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Q8N653_LZTR1 | Leucine-zipper-like transcriptional regulator 1   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_ord Q8N653 87 NGKTMLNDLLRFDVKD CCCCCCCCEEEEECCC c1a-4 ORD middle|PLN02153; 0.43 NA cosmic_spacer
2 nes_diso Q8N653 247 SGAKITNNLFQFEFKD CCCCCCCCEEEEECCC c1a-4 boundary boundary|PLN02153; middle|PLN02153; 0.43 Medium: -35.106 cosmic_phi_to_LIVMF Medium|
3 nes_beta_diso Q8N653 288 TMVAFDRHLYVFGG EEEEECCEEEEEEC c3-4 boundary middle|PLN02153; 0.71 NA cosmic_phi_to_LIVMF
4 nes_beta_diso Q8N653 388 RLFHAAAVISDAMYIFG CCCCEEEEECCEEEEEE c1c-AT-5 boundary boundary|PLN02153; boundary|BTB1_POZ_LZTR1; 0.75 NA cosmic_spacer
5 nes_diso Q8N653 500 AAGGARPPLLHVAIRE CCCCCCCCCEEEEECC c1a-AT-4 boundary middle|BTB1_POZ_LZTR1; 0.29 NA
6 nes_diso Q8N653 537 RKGHVEDVLLIMDVYK CCCCHHHHHHHHHHHH c1a-4 boundary boundary|BTB1_POZ_LZTR1; 0.0 Weak: -30.248 Weak|
7 nes_diso Q8N653 542 EDVLLIMDVYKLALSF HHHHHHHHHHHHHHHC c1a-4 boundary boundary|BTB1_POZ_LZTR1; boundary|BACK1_LZTR1; 0.0 Medium: -35.291 Medium|
8 nes_diso Q8N653 544 VLLIMDVYKLALSF HHHHHHHHHHHHHC c2-5 boundary boundary|BTB1_POZ_LZTR1; boundary|BACK1_LZTR1; 0.0 Weak: -32.01 Weak|
9 nes_diso Q8N653 546 LIMDVYKLALSFQLCR HHHHHHHHHHHCCHHH c1aR-4 boundary boundary|BTB1_POZ_LZTR1; boundary|BACK1_LZTR1; 0.0 Medium: -36.304 cosmic_spacer Medium|
10 nes_ord Q8N653 570 IEASVDLQNVLVVC HHHHCCHHHHHHHH c2-4 ORD boundary|BTB1_POZ_LZTR1; boundary|BACK1_LZTR1; 0.0 NA cosmic_phi_to_LIVMF
11 nes_ord Q8N653 578 NVLVVCESAARLQLSQ HHHHHHHHHHHHCHHH c1a-AT-5 ORD boundary|BTB1_POZ_LZTR1; boundary|BACK1_LZTR1; 0.0 NA cosmic_spacer
12 nes_diso Q8N653 609 NQVIMMKEFERLSSPLIV HHHHCCHHHHHCCHHHHH c4-4 boundary boundary|BTB1_POZ_LZTR1; boundary|BACK1_LZTR1; boundary|BTB2_POZ_LZTR1; 0.0 Medium: -34.3 cosmic_phi Medium|
13 nes_diso Q8N653 658 YLEGAGAEFCDITLLL HHHCCCCCCCCEEEEE c1a-AT-5 boundary boundary|BACK1_LZTR1; boundary|BTB2_POZ_LZTR1; boundary|BTB; 0.0 NA cosmic_spacer
14 nes_ord Q8N653 762 QNLEMNVTVQNVLQILE HHHHHCCCHHHHHHHHH c1c-4 ORD boundary|BTB2_POZ_LZTR1; boundary|BTB; boundary|BACK2_LZTR1; 0.0 NA cosmic_phi_to_LIVMF
15 nes_diso Q8N653 792 CLHIIVHQFTKVSK HHHHHHHCHHHHHC c3-4 boundary boundary|BTB2_POZ_LZTR1; middle|BACK2_LZTR1; 0.0 Weak: -31.782 cosmic_spacer Weak|
16 nes_diso Q8N653 804 SKLPTLRSLSQQLLLDI HCCHHHHHCCHHHHHHH c1c-AT-4 boundary boundary|BTB2_POZ_LZTR1; boundary|BACK2_LZTR1; 0.0 NA cosmic_spacer
17 nes_diso Q8N653 805 KLPTLRSLSQQLLLDI CCHHHHHCCHHHHHHH c1d-5 boundary boundary|BTB2_POZ_LZTR1; boundary|BACK2_LZTR1; 0.0 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.