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Q15303_ERBB4 | Receptor tyrosine-protein kinase erbB-4   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q15303 54 ENCEVVMGNLEITS CCCCEEECCEEEEE c2-4 boundary boundary|Recep_L_domain; 0.57 NA cosmic_phi
2 nes_beta_diso Q15303 76 FLRSVREVTGYVLVAL HHCCEEEECCEEEEEC c1a-AT-5 DISO middle|Recep_L_domain; 0.71 NA cosmic_spacer
3 nes_beta_diso Q15303 76 FLRSVREVTGYVLVAL HHCCEEEECCEEEEEC c1d-5 DISO middle|Recep_L_domain; 0.71 NA cosmic_phi_to_LIVMF
4 nes_diso Q15303 93 QFRYLPLENLRIIR CCCCCCCCCCEEEE c2-5 boundary middle|Recep_L_domain; 0.0 Medium: -37.985 cosmic_phi Medium|
5 nes_diso Q15303 125 KDGNFGLQELGLKN CCCCCCCEEECCCC c2-4 boundary middle|Recep_L_domain; 0.43 NA cosmic_phi_to_LIVMF
6 nes_diso Q15303 132 QELGLKNLTEILNGGV EEECCCCCCCHHCCCC c1aR-4 boundary boundary|Recep_L_domain; 0.0 Medium: -34.147 cosmic_spacer Medium|
7 nes_diso Q15303 135 GLKNLTEILNGGVYVDQ CCCCCCCHHCCCCEECC c1c-5 boundary boundary|Recep_L_domain; 0.0 Medium: -36.197 cosmic_spacer Medium|
8 nes_diso Q15303 390 NVFRTVREITGFLNIQS HHCCCCEEEECEEEEEC c1c-AT-5 boundary middle|Recep_L_domain; 0.62 NA cosmic_spacer
9 nes_beta_diso Q15303 391 VFRTVREITGFLNIQS HCCCCEEEECEEEEEC c1a-AT-5 boundary middle|Recep_L_domain; 0.71 NA cosmic_spacer
10 nes_beta_diso Q15303 391 VFRTVREITGFLNIQS HCCCCEEEECEEEEEC c1d-5 boundary middle|Recep_L_domain; 0.71 NA cosmic_phi_to_LIVMF
11 nes_diso Q15303 410 NMTDFSVFSNLVTIGG CCCCCCHHCCCEEEEC c1d-5 __ middle|Recep_L_domain; 0.0 Weak: -31.165 cosmic_phi_to_LIVMF Weak|
12 nes_diso Q15303 424 GGRVLYSGLSLLILKQ ECEECCCCCEEEEEEC c1a-4 boundary middle|Recep_L_domain; 0.29 Weak: -31.088 cosmic_spacer Weak|
13 nes_ord Q15303 449 SLKEISAGNIYITD CCCEECCCCEEEEC c2-AT-5 ORD boundary|Recep_L_domain; 0.43 NA cosmic_spacer
14 nes_ord Q15303 473 NWTTLFSTINQRIVIRD CHHHCCCCCCCEEEEEC c1c-4 ORD boundary|Recep_L_domain; boundary|GF_recep_IV; boundary|FU; 0.12 Bad: -27.157 cosmic_phi_to_LIVMF
15 nes_TM Q15303 649 RTPLIAAGVIGGLFILV CCCHHHCCCCCHHHHHH c1c-4 __ boundary|GF_recep_IV; small|TM_ErbB4; 0.0 Bad: -26.544 cosmic_phi
16 nes_TM Q15303 653 IAAGVIGGLFILVIVGL HHCCCCCHHHHHHHHHH c1c-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 Medium: -39.857 cosmic_phi
17 nes_TM Q15303 653 IAAGVIGGLFILVIVG HHCCCCCHHHHHHHHH c1a-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 Strong: -40.962 cosmic_phi
18 nes_TM Q15303 654 AAGVIGGLFILVIVGL HCCCCCHHHHHHHHHH c1a-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 Weak: -31.823 cosmic_phi
