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Q86UW6_N4BP2 | NEDD4-binding protein 2   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q86UW6 50 LFTSISEIFSDLDPDVVY HHHHHHHHHHCCCHHHEE c4-5 boundary small|CUE_N4BP2; 0.0 Medium: -35.391 cosmic_spacer Medium|
2 nes_diso Q86UW6 50 LFTSISEIFSDLDP HHHHHHHHHHCCCH c3-4 boundary small|CUE_N4BP2; 0.0 Weak: -32.49 cosmic_spacer Weak|
3 nes_diso Q86UW6 57 IFSDLDPDVVYLMLSE HHHCCCHHHEEEEEEC c1a-5 boundary small|CUE_N4BP2; 0.29 Medium: -34.814 cosmic_spacer Medium|
4 nes_diso Q86UW6 73 CDFKVENAMDCLLELSA CCCHHHHHHHHHHHHHC c1c-4 boundary 0.0 Medium: -34.44 cosmic_phi_to_LIVMF Medium|
5 nes_diso Q86UW6 126 EDSKMDSFLDMQLTE CCCCCCCCCCCHHHH c1b-4 DISO 0.0 Medium: -35.106 Medium|
6 nes_diso Q86UW6 134 LDMQLTEDLDSLIQNAF CCCHHHHHHHHHHHHHH c1cR-4 DISO 0.0 Medium: -36.658 cosmic_phi Medium|
7 nes_diso Q86UW6 187 MTPIFSTQNMNLNG CCCCCCCCCCCCCC c2-AT-4 DISO 0.0 NA
8 nes_diso Q86UW6 308 DQKSTRVSDVFLPS CCCCCCCCCCCCCC c2-AT-4 DISO 0.0 NA cosmic_spacer
9 nes_diso Q86UW6 427 VSQVVRKKTSYVGLVL HHHHHHHHCCCCCCEE c1a-AT-4 boundary boundary|AAA_33; 0.0 NA cosmic_spacer
10 nes_diso Q86UW6 434 KTSYVGLVLVLLRG HCCCCCCEEEEEEC c2-4 boundary boundary|AAA_33; 0.43 NA cosmic_spacer
11 low complexity Q86UW6 437 YVGLVLVLLRGLPG CCCCEEEEEECCCC c3-4 boundary boundary|AAA_33; 0.86 NA cosmic_phi_to_LIVMF
12 nes_ord Q86UW6 464 NPSGVILSTDDYFYING CCCCEEEECHHHEEECC c1c-AT-4 ORD boundary|AAA_33; 0.5 NA cosmic_spacer
13 nes_diso Q86UW6 583 MSSSVPEKIERIELCA CCCCCCCCCCCCCCCC c1a-4 DISO boundary|AAA_33; 0.0 Bad: -27.171
14 nes_diso Q86UW6 619 EENILSLSLKHLEFTE HHHHCCCCCCCHHHCC c1a-4 DISO 0.0 Medium: -33.77 Medium|
15 nes_diso Q86UW6 621 NILSLSLKHLEFTE HHCCCCCCCHHHCC c2-5 DISO 0.0 Medium: -36.659 Medium|
16 nes_diso Q86UW6 664 EISDMNPSIQSALILET HHCCCCCCHHHCHHCCC c1c-5 DISO 0.0 Medium: -35.985 cosmic_spacer Medium|
17 nes_diso Q86UW6 910 LEIGTNDKMNEISLST CCCCCCCCCCCCCCCC c1a-AT-4 DISO 0.0 NA
18 nes_diso Q86UW6 1038 SIKVLTGRLDGFKPKVFN CEEEEEECCCCCCCCCCC c4-5 boundary 0.25 Bad: -29.608 cosmic_spacer
19 nes_diso Q86UW6 1038 SIKVLTGRLDGFKP CEEEEEECCCCCCC c3-4 boundary 0.57 Weak: -30.494 cosmic_spacer Weak|
20 nes_diso Q86UW6 1045 RLDGFKPKVFNINT CCCCCCCCCCCCCC c3-4 boundary 0.0 Bad: -29.395 cosmic_spacer
21 nes_diso Q86UW6 1091 NLNILCKLFGSFSLEA HHHHHHHHHCCCCHHH c1a-5 boundary 0.0 Medium: -39.602 cosmic_phi Medium|
22 nes_diso Q86UW6 1115 NKDIIWATSLLLDS CCCHHHHHHCCCCC c2-AT-4 boundary 0.0 NA cosmic_spacer
23 nes_diso Q86UW6 1146 DGSQIGPFSLGLNLKE CCCCCCCCCCCCCCEE c1d-4 DISO 0.0 Bad: -25.327 cosmic_spacer
24 nes_diso Q86UW6 1151 GPFSLGLNLKEIISQRG CCCCCCCCCEEECCCCC c1cR-4 DISO 0.38 Bad: -28.147
25 nes_diso Q86UW6 1172 SNSPVPEFSHGIGISN CCCCCCCCCCCCCCCC c1d-4 DISO 0.0 Medium: -33.69 Medium|
26 nes_diso Q86UW6 1286 DIFNFVSSTSNLELNE CCCCCCCCCCCCCCCC c1a-AT-5 DISO 0.0 NA
27 nes_diso Q86UW6 1367 MAKSLTIDCLELAL HHCCCCCCEEEECC c2-4 boundary 0.29 Medium: -36.918 Medium|
28 nes_diso Q86UW6 1369 KSLTIDCLELALPPEL CCCCCCEEEECCCHHH c1aR-4 __ 0.57 Bad: -26.178
29 nes_diso Q86UW6 1384 LAFQLNELFGPVGIDS HHHHHHHHHCCCCCCC c1aR-4 boundary 0.0 Medium: -33.174 cosmic_spacer Medium|
30 nes_diso Q86UW6 1400 GSLTVEDCVVHIDLNL CCCCCCCEEEECCHHH c1a-4 boundary 0.57 Bad: -27.767 cosmic_phi_to_LIVMF
31 nes_diso Q86UW6 1407 CVVHIDLNLAKVIH EEEECCHHHHHHHH c3-4 boundary 0.14 Weak: -32.573 cosmic_phi_to_LIVMF Weak|
32 nes_diso Q86UW6 1489 KKVSLREIMSEEIALQE CCCCHHHHHHHHHHHHH c1c-4 DISO 0.0 Bad: -24.879 cosmic_spacer
33 nes_diso Q86UW6 1528 QLFKIFPAINQNFLVDI HHHHHCCCCCHHHHHHH c1c-5 boundary 0.0 Bad: -27.446
34 nes_diso Q86UW6 1687 PQNVLDLHGLHVDE CCCEEECCCCCHHH c2-4 boundary boundary|DUF1771; boundary|SMR; 0.43 Bad: -25.344 cosmic_spacer
35 nes_diso Q86UW6 1694 HGLHVDEALEHLMRVLE CCCCHHHHHHHHHHHHH c1c-4 boundary boundary|DUF1771; boundary|SMR; 0.0 Strong: -42.413 cosmic_spacer Strong|
36 nes_diso Q86UW6 1743 KPAVIKYLISHSFRFSE HHHHHHHHHHCCCCEEC c1c-4 boundary boundary|SMR; 0.0 Bad: -19.486
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.