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Q14203_DCTN1 | Dynactin subunit 1   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q14203 223 QVRDLEEKLETLRLKR HHHHHHHHHHHHHHHH c1a-5 DISO middle|DUF1633 superfamily; 0.0 Weak: -32.548 cosmic_phi Weak|
2 nes_diso Q14203 293 YMEEMADTADAIEMAT HHHHHHHHHHHHHHHH c1a-AT-5 DISO middle|DUF1633 superfamily; 0.0 NA
3 nes_diso Q14203 302 DAIEMATLDKEMAEER HHHHHHHHHHHHHHHH c1aR-4 DISO middle|DUF1633 superfamily; 0.0 Bad: -29.442 cosmic_spacer
4 nes_diso Q14203 324 EVEALKERVDELTT HHHHHHHHHHHHHH c3-4 DISO middle|DUF1633 superfamily; 0.0 Medium: -35.747 cosmic_phi_to_LIVMF Medium|
5 nes_diso Q14203 331 RVDELTTDLEILKA HHHHHHHHHHHHHH c3-4 DISO middle|DUF1633 superfamily; 0.0 Strong: -41.159 cosmic_spacer Strong|
6 nes_diso Q14203 436 AEEMVEMLTDRNLNLEE HHHHHHHHHHHHHHHHH c1c-AT-4 DISO boundary|DUF1633 superfamily; 0.0 NA
7 nes_diso Q14203 453 KVRELRETVGDLEA HHHHHHHHHHHHHH c3-4 DISO boundary|DUF1633 superfamily; 0.0 Medium: -35.117 cosmic_spacer Medium|
8 nes_diso Q14203 477 NARETELELREQLDMAG HHHHHHHHHHHHHHHHH c1c-AT-4 DISO boundary|DUF1633 superfamily; 0.0 NA cosmic_spacer
9 nes_diso Q14203 565 HAKAIEMELRQMEVAQ HHHHHHHHHHHHHHHH c1a-4 boundary middle|Dynactin; 0.0 Bad: -26.713
10 nes_diso Q14203 567 KAIEMELRQMEVAQ HHHHHHHHHHHHHH c2-4 boundary middle|Dynactin; 0.0 Medium: -35.247 Medium|
11 low complexity Q14203 605 CVLVLLLMPRLICKAE HHHHHHHCHHHHHHHH c1aR-4 boundary middle|Dynactin; 0.0 Bad: -27.265 cosmic_spacer
12 nes_diso Q14203 618 KAELIRKQAQEKFELSE HHHHHHHHHHHHCCCCC c1c-AT-4 boundary middle|Dynactin; 0.0 NA cosmic_spacer
13 nes_diso Q14203 638 ERPGLRGAAGEQLSFAA CCCCCCCCHHHHHHHHH c1c-AT-4 boundary middle|Dynactin; 0.0 NA cosmic_spacer
14 nes_diso Q14203 648 EQLSFAAGLVYSLSLLQ HHHHHHHHHHHHHHHHH c1c-4 boundary middle|Dynactin; 0.0 Medium: -35.234 cosmic_spacer Medium|
15 nes_ord Q14203 677 CSVDVYKKVGSLYPEMSA CCHHHHHHHHHHHHHHHH c4-4 ORD middle|Dynactin; 0.0 NA
16 nes_diso Q14203 748 DHIKFTQSALDCMSVEV HHHHHHHHHHHHHHHHH c1c-AT-4 boundary middle|Dynactin; 0.0 NA
17 nes_diso Q14203 749 HIKFTQSALDCMSVEV HHHHHHHHHHHHHHHH c1a-AT-5 boundary middle|Dynactin; 0.0 NA
18 nes_diso Q14203 756 ALDCMSVEVGRLRA HHHHHHHHHHHHHH c3-4 boundary middle|Dynactin; 0.0 Weak: -32.18 cosmic_spacer Weak|
19 nes_diso Q14203 833 HLTWVVAVLQEVAA HHHHHHHHHHHHHH c3-4 boundary boundary|Dynactin; 0.0 Medium: -36.832 cosmic_spacer Medium|
20 nes_diso Q14203 858 NEGLLVAALEELAFKA CCCCCHHHHHHHHHHH c1a-4 boundary 0.0 Medium: -37.846 Medium|
21 nes_diso Q14203 947 DRETVIKELKKSLKIKG HHHHHHHHHHHHHHHHH c1c-4 boundary middle|DUF460 superfamily; 0.0 Medium: -35.985 cosmic_spacer Medium|
22 nes_diso Q14203 969 ANVRLSLLEKKLDSAA HHHHHHHHHHHHHHHH c1aR-4 DISO middle|DUF460 superfamily; 0.0 Weak: -31.135 cosmic_spacer Weak|
23 nes_diso Q14203 1015 TMDALQADIDQLEA HHHHHHHHHHHHHH c3-4 DISO boundary|DUF460 superfamily; 0.0 Weak: -31.463 Weak|
24 nes_diso Q14203 1089 DSPLLLQQISAMRLHI CCHHHHHHHHHHHHHH c1a-4 DISO 0.0 Weak: -31.418 cosmic_phi_to_LIVMF Weak|
25 nes_diso Q14203 1096 QISAMRLHISQLQH HHHHHHHHHHHHHH c3-4 DISO 0.0 Bad: -27.047 cosmic_phi_to_LIVMF
26 nes_diso Q14203 1158 TLNQLSTHTHVVDITR HHHHHHCCCEEEECCC c1a-AT-5 boundary 0.29 NA cosmic_spacer
27 nes_diso Q14203 1191 QLKSLSDTVEKLKD HHHHHHHHHHHHHH c3-4 boundary 0.0 Bad: -29.182 cosmic_phi
28 nes_beta_diso Q14203 1239 QDDTVYMGKVTFSC CCCCEEEEEEEEEC c2-4 boundary 0.86 NA
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.