19 low complexity Q15303 657 VIGGLFILVIVGLTFAV CCCHHHHHHHHHHHHHH c1c-5 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 NA cosmic_phi
20 nes_TM Q15303 658 IGGLFILVIVGLTFAV CCHHHHHHHHHHHHHH c1a-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 NA cosmic_phi_to_LIVMF
21 low complexity Q15303 658 IGGLFILVIVGLTF CCHHHHHHHHHHHH c2-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 NA cosmic_phi_to_LIVMF
22 low complexity Q15303 659 GGLFILVIVGLTFAVYV CHHHHHHHHHHHHHHHH c1c-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 NA cosmic_phi
23 low complexity Q15303 660 GLFILVIVGLTFAVYV HHHHHHHHHHHHHHHH c1aR-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 NA cosmic_phi_to_LIVMF
24 low complexity Q15303 660 GLFILVIVGLTFAV HHHHHHHHHHHHHH c2-5 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 NA cosmic_phi
25 low complexity Q15303 661 LFILVIVGLTFAVYVRR HHHHHHHHHHHHHHHHH c1c-5 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 Strong: -41.041 cosmic_phi
26 nes_TM Q15303 662 FILVIVGLTFAVYVRR HHHHHHHHHHHHHHHH c1aR-4 boundary boundary|GF_recep_IV; small|TM_ErbB4; 0.0 Weak: -32.86 cosmic_phi
27 nes_diso Q15303 712 ILKETELKRVKVLG EECHHHHCEEEEEE c2-AT-5 boundary boundary|PTKc_HER4; boundary|Pkinase_Tyr; 0.29 NA cosmic_spacer
28 nes_diso Q15303 759 PKANVEFMDEALIMAS CHHHHHHHHHHHHHHH c1d-4 boundary middle|PTKc_HER4; middle|Pkinase_Tyr; 0.0 Medium: -35.266 cosmic_phi Medium|
29 nes_beta_diso Q15303 777 HPHLVRLLGVCLSP CCCCCEEEEEECCC c2-4 boundary middle|PTKc_HER4; middle|Pkinase_Tyr; 0.71 NA cosmic_spacer
30 nes_ord Q15303 840 VHRDLAARNVLVKS HHHHHHHCEEEECC c2-AT-4 ORD middle|PTKc_HER4; middle|Pkinase_Tyr; 0.29 NA cosmic_spacer
31 nes_ord Q15303 853 SPNHVKITDFGLAR CCCEEEECCCCHHH c2-4 ORD middle|PTKc_HER4; middle|Pkinase_Tyr; 0.57 NA cosmic_phi
32 nes_diso Q15303 943 PICTIDVYMVMVKC CCCCHHHHHHHHHH c2-5 boundary middle|PTKc_HER4; boundary|Pkinase_Tyr; 0.0 Medium: -33.537 cosmic_phi_to_LIVMF Medium|
33 nes_diso Q15303 943 PICTIDVYMVMVKC CCCCHHHHHHHHHH c3-4 boundary middle|PTKc_HER4; boundary|Pkinase_Tyr; 0.0 Medium: -36.34 cosmic_phi Medium|
34 nes_diso Q15303 947 IDVYMVMVKCWMIDAD HHHHHHHHHHHCCCCH c1aR-4 boundary middle|PTKc_HER4; boundary|Pkinase_Tyr; 0.0 Weak: -32.711 cosmic_phi_to_LIVMF Weak|
35 nes_diso Q15303 966 KFKELAAEFSRMAR CHHHHHHHHHHHHH c3-4 boundary middle|PTKc_HER4; boundary|Pkinase_Tyr; 0.0 Bad: -29.424 cosmic_spacer
36 nes_diso Q15303 1205 EPLYLNTFANTLGKAE CCCCCCCCCCCCCCHH c1aR-4 DISO 0.0 Bad: -22.259 cosmic_phi_to_LIVMF
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.