Q14980 | Nuclear mitotic apparatus protein 1

Q14980_NUMA1 | Nuclear mitotic apparatus protein 1 ProteinAtlas Cosmic Proviz Swissmodel

Cosmic Cancer Gene Census (CGC)

#	candidates	uniprotID	start#	sequence	secondary	class	loc_DISO	loc_CDD	beta	Ebind	Cosmic	TOTALscore(Ebind\|Stars)
1	nes_diso	Q14980	7	RGAALLSWVNSLHVAD	HHHHHHHHHHCCCCCC	c1a-4	boundary		0.0	Medium: -38.321	cosmic_spacer A9V;	Medium\|
2	nes_diso	Q14980	16	NSLHVADPVEAVLQLQD	HCCCCCCCHHHHHHHCC	c1c-4	boundary		0.0	Bad: -25.763
3	nes_diso	Q14980	49	GQQILKQPVSERLDFVC	CCHHHHCCHHHHHHHHH	c1c-4	boundary		0.0	Bad: -21.998	cosmic_phi F63S;
4	nes_diso	Q14980	89	EGSELELAKMTMLL	CCCHHHHHHHHHHH	c2-4	boundary		0.0	Weak: -30.39	cosmic_spacer E94K;A96V;	Weak\|
5	nes_diso	Q14980	91	SELELAKMTMLLLYHS	CHHHHHHHHHHHHHHH	c1aR-4	boundary		0.0	Medium: -38.595	cosmic_spacer E94K;A96V;H105N;	Medium\|
6	nes_diso	Q14980	115	DWEQFEYKIQAELAVIL	CHHHCCHHHHHHHHHHH	c1c-4	boundary		0.0	Bad: -28.153	cosmic_phi F119L;I123N;
7	nes_diso	Q14980	119	FEYKIQAELAVILKFVL	CCHHHHHHHHHHHHHHH	c1c-4	boundary		0.0	Bad: -28.636	cosmic_phi I123N;
8	nes_diso	Q14980	171	PSHQAKREIRFLELQK	CCCCCCCEEEEEEEEE	c1a-AT-4	DISO		0.57	NA	cosmic_spacer R177T;
9	nes_diso	Q14980	212	PQFQMRRLKKQLADER	CHHHHHHHHHHHHHHH	c1aR-4	DISO		0.0	Bad: -22.95
10	nes_diso	Q14980	250	QIAMMQQRIDRLALLN	HHHHHHHHHHHHHHHH	c1a-5	DISO		0.0	Medium: -37.664	cosmic_spacer R257H;R260H;	Medium\|
11	nes_diso	Q14980	323	LSFKLREFASHLQQLQ	HHHHHHHHHHHHHHHH	c1aR-5	DISO		0.0	Bad: -28.558	cosmic_spacer R328Q;
12	nes_diso	Q14980	326	KLREFASHLQQLQD	HHHHHHHHHHHHHH	c3-4	DISO		0.0	Bad: -28.608	cosmic_spacer R328Q;
13	nes_diso	Q14980	333	HLQQLQDALNELTE	HHHHHHHHHHHHHH	c3-4	DISO		0.0	Bad: -29.449	cosmic_spacer E343G;
14	nes_diso	Q14980	386	KLSQLEEHLSQLQD	HHHHHHHHHHHCCC	c3-4	DISO	boundary\|Surf_Exclu_PgrA superfamily;	0.0	Bad: -29.504
15	nes_diso	Q14980	467	LITDLQSSISNLSQ	HHHHHHHHHHHHHH	c3-4	DISO	middle\|Surf_Exclu_PgrA superfamily;	0.0	Bad: -29.052	cosmic_spacer S474C;
16	nes_diso	Q14980	499	QVASLTSELTTLNA	HHHHHHHHHHHHHH	c3-4	DISO	boundary\|Surf_Exclu_PgrA superfamily;	0.0	Weak: -31.989		Weak\|
17	nes_diso	Q14980	613	KAAKLEILQQQLQVAN	HHHHHHHHHHHHHHHH	c1d-4	DISO	middle\|DUF1633 superfamily; middle\|SMC_prok_B;	0.0	Medium: -34.653		Medium\|
18	nes_diso	Q14980	665	EQHEAQAQVAELELQL	HHHHHHHHHHHHHHHH	c1a-AT-4	DISO	middle\|DUF1633 superfamily; middle\|SMC_prok_B;	0.0	NA
