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Q5VU43_MYOME | Myomegalin   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q5VU43 22 LKLRIYFLEERMQQKY HHHHHHHHHHHHHHHC c1aR-4 DISO boundary|SMC_prok_B; 0.0 Weak: -30.269 cosmic_phi Weak|
2 nes_diso Q5VU43 97 ETEHVYELLENKIQLLQ HHHHHHHHHHHHHHHHH c1c-4 DISO middle|SMC_prok_B; 0.0 Bad: -24.318
3 nes_diso Q5VU43 331 GTSPAQQQVALLDLQS CCCHHHHHHHHHHHHH c1a-AT-4 DISO middle|SMC_prok_B; boundary|TMPIT superfamily; 0.0 NA cosmic_spacer
4 nes_diso Q5VU43 337 QQVALLDLQSALFCSQ HHHHHHHHHHHHHHHH c1aR-4 DISO middle|SMC_prok_B; boundary|TMPIT superfamily; 0.0 Weak: -31.627 cosmic_spacer Weak|
5 nes_diso Q5VU43 351 SQLEIQKLQRVVRQKE HHHHHHHHHHHHHHHH c1aR-4 DISO middle|SMC_prok_B; boundary|TMPIT superfamily; 0.0 Bad: -28.183 cosmic_phi
6 nes_diso Q5VU43 463 SDKTLEANEMLLEK CCCCHHHHHHHHHH c2-AT-4 DISO middle|SMC_prok_B; middle|SMC_prok_B; 0.0 NA cosmic_spacer
7 nes_diso Q5VU43 470 NEMLLEKLRQRIHDKA HHHHHHHHHHHHHHHH c1aR-4 DISO middle|SMC_prok_B; middle|SMC_prok_B; 0.0 Bad: -25.592 cosmic_spacer
8 nes_diso Q5VU43 537 MESLLRAKGLEVEQ HHHHHHHHCHHHHH c2-AT-4 DISO middle|SMC_prok_B; middle|SMC_prok_B; 0.0 NA cosmic_spacer
9 nes_diso Q5VU43 641 HEMEIQGLLQSVSTRE HHHHHHHHHHHHHHHH c1aR-4 DISO middle|SMC_prok_B; middle|SMC_prok_B; 0.0 Medium: -34.489 cosmic_spacer Medium|
10 nes_diso Q5VU43 772 SQMELSALQSMMAVQE HHHHHHHHHHHHHHHH c1aR-4 DISO middle|SMC_prok_B; 0.0 Medium: -33.967 cosmic_spacer Medium|
11 nes_diso Q5VU43 793 QAADMESLTRNIQIKE HHHHHHHHHHHHHHHH c1a-AT-4 DISO middle|SMC_prok_B; 0.0 NA cosmic_spacer
12 nes_diso Q5VU43 793 QAADMESLTRNIQIKE HHHHHHHHHHHHHHHH c1d-4 DISO middle|SMC_prok_B; 0.0 NA cosmic_spacer
13 nes_diso Q5VU43 802 RNIQIKEDLIKDLQMQL HHHHHHHHHHHHHHHHH c1c-4 DISO middle|SMC_prok_B; 0.0 Bad: -20.574 cosmic_spacer
14 nes_diso Q5VU43 826 AMERLTQEVLLLRE HHHHHHHHHHHHHH c3-4 DISO middle|SMC_prok_B; 0.0 Bad: -25.553 cosmic_spacer
15 nes_diso Q5VU43 833 EVLLLREKVASVES HHHHHHHHHHCCCC c3-4 DISO middle|SMC_prok_B; 0.0 Weak: -32.271 cosmic_spacer Weak|
16 nes_diso Q5VU43 1041 SVSHIRNTMLSLCLEN HHHHHHHHHHHHHHHH c1a-5 DISO middle|SMC_prok_B; 0.0 Weak: -32.944 cosmic_phi_to_LIVMF Weak|
17 nes_diso Q5VU43 1111 NAHNIINLLKEQLVLSS HHHHHHHHHHHHCCCCC c1c-4 DISO boundary|SMC_prok_B; 0.0 Weak: -30.82 Weak|
18 nes_diso Q5VU43 1138 LLVHLTSTIERINT HHHHHHHHHHHHHH c3-4 DISO boundary|SMC_prok_B; 0.0 Bad: -24.804
19 nes_diso Q5VU43 1350 NILVLRKDIKDLKA CHHHHHHHHHHHHH c3-4 DISO 0.0 Medium: -33.448 Medium|
20 nes_diso Q5VU43 1371 VIQNLKSRVRSLSVTS HHHHHHHHHCCCCCCC c1a-5 DISO 0.0 Medium: -34.491 cosmic_spacer Medium|
21 nes_diso Q5VU43 1437 DLESLIQRVSQLEA CHHHHHHHHHHHHH c3-4 DISO 0.0 Strong: -42.848 cosmic_phi_to_LIVMF Strong|
22 nes_diso Q5VU43 1850 EIRNLRQRLEESICIND HHHHHHHHHHHHHHHHH c1c-5 DISO 0.0 Medium: -34.461 cosmic_phi_to_LIVMF Medium|
23 nes_diso Q5VU43 2001 EKQQLFESLQSELQIYE HHHHHHHHHHHHHHHHH c1c-4 DISO boundary|HAUS5 superfamily; 0.0 Bad: -26.956 cosmic_spacer
24 nes_diso Q5VU43 2043 DLSHLVAEVRALRG CCHHHHHHHHHHHH c3-4 DISO 0.0 Weak: -32.861 cosmic_spacer Weak|
25 nes_diso Q5VU43 2108 QDSAVSPPVRDVGMNS CCCCCCCCHHHHCCCC c1a-4 DISO 0.0 Medium: -33.887 cosmic_spacer Medium|
26 nes_diso Q5VU43 2138 SETPIINRANGLGLDT CCCCCCCCCCCCCCCC c1a-AT-4 DISO 0.0 NA cosmic_spacer
27 nes_diso Q5VU43 2197 GKLLVKKIVSLVRSAC HHHHHHHHHHHHHHHC c1aR-4 boundary 0.0 Weak: -32.197 cosmic_spacer Weak|
28 nes_diso Q5VU43 2240 LHHALEESASLLTMFW HHHHHHHHHHHHHHHH c1a-AT-4 DISO 0.0 NA cosmic_spacer
29 nes_diso Q5VU43 2320 RTHDVLKKARTNLEVKS HHHHHHHHHHCCCCCCC c1c-AT-4 DISO 0.0 NA
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.