.349 cosmic_spacer Medium|
24 nes_diso Q13315 649 EELFLQTTFDKMDFLT HHHHHHEECCCCCCCC c1a-4 DISO 0.29 Medium: -37.001 cosmic_phi_to_LIVMF Medium|
25 nes_diso Q13315 678 IGFSVHQNLKESLDRCL CCCCCCHHHHHHHHHHH c1cR-4 DISO 0.0 Bad: -20.222 cosmic_phi_to_LIVMF
26 nes_diso Q13315 748 KAKSLMQCAGESITLFK HHHHHHHHHHHHHHHHC c1c-AT-4 DISO 0.0 NA cosmic_spacer
27 nes_diso Q13315 759 SITLFKNKTNEEFRIGS HHHHHCCCCCCCHHHHH c1c-AT-5 DISO 0.0 NA cosmic_spacer
28 nes_diso Q13315 769 EEFRIGSLRNMMQLCT CCHHHHHHHHHHHHHH c1aR-4 DISO 0.0 Medium: -37.813 cosmic_spacer Medium|
29 nes_diso Q13315 800 SGFFLRLLTSKLMNDI CHHHHHHHCHHHHHHH c1aR-4 DISO 0.0 Bad: -26.701 cosmic_spacer
30 nes_diso Q13315 814 DIADICKSLASFIK HHHHHHHHHHHCCC c3-4 DISO 0.0 Strong: -42.031 cosmic_phi Strong|
31 nes_diso Q13315 892 KQDLLFLDMLKFLCLCV HHHHHHHHHHHHHHHHC c1c-4 boundary 0.0 Medium: -34.453 cosmic_phi Medium|
32 nes_diso Q13315 892 KQDLLFLDMLKFLC HHHHHHHHHHHHHH c2-4 boundary 0.0 Bad: -28.225 cosmic_phi
33 nes_diso Q13315 893 QDLLFLDMLKFLCLCV HHHHHHHHHHHHHHHC c1aR-4 boundary 0.0 Medium: -36.893 cosmic_phi Medium|
34 nes_diso Q13315 893 QDLLFLDMLKFLCLCV HHHHHHHHHHHHHHHC c1a-4 boundary 0.0 Medium: -34.288 cosmic_spacer Medium|
35 nes_diso Q13315 897 FLDMLKFLCLCVTT HHHHHHHHHHHCCC c2-5 boundary 0.0 Bad: -24.125 cosmic_spacer
36 nes_diso Q13315 938 PTKSLHLHMYLMLLKE CCCHHHHHHHHHHHHH c1a-4 DISO 0.0 Strong: -40.614 cosmic_spacer Strong|
37 nes_diso Q13315 940 KSLHLHMYLMLLKE CHHHHHHHHHHHHH c2-4 DISO 0.0 Bad: -28.301 cosmic_spacer
38 nes_diso Q13315 965 DVLELLKPLSNVCS HHHHHHHHHHHHHH c3-4 boundary 0.0 Medium: -34.713 cosmic_spacer Medium|
39 nes_diso Q13315 990 ILNHVLHVVKNLGQ HHHHHHHHHHHHCC c3-4 boundary 0.0 Bad: -27.302 cosmic_phi
40 nes_diso Q13315 1034 YIFSVRMALVNCLKTLL CCHHHHHHHHHHHHHHH c1cR-5 boundary 0.0 Medium: -37.9 cosmic_phi_to_LIVMF Medium|
41 nes_diso Q13315 1038 VRMALVNCLKTLLEADP HHHHHHHHHHHHHHHCC c1cR-4 boundary 0.0 Medium: -36.623 cosmic_phi Medium|
42 nes_diso Q13315 1149 NRKSVLLTLIAVVLSC HHHHHHHHHHHHHHHC c1a-4 boundary 0.0 Weak: -31.291 Weak|
43 nes_diso Q13315 1149 NRKSVLLTLIAVVL HHHHHHHHHHHHHH c2-4 boundary 0.0 Medium: -36.622 Medium|
44 nes_diso Q13315 1151 KSVLLTLIAVVLSCSP HHHHHHHHHHHHHCCH c1aR-4 boundary 0.0 Medium: -36.274 cosmic_spacer Medium|
45 low complexity Q13315 1151 KSVLLTLIAVVLSC HHHHHHHHHHHHHC c2-4 boundary 0.0 Weak: -30.362
46 nes_diso Q13315 1206 LEDFMASHLDYLVLEW HHHHHHHCHHHHHHHH c1a-4 boundary 0.0 Medium: -33.808 cosmic_phi Medium|
47 nes_diso Q13315 1283 LTDCFPKILVNILPYFAY HHHCHHHHHHHHHHHHHH c4-4 boundary 0.0 Medium: -33.787 cosmic_phi Medium|
