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Q7Z407_CSMD3 | CUB and sushi domain-containing protein 3   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_beta_diso Q7Z407 26 KCGRLDFILMKKMGIKS ECCCCCEEEEEEEECCC c1c-4 boundary 0.75 NA cosmic_phi_to_LIVMF
2 nes_beta_diso Q7Z407 29 RLDFILMKKMGIKS CCCEEEEEEEECCC c2-5 boundary 1.0 NA cosmic_phi_to_LIVMF
3 nes_TM Q7Z407 42 SGFTFWNLVFLLTVSC CCEEEECCCCEEECCC c1a-4 boundary boundary|CUB; 0.43 Medium: -35.337 cosmic_phi_to_LIVMF
4 nes_TM Q7Z407 51 FLLTVSCVKGFIYTCG CEEECCCCCCEEEECC c1aR-4 boundary boundary|CUB; 0.14 Bad: -26.099 cosmic_spacer
5 nes_beta_diso Q7Z407 99 ERNRIQIVFQSFALEE CCCEEEEEEEECCCCC c1a-4 boundary middle|CUB; 1.0 NA cosmic_phi_to_LIVMF
6 nes_beta_diso Q7Z407 101 NRIQIVFQSFALEE CEEEEEEEECCCCC c2-4 boundary middle|CUB; 0.86 NA cosmic_phi_to_LIVMF
7 nes_beta_diso Q7Z407 127 HPTNFRTRLTGFHLPP CCCCEEEEEECCCCCC c1a-4 boundary middle|CUB; 0.86 NA cosmic_phi
8 nes_beta_diso Q7Z407 147 TKSVFSLRLTSDFAVSA CCCEEEEEEEEEEEECC c1c-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 1.0 NA cosmic_phi_to_LIVMF
9 nes_diso Q7Z407 155 LTSDFAVSAHGFKVYY EEEEEEECCCCEEECC c1a-AT-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.43 NA cosmic_spacer
10 nes_beta_diso Q7Z407 275 PGDTISLIFTDFQMEE CCCEEEEEEEEEEECC c1a-4 boundary boundary|CUB; 1.0 NA cosmic_phi_to_LIVMF
11 nes_beta_diso Q7Z407 277 DTISLIFTDFQMEE CEEEEEEEEEEECC c2-4 boundary boundary|CUB; 1.0 NA cosmic_spacer
12 nes_diso Q7Z407 301 EPPTIWLSGMNIPP CCCEEEECCCCCCC c2-4 boundary middle|CUB; 0.57 Bad: -24.29 cosmic_spacer
13 nes_diso Q7Z407 374 PADVTVSSVTAVTIHR CCCCCCCCCCEEEEEC c1a-AT-4 boundary boundary|CUB; 0.14 NA cosmic_spacer
14 nes_diso Q7Z407 375 ADVTVSSVTAVTIHR CCCCCCCCCEEEEEC c1b-4 boundary boundary|CUB; 0.29 NA cosmic_spacer
15 nes_diso Q7Z407 440 ELAVVTHRVKKAIDFKS EEEEEEEECCCEEEEEC c1c-5 boundary 0.62 NA cosmic_phi_to_LIVMF
16 nes_diso Q7Z407 583 TNKVIQINFEEFDLEI CCEEEEECCCCCCCCC c1a-4 boundary middle|CUB; 0.43 NA cosmic_spacer
17 nes_diso Q7Z407 585 KVIQINFEEFDLEI EEEEECCCCCCCCC c2-5 boundary middle|CUB; 0.29 Medium: -34.6 cosmic_spacer Medium|
18 nes_diso Q7Z407 587 IQINFEEFDLEIGYDT EEECCCCCCCCCCCCE c1aR-4 boundary middle|CUB; 0.0 Bad: -24.92 cosmic_spacer
19 nes_diso Q7Z407 629 LIVSMSSQMWLHLQTDE EEEEECCCCEEEEECCC c1cR-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.5 NA cosmic_phi
20 nes_diso Q7Z407 639 LHLQTDESVGSVGFKV EEEECCCEEECCCCCC c1a-AT-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.43 NA cosmic_spacer
21 nes_beta_diso Q7Z407 681 SNRDVLRFECQFGFEL CCCCEEEEEECCCEEE c1d-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; boundary|CCP; 0.86 NA cosmic_spacer
22 nes_diso Q7Z407 684 DVLRFECQFGFELIGEK CEEEEEECCCEEEECCC c1cR-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; boundary|CCP; boundary|CCP; boundary|CUB; 0.62 Strong: -41.158 cosmic_spacer Strong|