19	nes_diso	Q14980	700	LQEQLQALKESLKVTK	HHHHHHHHHHHHHHHH	c1d-4	DISO	middle\|DUF1633 superfamily; middle\|SMC_prok_B;	0.0	Bad: -27.139	cosmic_spacer Q701K;
20	nes_diso	Q14980	1018	ADLALEKAARAELEMRL	HHHHHHHHHHHHHHHHH	c1c-AT-4	DISO	middle\|SMC_prok_B; boundary\|SMC_prok_B;	0.0	NA	cosmic_spacer A1025V;
21	nes_diso	Q14980	1041	QRVEFATLQEALAHAL	HHHHHHHHHHHHHHHH	c1aR-4	DISO	middle\|SMC_prok_B; middle\|SMC_prok_B;	0.0	Medium: -33.954		Medium\|
22	nes_diso	Q14980	1079	ELEELRQTVKQLKE	HHHHHHHHHHHHHH	c3-4	DISO	middle\|SMC_prok_B; middle\|SMC_prok_B;	0.0	Bad: -29.356
23	nes_diso	Q14980	1121	KLEALRAEVSKLEQ	HHHHHHHHHHHHHH	c3-4	DISO	middle\|SMC_prok_B; middle\|SMC_prok_B;	0.0	Weak: -30.045		Weak\|
24	nes_diso	Q14980	1222	RKNSLISSLEEEVSILN	HHHHHHHHHHHHHHHHH	c1c-4	DISO	middle\|SMC_prok_B; middle\|SMC_prok_B;	0.0	Weak: -31.523	cosmic_phi L1226P;I1227M;	Weak\|
25	nes_diso	Q14980	1226	LISSLEEEVSILNR	HHHHHHHHHHHHHH	c3-4	DISO	middle\|SMC_prok_B; middle\|SMC_prok_B;	0.0	Weak: -31.217	cosmic_phi_to_LIVMF I1227M;	Weak\|
26	nes_diso	Q14980	1456	ERANLGRQFLEVELDQ	HHHHHHHHHHHHHHHH	c1a-4	DISO	middle\|SMC_prok_B;	0.0	Medium: -35.692	cosmic_spacer R1462W;E1468A;	Medium\|
27	nes_diso	Q14980	1529	ERQKLTAQVEQLEVFQ	HHHHHHHHHHHHHHHH	c1a-4	DISO	middle\|SMC_prok_B;	0.0	Medium: -36.049	cosmic_phi Q1536H;V1542G;	Medium\|
28	nes_diso	Q14980	1690	ADQQLRDLGKFQVAT	HHHHHHHHCCCCCCC	c1b-4	DISO	middle\|SMC_prok_B;	0.0	Bad: -24.572
29	nes_diso	Q14980	1714	AKPQLDLSIDSLDLSC	CCCCCCCCCCCCCCCC	c1a-4	DISO	boundary\|SMC_prok_B;	0.0	Bad: -27.798	cosmic_spacer D1719G;D1723H;
30	nes_diso	Q14980	1716	PQLDLSIDSLDLSC	CCCCCCCCCCCCCC	c2-4	DISO	boundary\|SMC_prok_B;	0.0	Bad: -29.713	cosmic_spacer D1719G;D1723H;
31	nes_diso	Q14980	1763	LPPKVESLESLYFTP	CCCCCCCCCCCCCCC	c1b-4	DISO	boundary\|SMC_prok_B;	0.0	Strong: -42.104	cosmic_spacer K1766T;	Strong\|
32	nes_diso	Q14980	1786	LESSLDSLGDVFLDS	CCCCCCCCCCCCCCC	c1b-4	DISO		0.0	Bad: -26.196	cosmic_phi F1797L;L1798P;
33	nes_diso	Q14980	1811	TTQIINITMTKKLDVEE	CCCEECCCCCCCCCCCC	c1c-4	DISO		0.12	Medium: -35.783		Medium\|

candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
sequence: Hydrophobic positions are colored in red.
class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
loc_DISO: location of the segment with respect to the ordered/disordered regions
loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
beta: beta-strand content in the middle of the segment
Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.