48 nes_diso Q13315 1324 SENLLGKQIDHLFISN HCCCCHHHHHHHHHHC c1a-4 __ 0.0 Bad: -29.412 cosmic_phi_to_LIVMF
49 nes_diso Q13315 1336 FISNLPEIVVELLMTL HHHCHHHHHHHHHHHC c1a-5 boundary 0.0 Medium: -34.003 cosmic_phi_to_LIVMF Medium|
50 nes_diso Q13315 1437 RILKIYHLFVSLLLKD HHHHHHHHHHHHHHHH c1a-5 __ 0.0 Medium: -38.221 cosmic_phi Medium|
51 nes_diso Q13315 1461 WAFVLRDVIYTLIHYI HHHHHHHHHHHHHHHH c1aR-4 boundary 0.0 Medium: -37.343 cosmic_spacer_Pro Medium|
52 nes_diso Q13315 1480 PSCIMDVSLRSFSLCC CHHHHHHHHHHHHHHH c1a-4 boundary 0.0 Weak: -32.033 cosmic_spacer Weak|
53 nes_diso Q13315 1482 CIMDVSLRSFSLCC HHHHHHHHHHHHHH c2-5 boundary 0.0 Medium: -36.43 cosmic_spacer Medium|
54 nes_diso Q13315 1489 RSFSLCCDLLSQVCQTA HHHHHHHHHHHHHHHHH c1cR-4 boundary 0.0 Medium: -35.825 Medium|
55 nes_ord Q13315 1513 LENHLHVIVGTLIPLVYE HHHHHHHHHHHHHHHHHC c4-4 ORD 0.0 Bad: -27.448 cosmic_phi_to_LIVMF
56 nes_diso Q13315 1520 IVGTLIPLVYEQVEVQK HHHHHHHHHHCCHHHHH c1c-5 boundary 0.0 Medium: -33.497 cosmic_spacer Medium|
57 nes_diso Q13315 1534 VQKQVLDLLKYLVIDN HHHHHHHHHHHHHHHC c1a-4 boundary 0.0 Medium: -37.142 cosmic_phi_to_LIVMF Medium|
58 nes_diso Q13315 1565 FPDHVVFKDLRITQ CCCCHHHHHHHHHH c2-4 boundary 0.0 Medium: -36.873 cosmic_spacer Medium|
59 nes_diso Q13315 1586 GPFSLLEEINHFLSVSV CCCCHHHHHHHHHHHHC c1c-4 DISO 0.0 Weak: -30.973 cosmic_phi_to_LIVMF Weak|
60 nes_diso Q13315 1610 RLEGLKDLRRQLELHK HHHHHHHHHHHHHHCH c1d-5 DISO 0.0 Bad: -28.329 cosmic_spacer
61 nes_diso Q13315 1640 QDGIMVKLVVNLLQLSK CCCHHHHHHHHHHHHHH c1c-4 boundary 0.0 Medium: -38.085 cosmic_phi Medium|
62 nes_diso Q13315 1641 DGIMVKLVVNLLQLSK CCHHHHHHHHHHHHHH c1a-4 boundary 0.0 Bad: -24.902 cosmic_phi
63 low complexity Q13315 1643 IMVKLVVNLLQLSK HHHHHHHHHHHHHH c2-5 boundary 0.0 Medium: -33.781 cosmic_phi
64 low complexity Q13315 1643 IMVKLVVNLLQLSK HHHHHHHHHHHHHH c3-4 boundary 0.0 Medium: -33.15 cosmic_phi
65 nes_diso Q13315 1648 VVNLLQLSKMAINH HHHHHHHHHHHHCC c2-5 boundary 0.0 Medium: -36.569 Medium|
66 nes_diso Q13315 1667 VLEAVGSCLGEVGP HHHHHHHHHHHHCC c3-4 boundary 0.0 Bad: -26.533 cosmic_spacer
67 nes_diso Q13315 1677 EVGPIDFSTIAIQH HHCCCCHHHEEEEC c2-5 boundary 0.14 Medium: -34.065 cosmic_phi_to_LIVMF Medium|
68 nes_diso Q13315 1711 TFIMLTYLNNTLVEDC HHHHHHHHHHHHCCCH c1aR-4 boundary 0.0 Bad: -22.763 cosmic_phi_to_LIVMF
69 nes_diso Q13315 1782 KENPFEGLDDINLWI CCCCCCCCCCCCCCC c1b-4 boundary 0.0 Bad: -23.149 cosmic_phi_to_LIVMF
70 nes_ord Q13315 1822 EILQLLKPMCEVKT HHHHHHHHHHCCCH c3-4 ORD 0.0 NA cosmic_spacer
