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Q96T58_MINT | Msx2-interacting protein   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_beta_diso Q96T58 43 SEGGVAAFVDFVDIKS CCCCEEEEEEEEEHHH c1a-4 boundary middle|RRM1_SHARP; boundary|RRM; 1.0 NA cosmic_spacer
2 nes_diso Q96T58 83 TIPSAARGLDDTVSIAS CCCCCCCCCCCCCCHHH c1c-AT-5 boundary boundary|RRM1_SHARP; boundary|RRM; 0.0 NA cosmic_spacer
3 nes_beta_diso Q96T58 358 EFKKFGKVTSVQIHG HHHHCCEEEEEEECC c1b-5 __ middle|RRM2_SHARP; middle|RRM; 0.71 NA cosmic_spacer
4 nes_diso Q96T58 400 LFFGMQIEVTAWIGPET CCCCCCCEEECCCCCCC c1cR-4 boundary boundary|RRM2_SHARP; boundary|RRM; boundary|RRM3_SHARP; 0.38 NA cosmic_phi_to_LIVMF
5 nes_diso Q96T58 421 EFRPLDERIDEFHP CCCCCCCCCCCCCC c3-4 boundary boundary|RRM2_SHARP; boundary|RRM; boundary|RRM3_SHARP; boundary|RRM; 0.0 Bad: -23.174 cosmic_phi_to_LIVMF
6 nes_diso Q96T58 428 RIDEFHPKATRTLFIGN CCCCCCCCCCCEEEECC c1c-AT-5 boundary boundary|RRM2_SHARP; boundary|RRM; boundary|RRM3_SHARP; boundary|RRM; 0.12 NA cosmic_spacer
7 nes_ord Q96T58 453 DLRNIFQRFGEIVDIDI HHHHHHHHHCEEEEEEE c1c-5 ORD boundary|RRM3_SHARP; boundary|RRM; 0.25 Medium: -36.959 cosmic_spacer
8 nes_ord Q96T58 453 DLRNIFQRFGEIVD HHHHHHHHHCEEEE c3-4 ORD boundary|RRM3_SHARP; boundary|RRM; 0.0 Weak: -30.601 cosmic_spacer
9 nes_diso Q96T58 485 DIASVCKAIKKMDG CHHHHHHHHHHHCC c3-4 boundary boundary|RRM3_SHARP; boundary|RRM; boundary|RRM4_SHARP; boundary|RRM; 0.0 Weak: -32.404 cosmic_phi_to_LIVMF Weak|
10 nes_diso Q96T58 510 FGKSMPTNCVWLDG CCCCCCCCEEECCC c2-AT-4 boundary boundary|RRM3_SHARP; boundary|RRM; boundary|RRM4_SHARP; boundary|RRM; 0.29 NA
11 nes_diso Q96T58 543 VVKVVFDRLKGMALVL EEEEEEECCCCEEEEE c1a-5 boundary boundary|RRM3_SHARP; boundary|RRM; middle|RRM4_SHARP; middle|RRM; 0.43 Medium: -34.065 cosmic_spacer Medium|
12 nes_diso Q96T58 925 AKSDLSKLESVRMKV CCCCHHHCHHHCCCC c1b-4 DISO 0.0 Bad: -24.764
13 nes_diso Q96T58 1316 RREQMADMAKIKLSVLN CCCCHHHHHHHHHHHCC c1c-AT-4 DISO 0.0 NA cosmic_spacer
14 nes_diso Q96T58 1316 RREQMADMAKIKLSV CCCCHHHHHHHHHHH c1b-4 DISO 0.0 NA cosmic_spacer
15 nes_diso Q96T58 1340 WDSQMKQDAGRFDVSF HHHHCCCCCCCCCCCC c1a-AT-4 DISO 0.0 NA
16 nes_diso Q96T58 1579 PVVLFHSRFMELTR CCEECCCCCCCCCC c3-4 DISO middle|PCM1_C superfamily; 0.14 Medium: -34.96 cosmic_spacer Medium|
17 nes_diso Q96T58 1690 APAPVEQLEQVDLPP CCCCCCCCCCCCCCC c1b-4 DISO boundary|PCM1_C superfamily; 0.0 Medium: -34.633 Medium|
18 nes_diso Q96T58 1824 SKTPVQAAAVSIVE CCCCCCCCCCCCCC c2-AT-4 DISO boundary|Mycoplas_LppA superfamily; 0.0 NA cosmic_spacer