23 nes_diso Q7Z407 714 IPICIFPCLSNFTAPMGT CCEEEECCCCCCCCCCCC c4-4 boundary boundary|CCP; boundary|CCP; boundary|CUB; 0.12 Bad: -28.646 cosmic_phi_to_LIVMF
24 nes_diso Q7Z407 721 CLSNFTAPMGTVLS CCCCCCCCCCCCCC c3-4 boundary boundary|CCP; boundary|CCP; boundary|CUB; 0.0 Bad: -20.095 cosmic_phi_to_LIVMF
25 nes_beta_diso Q7Z407 755 PGSRIHLSFNDFDLES CCCEEEEEECCCCCCC c1a-4 boundary middle|CUB; 0.71 NA cosmic_phi
26 nes_diso Q7Z407 757 SRIHLSFNDFDLES CEEEEEECCCCCCC c2-4 boundary middle|CUB; 0.57 NA cosmic_phi
27 nes_diso Q7Z407 764 NDFDLESQFDFLAVKD CCCCCCCCCCEEEEEE c1a-4 boundary middle|CUB; 0.14 Strong: -42.09 cosmic_phi Strong|
28 nes_diso Q7Z407 933 IKITFERFQTELNYDV EEEEEECEECCCCCCE c1aR-4 boundary middle|CUB; 0.57 Bad: -25.766 cosmic_phi_to_LIVMF
29 nes_beta_diso Q7Z407 1101 HGKGVQFNFHTFHLED CCCEEEEEECCCCEEE c1a-4 boundary middle|CUB; 0.71 NA cosmic_phi_to_LIVMF
30 nes_diso Q7Z407 1103 KGVQFNFHTFHLED CEEEEEECCCCEEE c2-4 boundary middle|CUB; 0.57 NA cosmic_phi_to_LIVMF
31 nes_diso Q7Z407 1145 INAGLYGNFRAQLRFIS CCCCCCCCCEEEEEEEC c1c-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.38 NA cosmic_spacer
32 nes_beta_diso Q7Z407 1151 GNFRAQLRFISDFSISY CCCEEEEEEECCCCEEE c1c-AT-4 __ boundary|CUB; boundary|CCP; boundary|CCP; 0.75 NA cosmic_spacer
33 nes_diso Q7Z407 1153 FRAQLRFISDFSISY CEEEEEEECCCCEEE c1b-4 __ boundary|CUB; boundary|CCP; boundary|CCP; 0.57 NA cosmic_phi_to_LIVMF
34 nes_diso Q7Z407 1192 SRIGFNFGIGDTLTFSC EEECCCCCCCCEEEEEE c1c-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.12 Bad: -20.795 cosmic_phi_to_LIVMF
35 nes_diso Q7Z407 1267 CIYSIQVQAGKGINISA EECCEEEECCCEEEEEE c1c-AT-5 boundary boundary|CCP; boundary|CCP; middle|CUB; 0.62 NA cosmic_spacer
36 nes_beta_diso Q7Z407 1275 AGKGINISARTFHLAQ CCCEEEEEECCEECCC c1a-AT-4 boundary middle|CUB; 0.71 NA cosmic_spacer
37 nes_diso Q7Z407 1307 LGAFTGASMRGLTLSS CCCEECCCCCCCEEEE c1a-AT-4 DISO middle|CUB; 0.14 NA cosmic_spacer
38 nes_diso Q7Z407 1338 TDEGFQLVYTSFELSH CCCCCCCCCCEEEEEE c1d-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.14 Weak: -31.245 cosmic_spacer Weak|
39 nes_beta_diso Q7Z407 1449 PGNIVSLQFLAFDT CCCEEEEEECCEEC c2-4 boundary middle|CUB; 0.86 NA cosmic_phi_to_LIVMF
40 nes_diso Q7Z407 1478 NDMLLKEISGSLIPEG CCCCCCCCCCCCCCCC c1aR-4 DISO middle|CUB; 0.0 Bad: -20.143 cosmic_spacer
41 nes_diso Q7Z407 1486 SGSLIPEGIHSTLNIVT CCCCCCCCEEECCCEEE c1c-4 DISO boundary|CUB; 0.38 NA cosmic_spacer
42 nes_diso Q7Z407 1490 IPEGIHSTLNIVTIQF CCCCEEECCCEEEEEE c1a-4 DISO boundary|CUB; 0.57 NA cosmic_phi_to_LIVMF
43 nes_diso Q7Z407 1494 IHSTLNIVTIQFDT EEECCCEEEEEECC c2-4 DISO boundary|CUB; boundary|Sushi; boundary|CCP; 0.57 NA cosmic_spacer
