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Q6W2J9_BCOR | BCL-6 corepressor   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q6W2J9 60 TAHRIDGLAALSMDR HCEECCHHHHCCCCC c1b-4 DISO 0.0 Weak: -32.85 cosmic_spacer Weak|
2 nes_diso Q6W2J9 101 GREAATSTLGGLGFSS CCHHCCCCCCCCCCCC c1a-AT-4 DISO 0.0 NA cosmic_spacer
3 nes_diso Q6W2J9 463 PTVLVHSRAGSGLVLSG CCCCCCCCCCCCCCCCC c1c-AT-4 DISO 0.0 NA cosmic_spacer
4 nes_diso Q6W2J9 718 DALGLGMVHPMLIPHT CCCCCCCCCCCCCCCC c1aR-4 DISO 0.0 Weak: -30.136 cosmic_phi_to_LIVMF Weak|
5 nes_diso Q6W2J9 851 DFIALREELGRISD CHHHHHHHHCCCCC c3-4 DISO 0.0 Weak: -32.691 cosmic_phi Weak|
6 nes_diso Q6W2J9 1017 ERAMMRFSELEMKE HHHHCCHHHHHHHH c2-4 DISO 0.0 Medium: -33.163 cosmic_spacer Medium|
7 nes_diso Q6W2J9 1187 HYSELTNLKVCIELTG CCCCCHHHCCCHHHHC c1d-4 DISO boundary|BCOR; 0.0 Bad: -26.951 cosmic_spacer
8 nes_diso Q6W2J9 1445 QSRPMPPEARRLIVNK CCCCCCCCHHCHHCCC c1a-AT-4 boundary boundary|BCOR; boundary|Ank_2; 0.0 NA cosmic_spacer
9 nes_diso Q6W2J9 1476 EEVVLYCLENKICDVN HHHHHHHHHCCCCCCC c1aR-5 boundary boundary|Ank_2; 0.0 Bad: -28.573 cosmic_phi_to_LIVMF
10 nes_diso Q6W2J9 1479 VLYCLENKICDVNH HHHHHHCCCCCCCC c3-4 boundary boundary|Ank_2; 0.0 Bad: -26.494 cosmic_spacer
11 nes_ord Q6W2J9 1539 ENDHLEIVRLLLSY HCCHHHHHHHHHHC c2-4 ORD boundary|Ank_2; 0.0 Bad: -23.183 cosmic_phi_to_LIVMF
12 nes_diso Q6W2J9 1628 DDDDAYSDVFEFEFSE CCCCHHCCEEEEEEEC c1a-AT-4 boundary boundary|PUFD; 0.43 NA cosmic_spacer
13 nes_diso Q6W2J9 1661 RNWLLLSDVLKKLKMSS CCEEEHHHHHHHHCCCH c1c-4 boundary middle|PUFD; 0.12 Bad: -28.683 cosmic_spacer
14 nes_diso Q6W2J9 1662 NWLLLSDVLKKLKMSS CEEEHHHHHHHHCCCH c1aR-4 boundary middle|PUFD; 0.0 Medium: -39.279 cosmic_spacer Medium|
15 nes_diso Q6W2J9 1662 NWLLLSDVLKKLKMSS CEEEHHHHHHHHCCCH c1a-4 boundary middle|PUFD; 0.0 Medium: -35.623 cosmic_spacer Medium|
16 nes_diso Q6W2J9 1683 NFPNVEIVTIAE CCCCCCEEEEEH c2-rev DISO middle|PUFD; 0.5 Bad: -22.116 cosmic_phi_to_LIVMF
17 nes_diso Q6W2J9 1693 AEAEFYRQVSASLLFSC EHHHHHHHHHHHHHHCC c1c-4 boundary middle|PUFD; 0.0 Bad: -20.603 cosmic_phi
18 nes_diso Q6W2J9 1722 ELLDLVEFTNEIQTLL CCEEEEEECHHHHHHH c1aR-5 boundary boundary|PUFD; 0.57 NA cosmic_spacer
19 nes_diso Q6W2J9 1725 DLVEFTNEIQTLLG EEEEECHHHHHHHC c3-4 boundary boundary|PUFD; 0.29 Medium: -35.547 cosmic_spacer Medium|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.