71 nes_diso Q13315 1837 FCQTVLPYLIHDILLQD HHHHHHHHHHHHHHCCC c1c-4 boundary 0.0 Bad: -27.049 cosmic_phi_to_LIVMF
72 nes_diso Q13315 1838 CQTVLPYLIHDILLQD HHHHHHHHHHHHHCCC c1a-4 boundary 0.0 Medium: -36.373 cosmic_spacer Medium|
73 nes_diso Q13315 1928 FNDAFWLDLNYLEVAK CCCCCCCCCCHHHHHH c1a-4 boundary 0.0 Bad: -27.551 cosmic_phi_to_LIVMF
74 nes_diso Q13315 1930 DAFWLDLNYLEVAK CCCCCCCCHHHHHH c2-4 boundary 0.0 Weak: -31.221 cosmic_phi_to_LIVMF Weak|
75 nes_diso Q13315 1995 EETGISLQDLLLEI CCCCCCHHHHHHHH c2-4 boundary 0.0 Medium: -33.533 cosmic_phi_to_LIVMF Medium|
76 nes_diso Q13315 1997 TGISLQDLLLEIYRSI CCCCHHHHHHHHHHHC c1aR-4 boundary 0.0 Medium: -34.268 cosmic_phi_to_LIVMF Medium|
77 nes_diso Q13315 2060 RQAGIIQALQNLGLCH HHHHHHHHHHHCCCHH c1a-4 boundary 0.0 Medium: -35.024 cosmic_spacer Medium|
78 nes_diso Q13315 2069 QNLGLCHILSVYLKG HHCCCHHHHHHHHHH c1b-4 boundary boundary|FAT; 0.0 Medium: -37.205 cosmic_spacer Medium|
79 nes_diso Q13315 2165 SVYSLYPTLSRLQA HHHHHHHHHHHHHH c3-4 boundary middle|FAT; 0.0 Medium: -33.387 cosmic_spacer Medium|
80 nes_diso Q13315 2190 SRSVTHRQLSEVYIKW CCCCCCHHHHHHHHHH c1a-AT-4 boundary middle|FAT; 0.0 NA
81 nes_diso Q13315 2222 PIMALRTVILEILMEK HHHHHHHHHHHHHHHH c1a-5 boundary middle|FAT; 0.0 Medium: -33.802 cosmic_phi Medium|
82 nes_diso Q13315 2247 IKDILTKHLVELSILA HHHHHHHHHHHHHHHH c1a-4 boundary middle|FAT; 0.0 Medium: -37.257 cosmic_phi Medium|
83 nes_diso Q13315 2254 HLVELSILARTFKNTQ HHHHHHHHHHHCCCCH c1aR-4 __ middle|FAT; 0.0 Bad: -26.962 cosmic_phi
84 nes_diso Q13315 2305 QSLALSILKQMIKKLD HHHHHHHHHHHHHHHH c1aR-5 boundary middle|FAT; 0.0 Bad: -28.487 cosmic_phi
85 nes_diso Q13315 2308 ALSILKQMIKKLDA HHHHHHHHHHHHHH c3-4 boundary middle|FAT; 0.0 Medium: -33.269 cosmic_spacer Medium|
86 nes_diso Q13315 2353 PAVIMQTYLEKAVEVAG HHHHHHHHHHHHHHHHH c1c-4 boundary middle|FAT; 0.0 Bad: -28.32 cosmic_phi_to_LIVMF
87 nes_diso Q13315 2412 NKQALLKRAKEEVGLLR HHHHHHHHHHHHHHHHH c1c-AT-4 boundary middle|FAT; 0.0 NA cosmic_spacer
88 nes_diso Q13315 2441 VQRELELDELALRA HHHHHHHCHHHHHH c2-4 boundary middle|FAT; 0.0 Medium: -34.648 cosmic_phi Medium|
89 nes_diso Q13315 2523 LAARMGTKMMGGLGFHE HHHHHCCCCCCCHHHHH c1c-4 boundary boundary|FAT; 0.0 Weak: -31.805 cosmic_phi_to_LIVMF Weak|
90 nes_diso Q13315 2533 GGLGFHEVLNNLISRI CCHHHHHHHHHHHHHH c1aR-4 __ 0.0 Weak: -30.442 cosmic_spacer Weak|
91 nes_diso Q13315 2536 GFHEVLNNLISRISMDH HHHHHHHHHHHHHHHHC c1c-5 boundary 0.0 Weak: -30.438 cosmic_spacer Weak|
