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Q15911_ZFHX3 | Zinc finger homeobox protein 3   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q15911 186 CAAPVYPQIINTFHIAS CCCCCCCCEEEEEEEEC c1c-4 boundary 0.5 Bad: -24.804 cosmic_phi_to_LIVMF
2 nes_diso Q15911 196 NTFHIASSFGKWFEGPD EEEEEECCCCCCCCCCC c1cR-4 boundary 0.25 Bad: -21.76 cosmic_phi
3 nes_diso Q15911 220 ALAGLSPVLHSFRVFD CCCCCCCCCEEEEEEE c1a-5 DISO 0.29 Weak: -32.425 cosmic_spacer Weak|
4 nes_beta_diso Q15911 223 GLSPVLHSFRVFDVRH CCCCCCEEEEEEEEEC c1a-5 DISO 0.71 NA cosmic_phi_to_LIVMF
5 nes_diso Q15911 262 NNVDLSKFDGFVLYGK CCCCCHHCCCCCCCCC c1aR-4 DISO 0.0 Bad: -24.786 cosmic_phi_to_LIVMF
6 nes_diso Q15911 277 KRKPILMCFLCKLSFGY CCCCEEEHHHHHHCCCC c1c-4 DISO 0.38 NA cosmic_spacer
7 nes_diso Q15911 278 RKPILMCFLCKLSFGY CCCEEEHHHHHHCCCC c1a-4 DISO 0.29 Bad: -28.501 cosmic_phi_to_LIVMF
8 nes_diso Q15911 287 CKLSFGYVRSFVTHAV HHHCCCCHHHHHHHHH c1aR-4 DISO 0.0 Bad: -26.708 cosmic_phi_to_LIVMF
9 nes_diso Q15911 360 PGHSFYGKFSGIRMEG CCCCCCCCCCEEEECC c1a-4 DISO 0.14 Medium: -34.997 cosmic_spacer Medium|
10 nes_diso Q15911 399 TLLNLGGLTSSVLKTP HHHHCCCCCCCCCCCC c1aR-4 DISO 0.0 Medium: -35.19 cosmic_spacer Medium|
11 nes_diso Q15911 409 SVLKTPITSVPLGP CCCCCCCCCCCCCC c2-AT-5 DISO 0.0 NA cosmic_spacer
12 nes_diso Q15911 831 NMMLLQQNMTQIQH HHHHCHHHHHHHHH c3-4 DISO 0.0 Weak: -30.246 Weak|
13 nes_diso Q15911 882 SDAQFMMSGFQLDP CCHHHHHCCCCCCC c2-4 DISO 0.0 Bad: -27.994 cosmic_phi_to_LIVMF
14 nes_diso Q15911 954 TTDNLDMLGLHMNV ECCCHHHHHHHHHH c2-4 DISO 0.0 Strong: -41.955 cosmic_phi_to_LIVMF Strong|
15 nes_diso Q15911 956 DNLDMLGLHMNVERSL CCHHHHHHHHHHCCCC c1aR-4 DISO 0.0 Medium: -33.525 cosmic_phi_to_LIVMF Medium|
16 nes_diso Q15911 1229 KYSNADVNRLRVHA CCCCCCHHHCCHHC c2-AT-4 DISO 0.0 NA cosmic_spacer
17 nes_diso Q15911 1257 CQDMLNNKIHLQLHLTH CCHHHCCCHHHHHHHHH c1c-4 DISO 0.0 Medium: -35.527 cosmic_phi Medium|
18 nes_diso Q15911 1274 LHSVAPDCVEKLIMTV CCCCCHHHHHHHCCEE c1a-AT-4 DISO 0.0 NA cosmic_spacer
19 nes_diso Q15911 1404 NQCSLAFKTIEKLQLHS CCCCCEECCHHHHHHHH c1c-AT-4 DISO 0.25 NA cosmic_spacer
20 nes_diso Q15911 1405 QCSLAFKTIEKLQLHS CCCCEECCHHHHHHHH c1a-AT-4 DISO 0.29 NA cosmic_spacer
21 nes_diso Q15911 1406 CSLAFKTIEKLQLHS CCCEECCHHHHHHHH c1b-4 DISO 0.14 NA cosmic_phi_to_LIVMF
22 nes_diso Q15911 1444 LKKHLETSHLELSE HHHHHHHHCCCCCH c2-AT-4 DISO 0.0 NA cosmic_spacer
23 nes_diso Q15911 1679 LLSQVPTESVGMPP CCCCCCHHHCCCCC c2-AT-5 DISO 0.0 NA
24 nes_diso Q15911 1776 LLPHFPMTTETLLQLQQ CCCCCCCCHHHHHHHHH c1c-AT-5 DISO 0.0 NA cosmic_spacer
