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Q9HCE6_ARGAL | Rho guanine nucleotide exchange factor 10-like protein   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q9HCE6 214 RYARTKRDILALRVGG HHHHHHHHHHHHHHCC c1a-AT-4 DISO 0.0 NA cosmic_spacer
2 nes_diso Q9HCE6 257 GLEKTRMAVMRKVSFLH CCHHHHHHHHCCCCCCC c1c-AT-5 DISO 0.0 NA cosmic_spacer
3 nes_diso Q9HCE6 259 EKTRMAVMRKVSFLH HHHHHHHHCCCCCCC c1b-4 DISO 0.0 NA cosmic_spacer
4 nes_diso Q9HCE6 282 EEEDMGLLEVSVSD CHHHHCCCCCCCCC c2-4 DISO 0.0 Bad: -27.175 cosmic_spacer
5 nes_diso Q9HCE6 285 DMGLLEVSVSDIKP HHCCCCCCCCCCCC c3-4 DISO boundary|RhoGEF; 0.0 Bad: -29.273
6 nes_ord Q9HCE6 359 CQVVFFRVKEILHCHS HHHHHHCHHHHHHHHH c1aR-4 ORD middle|RhoGEF; 0.0 Bad: -28.369 cosmic_spacer
7 nes_ord Q9HCE6 393 IGDLFVASFSKSMVLDV HHHHHHHHCCCCHHHHH c1c-4 ORD middle|RhoGEF; 0.0 Medium: -38.936 cosmic_spacer
8 nes_ord Q9HCE6 394 GDLFVASFSKSMVLDV HHHHHHHCCCCHHHHH c1aR-4 ORD middle|RhoGEF; 0.0 Bad: -24.841 cosmic_spacer
9 nes_diso Q9HCE6 413 YVNNFTSAMSIIKK HHCCHHHHHHHHHH c3-4 boundary middle|RhoGEF; 0.0 Bad: -24.267 cosmic_phi_to_LIVMF
10 nes_diso Q9HCE6 445 SPDRVTLYGLMVKP CCCCEEHHHHHCHH c2-4 boundary middle|RhoGEF; 0.29 Bad: -28.196 cosmic_spacer
11 nes_diso Q9HCE6 451 LYGLMVKPIQRFPQFILL HHHHHCHHHHHCHHHHHH c4-4 boundary middle|RhoGEF; 0.0 Bad: -24.156 cosmic_spacer
12 low complexity Q9HCE6 458 PIQRFPQFILLLQD HHHHCHHHHHHHHH c3-4 boundary middle|RhoGEF; 0.0 Medium: -37.2
13 low complexity Q9HCE6 461 RFPQFILLLQDMLK HCHHHHHHHHHHHH c3-4 boundary middle|RhoGEF; 0.0 Bad: -25.447
14 nes_beta_diso Q9HCE6 559 ERRVFLLNDMLVCA CEEEEEECCEEEEE c2-4 boundary 0.71 Medium: -38.299 cosmic_spacer
15 nes_beta_diso Q9HCE6 604 ALPQVQVVEVGQ CCCCEEEEEECC c2-rev boundary 0.83 NA
16 nes_diso Q9HCE6 655 ELQDLQKDLAVVEQ HHHHHHHHHHHHHH c3-4 DISO 0.0 Weak: -30.235 cosmic_spacer Weak|
17 nes_diso Q9HCE6 665 VVEQITLLISTLHG HHHHHHHHHHHCCC c3-4 DISO 0.0 Bad: -29.15 cosmic_spacer
18 low complexity Q9HCE6 725 SGRPISFMVVFITP CCCCEEEEEEEECC c2-4 boundary 0.86 NA cosmic_spacer
19 nes_diso Q9HCE6 740 PLSKISWVNRLHLAK HHHHHHHHHHHHHHH c1b-5 boundary 0.0 Bad: -23.892 cosmic_spacer
20 nes_diso Q9HCE6 746 WVNRLHLAKIGLRE HHHHHHHHHHHCCH c2-5 boundary 0.0 Bad: -28.164 cosmic_spacer
21 nes_diso Q9HCE6 786 CIPAFSSRALSLQLGA EEECCCCCHHHHEEEC c1a-AT-5 boundary 0.0 NA cosmic_spacer
22 nes_diso Q9HCE6 810 PLLGFSAVSTSLPQGY CCCCCCCCCCCCCCCE c1aR-4 boundary 0.0 Bad: -22.792 cosmic_phi_to_LIVMF
23 nes_diso Q9HCE6 831 GQEGAGGQVEIFSLNR CCCCCCCEEEEEECCC c1a-AT-4 boundary 0.57 NA cosmic_spacer
24 nes_diso Q9HCE6 1039 FHTETLEHLQEINIAT EECCCHHHHHEEEECC c1a-AT-4 boundary 0.14 NA cosmic_spacer
25 nes_diso Q9HCE6 1040 HTETLEHLQEINIAT ECCCHHHHHEEEECC c1b-4 boundary 0.29 NA cosmic_spacer
26 nes_diso Q9HCE6 1046 HLQEINIATRTTFLLPG HHHEEEECCCCCCCCCC c1c-AT-5 boundary 0.38 NA cosmic_spacer
27 nes_diso Q9HCE6 1062 GQKHLCVTSLLICQ CCCCCEEEHHHHHC c2-4 boundary 0.43 Weak: -31.786 Weak|
28 nes_diso Q9HCE6 1074 CQGLLWVGTDQGVIVLL HCCCHHCCCCCCEEEEC c1c-AT-4 boundary 0.0 NA cosmic_spacer
29 nes_beta_diso Q9HCE6 1114 GPVAFLAVATSILAPD CCEEEEEEECCCCCCC c1aR-4 boundary 0.71 NA
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.