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Q93063_EXT2 | Exostosin-2   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_TM Q93063 16 PRMKTKHRIYYITLFS HHHCHHHHHHHHHHHH c1a-AT-4 DISO 0.0 NA cosmic_spacer
2 nes_TM Q93063 23 RIYYITLFSIVLLG HHHHHHHHHHHHHH c2-5 DISO 0.0 Bad: -25.85 cosmic_phi_to_LIVMF
3 low complexity Q93063 26 YITLFSIVLLGLIA HHHHHHHHHHHHHH c2-5 DISO 0.0 Medium: -36.391 cosmic_phi_to_LIVMF
4 low complexity Q93063 26 YITLFSIVLLGLIA HHHHHHHHHHHHHH c3-4 DISO 0.0 Medium: -33.967 cosmic_phi_to_LIVMF
5 nes_TM Q93063 31 SIVLLGLIATGMFQFW HHHHHHHHHCCCCCCC c1aR-5 DISO 0.0 Medium: -33.301
6 nes_TM Q93063 34 LLGLIATGMFQFWP HHHHHHCCCCCCCC c3-4 DISO 0.0 Weak: -30.273
7 nes_diso Q93063 79 ERGDLSCRMHTCFDVYR CCCCCCCCCHHCCEEHH c1c-4 boundary boundary|Exostosin; 0.0 Medium: -35.038 cosmic_spacer Medium|
8 nes_diso Q93063 107 YIYALKKYVDDFGVSV EECCCCCCCCCCCCCC c1a-5 boundary boundary|Exostosin; 0.0 Bad: -27.313 cosmic_spacer
9 nes_diso Q93063 228 VSIPVYSPLSAEVDLPE EECCCCCCCCCCCCCCC c1c-4 boundary middle|Exostosin; 0.0 Bad: -26.333 cosmic_phi_to_LIVMF
10 nes_diso Q93063 307 DYPQVLQEATFCVVLRG CHHHHHHHCCEEEECCC c1c-AT-4 boundary middle|Exostosin; 0.25 NA cosmic_spacer
11 nes_diso Q93063 308 YPQVLQEATFCVVLRG HHHHHHHCCEEEECCC c1a-AT-4 boundary middle|Exostosin; 0.29 NA cosmic_spacer
12 nes_ord Q93063 331 LSDVLQAGCVPVVI HHHHHHCCCEEEEE c2-AT-4 ORD middle|Exostosin; 0.14 NA cosmic_spacer
13 nes_ord Q93063 369 KMSDVYSILQSIPQ HHHHHHHHHHCCCH c3-4 ORD boundary|Exostosin; 0.0 NA cosmic_spacer
14 nes_ord Q93063 396 WEAYFQSIKAIALAT HHHHHCCCHHHHHHH c1b-4 ORD boundary|Exostosin; 0.0 NA
15 nes_ord Q93063 402 SIKAIALATLQIIN CCHHHHHHHHHHHH c2-5 ORD boundary|Exostosin; 0.0 NA
16 nes_diso Q93063 458 AIVLTYDRVESLFRVIT EEEEECCCHHHHHHHHH c1c-AT-5 boundary boundary|Glyco_transf_64; 0.12 NA
17 nes_diso Q93063 465 RVESLFRVITEVSK CHHHHHHHHHHHHC c3-4 boundary boundary|Glyco_transf_64; 0.0 Bad: -21.796 cosmic_spacer
18 nes_diso Q93063 468 SLFRVITEVSKVPS HHHHHHHHHHCCCC c3-4 boundary boundary|Glyco_transf_64; 0.0 Weak: -31.105 cosmic_spacer Weak|
19 nes_diso Q93063 478 KVPSLSKLLVVW CCCCCCEEEEEE c2-rev boundary middle|Glyco_transf_64; 0.5 NA cosmic_spacer
20 nes_ord Q93063 533 AVLAIDDDIIMLTS EEEEECCCEEECCH c3-4 ORD middle|Glyco_transf_64; 0.57 Weak: -31.093
21 nes_ord Q93063 547 DELQFGYEVWREFPDRL HHHHHHHHHHHHCCCCC c1cR-4 ORD middle|Glyco_transf_64; 0.0 NA cosmic_spacer
22 nes_diso Q93063 627 EDIAMNFLVANVTGKA HHHHHHHHHHHHHCCC c1aR-4 boundary middle|Glyco_transf_64; 0.0 Medium: -36.939 cosmic_spacer Medium|
23 nes_diso Q93063 654 CPECTAIDGLSLDQ CCCCCCCCCCCCCC c2-AT-4 boundary middle|Glyco_transf_64; 0.0 NA
24 nes_diso Q93063 676 CINKFASVFGTMPLKVVE HHHHHHHHHCCCCCCEEE c4-5 DISO boundary|Glyco_transf_64; 0.0 Medium: -34.023 cosmic_spacer Medium|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.