25 nes_diso Q15911 1827 TGPGLLEDLKAQVQVPQ CCCCHHHHHHHHHHCHH c1c-4 DISO 0.0 Bad: -29.855 cosmic_spacer_Pro
26 nes_diso Q15911 1944 ATKALLENFGFELVIQY HHHHHHHHHCHHHHHHH c1c-4 DISO 0.0 Medium: -38.669 cosmic_spacer Medium|
27 nes_diso Q15911 2079 AQPSVPLTQLSMPM CCCCCCCCCCCCCC c2-4 DISO 0.0 Medium: -39.712 cosmic_phi Medium|
28 low complexity Q15911 2093 ELPIFSPLMMQT CCCCCCCCCCCC c2-rev DISO 0.0 Bad: -29.011 cosmic_phi_to_LIVMF
29 nes_diso Q15911 2120 PVEPLPADLAQLYQ CCCCCCHHHHHHHH c3-4 DISO boundary|HOX; 0.0 Bad: -22.102 cosmic_spacer
30 nes_diso Q15911 2153 TDDQLRVLRQYFDINN CHHHHHHHHHHHCCCC c1d-4 DISO boundary|HOX; 0.0 Bad: -29.1 cosmic_spacer
31 nes_diso Q15911 2212 SNPPITSLEELKIDS CCCCCCCHHHHCCCC c1b-4 DISO boundary|HOX; boundary|Homeobox; 0.0 Strong: -42.131 cosmic_spacer Strong|
32 nes_diso Q15911 2268 KDDEFEQLSNLLNLPT CHHHHHHHHHHHCCCC c1d-4 DISO boundary|Homeobox; 0.0 Bad: -20.128 cosmic_spacer
33 nes_diso Q15911 2275 LSNLLNLPTRVIVVWF HHHHHCCCCCEEECCC c1a-AT-4 DISO boundary|Homeobox; 0.14 NA cosmic_spacer
34 nes_diso Q15911 2333 CSLVFQRIFDLIKHQK CCCHHHHHHHHHHHHH c1aR-4 DISO boundary|Homeobox; 0.0 Medium: -33.774 cosmic_spacer Medium|
35 nes_diso Q15911 2666 PTRKMLDHIAHEVGLKK CCHHHHHHHHHHHCCCH c1c-4 DISO middle|COG5576; boundary|Homeobox; 0.0 Bad: -24.31 cosmic_spacer
36 nes_diso Q15911 2741 AGYNLTLSAMLLDC HCCCCCCHHHHHCC c2-4 DISO boundary|COG5576; 0.0 Weak: -31.867 cosmic_phi_to_LIVMF Weak|
37 nes_diso Q15911 2781 QGVPLSPVSKTMELSP CCCCCCCCCCCCCCCC c1d-4 DISO 0.0 Bad: -23.754 cosmic_phi_to_LIVMF
38 nes_diso Q15911 2945 GQKRFRTQMTNLQLKV CCCCCCCCCCHHHHHH c1a-4 boundary boundary|Homeobox; 0.0 Medium: -36.036 cosmic_phi Medium|
39 nes_diso Q15911 2954 TNLQLKVLKSCFNDYR CHHHHHHHHHHHHHCC c1aR-4 boundary boundary|Homeobox; 0.0 Bad: -23.963 cosmic_phi
40 nes_diso Q15911 3100 MFDNTPLQALNLPT CCCCCHHHHHCCCC c2-AT-5 DISO 0.0 NA
41 nes_diso Q15911 3476 DEEAARSHLKSLCFFG CHHHHHHHHHHHCCCC c1a-AT-4 DISO 0.0 NA cosmic_spacer
42 nes_diso Q15911 3486 SLCFFGQSVVNLQE HHCCCCCCCCCCCC c3-4 DISO 0.0 Bad: -27.907 cosmic_spacer
43 nes_diso Q15911 3491 GQSVVNLQEMVLHV CCCCCCCCCCCEEC c2-4 DISO 0.0 Medium: -39.222 cosmic_spacer Medium|
44 nes_diso Q15911 3493 SVVNLQEMVLHVPTGG CCCCCCCCCEECCCCC c1aR-4 DISO 0.29 Bad: -26.879 cosmic_spacer
45 nes_diso Q15911 3493 SVVNLQEMVLHVPT CCCCCCCCCEECCC c3-4 DISO 0.14 Bad: -25.671 cosmic_spacer
46 nes_diso Q15911 3692 GLTSVGTDTFRLXX CCCCCEEECCCC c2-AT-5-Ct DISO 0.5 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.