44 nes_diso Q7Z407 1497 TLNIVTIQFDTDFYISK CCCEEEEEECCCEEEEC c1c-5 DISO boundary|CUB; boundary|Sushi; boundary|CCP; 0.62 NA cosmic_phi_to_LIVMF
45 nes_diso Q7Z407 1614 CDWTITVNADYVISLAF EECCEEECCCCEEEEEE c1c-AT-4 boundary boundary|Sushi; boundary|CCP; middle|CUB; 0.5 NA cosmic_spacer
46 nes_beta_diso Q7Z407 1622 ADYVISLAFISFSIEP CCCEEEEEEEEEECCC c1a-4 boundary middle|CUB; 1.0 NA cosmic_phi_to_LIVMF
47 nes_beta_diso Q7Z407 1622 ADYVISLAFISFSI CCCEEEEEEEEEEC c2-4 boundary middle|CUB; 1.0 NA cosmic_phi
48 nes_beta_diso Q7Z407 1624 YVISLAFISFSIEPNY CEEEEEEEEEECCCCC c1aR-4 boundary middle|CUB; 1.0 NA cosmic_phi_to_LIVMF
49 nes_beta_diso Q7Z407 1624 YVISLAFISFSIEP CEEEEEEEEEECCC c2-5 boundary middle|CUB; 1.0 NA cosmic_phi_to_LIVMF
50 nes_diso Q7Z407 1711 TRLGMDYKLGSTVTYYC EEECCCCCCCCEEEEEE c1cR-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.12 Weak: -30.434 cosmic_phi Weak|
51 nes_beta_diso Q7Z407 1795 PKEFVVFGQFVFFQ CCCEEEECEEEEEE c2-4 boundary middle|CUB; 0.86 NA cosmic_phi_to_LIVMF
52 nes_diso Q7Z407 1803 QFVFFQTSLHDVVEVYD EEEEEECCCCCEEEEEC c1c-5 boundary middle|CUB; 0.38 Bad: -29.705 cosmic_spacer
53 nes_diso Q7Z407 1803 QFVFFQTSLHDVVE EEEEEECCCCCEEE c3-4 boundary middle|CUB; 0.43 Bad: -25.344 cosmic_spacer
54 nes_diso Q7Z407 1851 RFTSVGPITAKGFHFVY EEEEECCEEEECCCEEE c1c-AT-5 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.62 NA cosmic_spacer
55 nes_diso Q7Z407 1882 PEPRFGRRIGNEFAVGS CCCCCCEEECCCCCCCC c1c-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.38 Bad: -20.639 cosmic_spacer
56 nes_diso Q7Z407 1967 WKITVPEGAGIQVQVVS EEEECCCCCEEEEEEEE c1c-AT-4 boundary boundary|CCP; boundary|CCP; middle|CUB; 0.38 NA cosmic_spacer
57 nes_beta_diso Q7Z407 1973 EGAGIQVQVVSFAT CCCEEEEEEEEEEC c2-4 boundary middle|CUB; 1.0 NA cosmic_spacer
58 nes_diso Q7Z407 2013 TIPHLLNSTSNNLYLNF CCCEEEEEECCCEEEEE c1c-AT-5 boundary boundary|CUB; 0.62 NA cosmic_spacer
59 nes_beta_diso Q7Z407 2021 TSNNLYLNFQSDISVSA ECCCEEEEECCEEEEEC c1c-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.75 NA cosmic_phi_to_LIVMF
60 nes_diso Q7Z407 2029 FQSDISVSAAGFHLEY ECCEEEEECCCCCCCC c1a-AT-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.57 NA cosmic_spacer
61 nes_diso Q7Z407 2110 QCGGAMSDFSGVILSP ECCCCCCCCCCEEECC c1a-AT-4 boundary boundary|CCP; boundary|CCP; boundary|CUB; 0.0 NA cosmic_spacer
62 nes_diso Q7Z407 2111 CGGAMSDFSGVILSP CCCCCCCCCCEEECC c1b-4 boundary boundary|CCP; boundary|CCP; boundary|CUB; 0.14 NA cosmic_spacer
63 nes_diso Q7Z407 2137 CTWTINLPIGFGVHLQF EEEEECCCCCCEEEEEE c1c-4 boundary boundary|CCP; boundary|CCP; middle|CUB; 0.25 Bad: -28.055 cosmic_phi_to_LIVMF
64 nes_diso Q7Z407 2139 WTINLPIGFGVHLQFVN EEECCCCCCEEEEEEEE c1c-4 boundary boundary|CCP; boundary|CCP; middle|CUB; 0.38 NA cosmic_phi_to_LIVMF
