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Q14191_WRN | Werner syndrome ATP-dependent helicase   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_beta_diso Q14191 93 KLGKVALIQLCVSE CCCEEEEEEEECCC c2-5 DISO middle|RNaseD_like; 1.0 NA cosmic_spacer
2 nes_diso Q14191 108 KCYLFHVSSMSVFP CEEEEEHHHCCCCC c2-4 DISO middle|RNaseD_like; 0.43 NA cosmic_spacer
3 nes_diso Q14191 116 SMSVFPQGLKMLLE HCCCCCHHHHHHHC c3-4 DISO middle|RNaseD_like; 0.0 Weak: -30.904 cosmic_spacer Weak|
4 nes_diso Q14191 147 LLRDFDIKLKNFVELTD HHHHCCCCCCCHHHHHH c1c-5 DISO middle|RNaseD_like; 0.0 Bad: -29.23
5 nes_diso Q14191 147 LLRDFDIKLKNFVE HHHHCCCCCCCHHH c3-4 DISO middle|RNaseD_like; 0.0 Bad: -22.646
6 nes_diso Q14191 215 TDAYAGFIIYRNLEILD HHHCHHHHHHHHHHCCC c1c-AT-4 boundary boundary|RNaseD_like; 0.0 NA
7 nes_diso Q14191 226 NLEILDDTVQRFAINK HHHCCCCCCCCEEHHH c1a-5 boundary boundary|RNaseD_like; 0.0 Medium: -35.336 Medium|
8 nes_diso Q14191 243 EEILLSDMNKQLTSIS HHHCHHHHHHHHHHHH c1aR-5 DISO boundary|RNaseD_like; 0.0 Bad: -28.12 cosmic_spacer
9 nes_diso Q14191 246 LLSDMNKQLTSISE CHHHHHHHHHHHHH c3-4 DISO boundary|RNaseD_like; 0.0 Bad: -29.128 cosmic_spacer
10 nes_diso Q14191 253 QLTSISEEVMDLAK HHHHHHHHHHHHHH c3-4 DISO boundary|RNaseD_like; 0.0 Bad: -27.36
11 nes_diso Q14191 260 EVMDLAKHLPHAFSKLE HHHHHHHHCCCCHHHCC c1cR-5 boundary boundary|RNaseD_like; 0.0 Bad: -22.252
12 nes_diso Q14191 281 VSILLKDISENLYSLR HHHHHHHHHHHHHHHH c1aR-5 boundary 0.0 Weak: -31.758 cosmic_spacer Weak|
13 nes_diso Q14191 284 LLKDISENLYSLRR HHHHHHHHHHHHHH c3-4 boundary 0.0 Bad: -26.882 cosmic_spacer
14 nes_diso Q14191 386 NMERACLMSLDITE HHCCCCCCCCCCHH c2-AT-5 DISO 0.0 NA cosmic_spacer
15 nes_diso Q14191 582 QYPPVYVGKIGLVI CHHHHHCCCEEEEE c2-4 boundary middle|DEXHc_RecQ3; middle|recQ_fam; 0.14 Bad: -24.757 cosmic_spacer
16 low complexity Q14191 590 KIGLVISPLISLME CEEEEECCCHHHHH c3-4 boundary middle|DEXHc_RecQ3; middle|recQ_fam; 0.43 Medium: -36.045 cosmic_phi_to_LIVMF
17 nes_diso Q14191 598 LISLMEDQVLQLKMSN CHHHHHHHHHHHHHCC c1a-5 boundary middle|DEXHc_RecQ3; middle|recQ_fam; 0.0 Medium: -35.286 Medium|
18 nes_diso Q14191 607 LQLKMSNIPACFLGSA HHHHHCCCCCHHCCCC c1aR-4 boundary middle|DEXHc_RecQ3; middle|recQ_fam; 0.0 Bad: -21.652 cosmic_spacer
19 nes_diso Q14191 648 GNMGLLQQLEADIGITL CCHHHHHHHHHHCCCCE c1c-4 boundary middle|DEXHc_RecQ3; middle|recQ_fam; 0.0 Weak: -32.873 cosmic_spacer Weak|
20 nes_diso Q14191 656 LEADIGITLIAVDE HHHHCCCCEEEEEC c2-4 boundary middle|DEXHc_RecQ3; middle|recQ_fam; 0.29 Bad: -23.891 cosmic_spacer