19 nes_diso Q96T58 2592 NNSEIQASEVLVAA CCCCCCCCCCCCCC c2-AT-4 DISO 0.0 NA
20 nes_diso Q96T58 2614 IAPKITSVISRMPVSIDL CCCCCCCCCCCCCCCCCC c4-4 DISO boundary|Collagen_mid superfamily; 0.0 Weak: -31.615 cosmic_spacer Weak|
21 nes_diso Q96T58 2646 TLTGLVSALTGLVNVSL CCCCCCCCCCCCEECCC c1c-5 DISO boundary|Collagen_mid superfamily; 0.0 Medium: -36.701 cosmic_phi_to_LIVMF Medium|
22 nes_diso Q96T58 2646 TLTGLVSALTGLVN CCCCCCCCCCCCEE c3-4 DISO boundary|Collagen_mid superfamily; 0.0 Medium: -37.984 cosmic_phi Medium|
23 nes_diso Q96T58 2689 PVNVLKGPVNVLTGPVNV CCCCCCCCCCCCCCCCCC c4-5 DISO boundary|Collagen_mid superfamily; 0.0 Bad: -25.746 cosmic_phi_to_LIVMF
24 nes_diso Q96T58 2689 PVNVLKGPVNVLTG CCCCCCCCCCCCCC c3-4 DISO boundary|Collagen_mid superfamily; 0.0 Weak: -31.452 cosmic_phi_to_LIVMF Weak|
25 nes_diso Q96T58 2696 PVNVLTGPVNVLTTPVNA CCCCCCCCCCCCCCCCCC c4-5 DISO boundary|Collagen_mid superfamily; 0.0 Bad: -24.622
26 nes_diso Q96T58 2696 PVNVLTGPVNVLTT CCCCCCCCCCCCCC c3-4 DISO boundary|Collagen_mid superfamily; 0.0 Bad: -28.522
27 nes_diso Q96T58 2728 AASAVNATASAVTVTA CCCCCCCCCCCEEECC c1a-AT-4 DISO boundary|Collagen_mid superfamily; 0.0 NA cosmic_spacer
28 nes_diso Q96T58 2749 ASGGVTATTGTVTMAG CCCCCCCCCCCEECCC c1a-AT-4 DISO boundary|Collagen_mid superfamily; 0.0 NA cosmic_spacer
29 nes_diso Q96T58 2802 SGAGLRVNTSEGVVLLS CCCCCEEECCCCEEEEE c1c-AT-4 DISO 0.38 NA cosmic_spacer
30 nes_diso Q96T58 3053 NATVMLAAGIPVPQ CCCEEECCCCCCCC c2-AT-4 DISO 0.43 NA cosmic_spacer
31 nes_diso Q96T58 3165 PVARATAPVQSEVLVMQ CCCCCCCCCCCCCCCCC c1c-AT-5 DISO 0.0 NA cosmic_spacer
32 nes_diso Q96T58 3284 TPPVVVTHGVQIVH CCCCEECCCCEEEC c2-AT-4 DISO 0.29 NA cosmic_spacer
33 nes_diso Q96T58 3511 GLLALKNDTAAVQLHF EEEEECCCCEEEEEEE c1a-AT-5 boundary boundary|SPOC; 0.43 NA cosmic_spacer
34 nes_diso Q96T58 3556 EATQLEGVARRMTVET CHHHHHHHHHHHHCCC c1a-AT-4 DISO middle|SPOC; 0.0 NA cosmic_spacer
35 nes_diso Q96T58 3556 EATQLEGVARRMTVET CHHHHHHHHHHHHCCC c1d-4 DISO middle|SPOC; 0.0 NA cosmic_phi_to_LIVMF
36 nes_diso Q96T58 3563 VARRMTVETDYCLLLAL HHHHHHCCCCEEEEEEE c1c-AT-4 DISO middle|SPOC; 0.25 NA cosmic_spacer
37 nes_diso Q96T58 3642 LAPDLLASISNISPHLMI HCHHHHHHHHHCCCCEEE c4-4 boundary boundary|SPOC; 0.0 Bad: -29.492 cosmic_spacer
38 nes_diso Q96T58 3649 SISNISPHLMIVIA HHHHCCCCEEEEEE c3-4 boundary boundary|SPOC; 0.29 Medium: -37.261 cosmic_spacer Medium|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.