65 nes_beta_diso Q7Z407 2143 LPIGFGVHLQFVNFST CCCCCEEEEEEEECCC c1a-4 boundary boundary|CCP; boundary|CCP; middle|CUB; 0.86 NA cosmic_phi_to_LIVMF
66 nes_beta_diso Q7Z407 2145 IGFGVHLQFVNFST CCCEEEEEEEECCC c2-4 boundary middle|CUB; 1.0 NA cosmic_phi_to_LIVMF
67 nes_diso Q7Z407 2373 FHSDFTTSGFFVLS EEEEEECCCCEECC c2-AT-4 DISO boundary|CUB; boundary|CCP; boundary|CCP; 0.43 NA cosmic_spacer
68 nes_diso Q7Z407 2381 GFFVLSYHAYQLRVCQ CCEECCCCEEECEECC c1a-AT-5 __ boundary|CUB; boundary|CCP; boundary|CCP; 0.43 NA cosmic_spacer
69 nes_diso Q7Z407 2431 GNAILTCRLGERLQMDG CCCEEEEEECCCEEECC c1c-4 boundary boundary|CCP; boundary|CCP; boundary|CUB; 0.62 NA cosmic_phi
70 nes_diso Q7Z407 2450 PVCQVLCPANELRLDS CEEEEECCCCCCCCCC c1a-AT-5 boundary boundary|CCP; boundary|CCP; boundary|CUB; 0.29 NA cosmic_spacer
71 nes_diso Q7Z407 2501 EFFQTEKEFDVLQVYD EEECCCCCCCEEEECC c1a-AT-5 boundary middle|CUB; 0.14 NA cosmic_spacer
72 nes_diso Q7Z407 2556 NKKGFRIRYIAFYC CCCCCCCEEEEEEC c2-4 boundary boundary|CUB; boundary|CCP; boundary|CCP; 0.43 NA cosmic_phi_to_LIVMF
73 nes_diso Q7Z407 2689 CVVVTCPSINSFILEH EEECCCCCCCCCCCCC c1a-AT-5 __ boundary|CCP; boundary|CCP; 0.0 NA cosmic_spacer
74 nes_diso Q7Z407 2779 STAIFTCDLGFMLVGS CEEEEEECCCEEEECC c1a-4 boundary boundary|CCP; boundary|CCP; boundary|CCP; 0.57 Bad: -29.244 cosmic_phi_to_LIVMF
75 nes_diso Q7Z407 2785 CDLGFMLVGSAVRECL ECCCEEEECCCEEEEE c1aR-4 boundary boundary|CCP; boundary|CCP; boundary|CCP; 0.57 Bad: -27.794 cosmic_phi_to_LIVMF
76 nes_diso Q7Z407 2843 CNPGFRLIGSSVRICQ ECCCEEEECCCEEEEC c1d-4 boundary boundary|CCP; boundary|CCP; boundary|CCP; 0.57 Bad: -28.936 cosmic_phi_to_LIVMF
77 nes_diso Q7Z407 2895 DVVTFSCNIGYLMQ CEEEEEECCCEEEE c3-4 boundary boundary|CCP; boundary|CCP; boundary|CCP; 0.57 Bad: -26.537 cosmic_phi_to_LIVMF
78 nes_diso Q7Z407 3311 SEVSFSCNFPFILVGSS CEEEEEECCCEEEECCC c1cR-4 boundary boundary|CCP; boundary|CCP; boundary|CCP; 0.62 Weak: -31.313 cosmic_phi_to_LIVMF Weak|
79 nes_diso Q7Z407 3363 QNNTFGFQVGSVVQFHC ECCCCCCCCCCEEEEEE c1c-4 boundary boundary|CCP; boundary|CCP; 0.12 Bad: -23.015 cosmic_phi_to_LIVMF
80 nes_ord Q7Z407 3414 PETPAHANVVGMDLPS CCCCCCCEEECCCCCC c1a-AT-4 ORD boundary|CCP; boundary|CCP; boundary|CCP; 0.43 NA cosmic_spacer
81 nes_beta_diso Q7Z407 3548 QEARLMLRIYLIKVPA CCCEEEEEEEEECCCC c1a-4 DISO 1.0 NA cosmic_phi
82 nes_beta_diso Q7Z407 3550 ARLMLRIYLIKVPA CEEEEEEEEECCCC c2-4 DISO 1.0 NA cosmic_phi
83 nes_diso Q7Z407 3600 DYGQFGLQRLGLNM CCCCCCCEECCCCC c2-4 DISO 0.29 Weak: -32.098 cosmic_spacer Weak|
84 nes_diso Q7Z407 3602 GQFGLQRLGLNMSEGS CCCCCEECCCCCCCCC c1aR-4 DISO 0.29 Weak: -31.285 cosmic_spacer Weak|
85 nes_TM Q7Z407 3636 LVPFFALIFAGFGFYL CCCCCCCCCCCCCCCC c1a-5 DISO 0.0 Weak: -31.637 cosmic_phi
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.