92 nes_diso Q13315 2537 FHEVLNNLISRISMDH HHHHHHHHHHHHHHHC c1a-4 boundary 0.0 Bad: -23.279 cosmic_phi_to_LIVMF
93 nes_diso Q13315 2552 HPHHTLFIILALAN CHHHHHHHHHHHHH c2-AT-4 boundary 0.0 NA cosmic_spacer
94 nes_diso Q13315 2652 PITKLKNLEDVVVPT CCCCCCCCCCCCCCC c1b-5 boundary boundary|PIKKc_ATM; 0.0 Bad: -28.244 cosmic_phi_to_LIVMF
95 nes_diso Q13315 2658 NLEDVVVPTMEIKVDH CCCCCCCCCCCCCCCC c1a-AT-5 boundary boundary|PIKKc_ATM; 0.0 NA cosmic_spacer
96 nes_beta_diso Q13315 2678 GNLVTIQSFKAEFRLAG CCCCEEEEECCEEEECC c1c-AT-4 boundary boundary|PIKKc_ATM; boundary|PI3Kc; 0.75 NA cosmic_spacer
97 nes_beta_diso Q13315 2679 NLVTIQSFKAEFRLAG CCCEEEEECCEEEECC c1d-5 boundary boundary|PIKKc_ATM; boundary|PI3Kc; 0.71 NA cosmic_phi
98 nes_diso Q13315 2684 QSFKAEFRLAGGVNLPK EEECCEEEECCCCCCCE c1c-AT-4 boundary boundary|PIKKc_ATM; boundary|PI3Kc; 0.5 NA cosmic_spacer
99 nes_ord Q13315 2770 CTGTVPIGEFLVNN CCCCCCHHHHHHHC c2-4 ORD middle|PIKKc_ATM; middle|PI3Kc; 0.0 Medium: -37.476 cosmic_spacer
100 nes_ord Q13315 2823 VCQNFQPVFRYFCMEK HHHHCCHHHHHHHHHH c1a-4 ORD middle|PIKKc_ATM; middle|PI3Kc; 0.0 Bad: -27.506 cosmic_phi
101 nes_ord Q13315 2832 RYFCMEKFLDPAIWFEK HHHHHHHCCCHHHHHHH c1cR-4 ORD middle|PIKKc_ATM; middle|PI3Kc; 0.0 NA cosmic_spacer
102 nes_ord Q13315 2854 RSVATSSIVGYILGLGD HHHHHHHHHHHHHCCCC c1c-AT-4 ORD middle|PIKKc_ATM; middle|PI3Kc; 0.0 NA cosmic_spacer
103 nes_beta_ord Q13315 2881 QSAELVHIDLGVAFEQ CCCCEEEEECCCHHCC c1d-4 ORD middle|PIKKc_ATM; middle|PI3Kc; 0.71 NA cosmic_phi
104 nes_diso Q13315 2906 VPFRLTRDIVDGMGITG CCCCCCCCCHHHCCCCC c1c-4 boundary middle|PIKKc_ATM; middle|PI3Kc; 0.0 Bad: -27.489 cosmic_spacer
105 nes_diso Q13315 2916 DGMGITGVEGVFRRCC HHCCCCCCCCHHHHHH c1aR-4 boundary middle|PIKKc_ATM; middle|PI3Kc; 0.0 Bad: -25.449 cosmic_phi_to_LIVMF
106 nes_diso Q13315 2942 QETLLTIVEVLLYD HHHHHHHHHHHHHC c2-4 boundary boundary|PIKKc_ATM; boundary|PI3Kc; 0.0 Bad: -29.831 cosmic_phi
107 nes_diso Q13315 2957 LFDWTMNPLKALYLQQ CCCCCCCHHHHHHHHC c1a-AT-5 boundary boundary|PIKKc_ATM; boundary|PI3Kc; 0.0 NA cosmic_spacer
108 nes_diso Q13315 2958 FDWTMNPLKALYLQQ CCCCCCHHHHHHHHC c1b-4 boundary boundary|PIKKc_ATM; boundary|PI3Kc; 0.0 NA cosmic_phi_to_LIVMF
109 nes_diso Q13315 2994 NLSDIDQSFNKVAE CCCCCCHHHHHHHH c3-4 DISO boundary|PIKKc_ATM; boundary|PI3Kc; 0.0 Weak: -31.005 cosmic_spacer Weak|
110 nes_diso Q13315 3009 VLMRLQEKLKGVEE HHHHHHHHHCCCCC c3-4 DISO 0.0 Bad: -27.749 cosmic_spacer
111 nes_diso Q13315 3024 TVLSVGGQVNLLIQ CCCCHHHHHHHHHH c3-4 boundary 0.0 Bad: -28.28 cosmic_phi_to_LIVMF
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.