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Q8NFU7_TET1 | Methylcytosine dioxygenase TET1   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q8NFU7 161 QDTQVLPDIETLIGVQN CCCCCCCCHHHCCCCCC c1c-4 DISO 0.0 Medium: -38.248 Medium|
2 nes_diso Q8NFU7 269 QLEELGSRVESLKLSD HHHHCCCCCCCCCCCC c1a-5 DISO 0.0 Medium: -37.287 cosmic_phi_to_LIVMF Medium|
3 nes_diso Q8NFU7 320 STSPTSVIKFLLAG CCCCHHHHHHHHCC c2-AT-4 DISO 0.0 NA cosmic_spacer
4 nes_diso Q8NFU7 417 ETLGMSGSVVPDLPVFL HHHCCCCCCCCCCCCCC c1cR-5 DISO 0.0 Bad: -22.094
5 nes_diso Q8NFU7 553 TVHVVNTTVVTMPVPMVS CCCCCCCCCCCCCCCCCC c4-5 DISO 0.0 Bad: -17.004
6 nes_diso Q8NFU7 749 PKLFVQTVRNGIKHVH CHHHHHHHHCCCCCCC c1aR-5 DISO 0.0 Bad: -23.169 cosmic_spacer
7 nes_diso Q8NFU7 752 FVQTVRNGIKHVHC HHHHHHCCCCCCCC c3-4 DISO 0.0 Medium: -33.897 cosmic_spacer Medium|
8 nes_diso Q8NFU7 768 AETNVSFKKFNIEE CCCCCCCCCCCHHH c2-4 DISO 0.0 Bad: -20.833 cosmic_spacer
9 nes_diso Q8NFU7 775 KKFNIEEFGKTLENNS CCCCHHHHHHHCCCCC c1aR-4 DISO 0.0 Bad: -24.374 cosmic_spacer
10 nes_diso Q8NFU7 1077 VATQLTQLASIIKINY HHHHHHHHHHHHHHCC c1a-AT-4 DISO 0.0 NA cosmic_spacer
11 nes_diso Q8NFU7 1077 VATQLTQLASIIKINY HHHHHHHHHHHHHHCC c1d-4 DISO 0.0 NA cosmic_spacer
12 nes_diso Q8NFU7 1231 QPKTVFPPLTQIKLQR CCCCCCCCHHHHHHHC c1a-4 DISO 0.0 Weak: -31.937 cosmic_spacer Weak|
13 nes_diso Q8NFU7 1235 VFPPLTQIKLQR CCCCHHHHHHHC c2-rev DISO 0.0 Medium: -37.386 cosmic_phi Medium|
14 nes_diso Q8NFU7 1253 EKVKVEPLDSLSLFH HHHCCCCCCCCCCCC c1b-4 DISO 0.0 Weak: -30.088 cosmic_phi_to_LIVMF Weak|
15 nes_diso Q8NFU7 1256 KVEPLDSLSLFHLKT CCCCCCCCCCCCCCC c1b-5 DISO 0.0 Bad: -25.28 cosmic_phi_to_LIVMF
16 nes_diso Q8NFU7 1317 DQIRFQQVVKEQLMHQR HHHHHHHHHHHHHHHCC c1cR-4 DISO 0.0 Bad: -26.732 cosmic_spacer
17 nes_diso Q8NFU7 1347 PESALTLRNVNVVC CCHHHCHHHCEEEE c2-4 DISO 0.0 Weak: -32.851 Weak|
18 nes_diso Q8NFU7 1399 AMNFFTNPTKNLVSITK HHHHCCCCHHHHCCCCC c1c-AT-5 DISO 0.0 NA cosmic_spacer
19 nes_beta_diso Q8NFU7 1508 HHCPTAVMVVLIMVWD CCCCCCEEEEEEEHHC c1a-AT-4 boundary 0.71 NA cosmic_spacer
20 low complexity Q8NFU7 1510 CPTAVMVVLIMVWD CCCCEEEEEEEHHC c2-4 boundary 0.86 NA cosmic_spacer
21 low complexity Q8NFU7 1514 VMVVLIMVWDGIPLPM EEEEEEEHHCCCCHHH c1aR-4 boundary 0.43 NA cosmic_spacer
22 nes_beta_diso Q8NFU7 1654 EGRPFSGVTACLDFCA CCCCCCEEEEEEEHHC c1a-AT-4 boundary middle|Tet_JBP; 0.71 NA cosmic_spacer
23 nes_beta_diso Q8NFU7 1654 EGRPFSGVTACLDFCA CCCCCCEEEEEEEHHC c1d-4 boundary middle|Tet_JBP; 0.71 NA cosmic_phi_to_LIVMF
24 nes_diso Q8NFU7 1998 EHIFLDANIGGVAIAP CCCCCCCCCCCCCCCC c1a-4 DISO 0.0 Weak: -32.102 cosmic_spacer Weak|
25 nes_diso Q8NFU7 2057 PQHGFELNKIKFEA CCHHHHHHHHHHHH c2-4 DISO 0.0 Bad: -20.608 cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.