21 low complexity Q14191 693 ALPMVPIVALTA HCCCCCEEEEEC c2-rev boundary middle|DEXHc_RecQ3; middle|recQ_fam; 0.5 NA cosmic_phi_to_LIVMF
22 nes_ord Q14191 706 ASSSIREDIVRCLNLRN CCHHHHHHHHHHHCCCC c1c-4 ORD boundary|DEXHc_RecQ3; middle|recQ_fam; boundary|SF2_C_RecQ; 0.0 Bad: -24.124 cosmic_phi
23 nes_diso Q14191 776 MTQQVTGELRKLNLSC HHHHHHHHHHHCCCCC c1a-4 boundary middle|recQ_fam; middle|SF2_C_RecQ; 0.0 Weak: -31.199 Weak|
24 nes_beta_diso Q14191 811 VRDEIQCVIATIAFGM HHCCCCEEEEECCCCC c1a-4 boundary middle|recQ_fam; middle|SF2_C_RecQ; 0.71 NA cosmic_spacer
25 nes_diso Q14191 814 EIQCVIATIAFGMGINK CCCEEEEECCCCCCCCC c1c-5 boundary middle|recQ_fam; middle|SF2_C_RecQ; 0.5 NA cosmic_spacer
26 nes_diso Q14191 884 RNEKFRLYKLKMMA CCHHHHHHHHHHHH c2-4 boundary middle|recQ_fam; boundary|SF2_C_RecQ; 0.0 Weak: -30.136 cosmic_spacer Weak|
27 nes_diso Q14191 891 YKLKMMAKMEKYLHSSR HHHHHHHHHHHHHHCCC c1cR-4 boundary middle|recQ_fam; boundary|SF2_C_RecQ; 0.0 Medium: -34.95 Medium|
28 nes_diso Q14191 959 FGPQAFKLLSAVDILG CHHHHHHHHHHHHHHC c1a-AT-4 boundary middle|recQ_fam; boundary|RQC; 0.0 NA
29 nes_diso Q14191 960 GPQAFKLLSAVDILG HHHHHHHHHHHHHHC c1b-4 boundary middle|recQ_fam; boundary|RQC; 0.0 NA
30 nes_diso Q14191 965 KLLSAVDILGEKFGIGL HHHHHHHHHCCCCCCCH c1c-AT-5 boundary middle|recQ_fam; boundary|RQC; 0.0 NA
31 nes_diso Q14191 966 LLSAVDILGEKFGIGL HHHHHHHHCCCCCCCH c1d-5 boundary middle|recQ_fam; boundary|RQC; 0.0 NA
32 nes_diso Q14191 1018 FSRQLITEGFLVEV HHHHHHHCCCCEEE c2-AT-4 boundary boundary|recQ_fam; boundary|RQC; 0.0 NA
33 nes_diso Q14191 1174 PPAILATNKILVDM CCCHHCCHHHHHHH c2-AT-4 boundary boundary|HRDC; 0.0 NA cosmic_spacer
34 nes_diso Q14191 1211 MLAPLLEVIKHFCQ HHHHHHHHHHHHHH c3-4 boundary boundary|HRDC; 0.0 Bad: -22.378
35 nes_diso Q14191 1248 AKNKICTLSQSMAITY CCCCCCCCCHHHHHHH c1d-4 boundary boundary|HRDC; boundary|HTH_40; 0.0 Bad: -28.683
36 nes_diso Q14191 1277 AESRILPLMTIGMHLSQ HHHCCCCHHHHHHHHHH c1c-4 boundary boundary|HTH_40; 0.0 Bad: -25.983 cosmic_spacer
37 nes_diso Q14191 1278 ESRILPLMTIGMHL HHCCCCHHHHHHHH c2-4 boundary boundary|HTH_40; 0.0 Medium: -36.291 Medium|
38 nes_diso Q14191 1321 RNPPVNSDMSKISLIR HCCCCCCCCCCCHHHH c1a-4 boundary boundary|HTH_40; 0.0 Bad: -22.773 cosmic_spacer
39 nes_diso Q14191 1328 DMSKISLIRMLVPE CCCCCHHHHHHCCC c2-5 boundary boundary|HTH_40; 0.0 Bad: -26.859 cosmic_spacer
40 nes_diso Q14191 1339 VPENIDTYLIHMAIEI CCCCCCHHHHHHHHHH c1a-4 boundary boundary|HTH_40; 0.0 Weak: -32.261 cosmic_phi Weak|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.