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Q9NRL2_BAZ1A | Bromodomain adjacent to zinc finger domain protein 1A   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q9NRL2 421 PPEIFGDALMVLEFLN CHHHHHHHHHHHHHHH c1a-4 boundary boundary|DDT; 0.0 Weak: -31.818 Weak|
2 nes_diso Q9NRL2 427 DALMVLEFLNAFGELF HHHHHHHHHHHHCCCC c1aR-5 boundary boundary|DDT; 0.0 Bad: -25.688 cosmic_spacer
3 nes_diso Q9NRL2 430 MVLEFLNAFGELFDLQD HHHHHHHHHCCCCCCCC c1c-5 boundary boundary|DDT; 0.0 Medium: -33.883 cosmic_phi Medium|
4 nes_diso Q9NRL2 430 MVLEFLNAFGELFD HHHHHHHHHCCCCC c3-4 boundary boundary|DDT; 0.0 Medium: -34.74 cosmic_spacer Medium|
5 nes_diso Q9NRL2 440 ELFDLQDEFPDGVTLEV CCCCCCCCCCCCCCHHH c1cR-4 boundary boundary|DDT; 0.0 Weak: -30.841 cosmic_phi Weak|
6 nes_diso Q9NRL2 450 DGVTLEVLEEALVGND CCCCHHHHHHHHCCCC c1aR-4 boundary boundary|DDT; 0.0 Medium: -34.388 cosmic_spacer Medium|
7 nes_diso Q9NRL2 471 CELLFFFLTAIFQAIA HHHHHHHHHHHHHHHH c1aR-5 boundary boundary|DDT; 0.0 Bad: -29.502
8 nes_diso Q9NRL2 474 LFFFLTAIFQAIAEEE HHHHHHHHHHHHHHHH c1aR-4 boundary boundary|DDT; 0.0 Medium: -33.711 Medium|
9 nes_diso Q9NRL2 474 LFFFLTAIFQAIAE HHHHHHHHHHHHHH c3-4 boundary boundary|DDT; 0.0 Weak: -32.423 Weak|
10 nes_diso Q9NRL2 544 LDSCTLSEILRLHILA CCCCCHHHHHHHHHHH c1a-AT-4 boundary 0.0 NA cosmic_spacer
11 nes_diso Q9NRL2 545 DSCTLSEILRLHILA CCCCHHHHHHHHHHH c1b-4 boundary 0.0 NA cosmic_spacer
12 nes_diso Q9NRL2 616 ILHALCGKLLTLVS HHHHHHHHHHCCHH c3-4 boundary small|WHIM1; boundary|GBP_C superfamily; 0.0 Medium: -35.189 cosmic_spacer Medium|
13 nes_diso Q9NRL2 626 TLVSTRDFIEDYVDILR CCHHHHHHHHHHHHHHH c1c-AT-5 boundary boundary|GBP_C superfamily; 0.0 NA cosmic_spacer
14 low complexity Q9NRL2 816 IFPSIPGLFIEE CCCCCCCEECCC c2-rev boundary boundary|WSD; 0.33 Medium: -34.805
15 nes_diso Q9NRL2 971 AEKQLELRLRDFLLDI HHHHHHHHHHHHHHHH c1a-4 DISO 0.0 Bad: -29.772
16 nes_diso Q9NRL2 973 KQLELRLRDFLLDI HHHHHHHHHHHHHH c2-4 DISO 0.0 Medium: -35.31 Medium|
17 nes_diso Q9NRL2 975 LELRLRDFLLDIEDRI HHHHHHHHHHHHHHHH c1aR-4 DISO 0.0 Bad: -24.698 cosmic_spacer
18 nes_diso Q9NRL2 986 IEDRIYQGTLGAIKVTD HHHHHHHHCCCCCCCCC c1c-AT-4 DISO 0.0 NA cosmic_spacer
19 nes_diso Q9NRL2 1027 IIKTVNEDVEEMEIDE CCCCCCCCHHHHHCHH c1a-5 DISO 0.0 Medium: -38.266 cosmic_phi Medium|
20 nes_diso Q9NRL2 1069 TPQSVSSVVHYLAMAL CCCCCHHHHHHHHHHH c1a-4 DISO 0.0 Bad: -28.62
21 nes_diso Q9NRL2 1076 VVHYLAMALFQIEQ HHHHHHHHHHHHHH c2-5 DISO 0.0 Medium: -34.185 cosmic_spacer Medium|
22 nes_diso Q9NRL2 1076 VVHYLAMALFQIEQ HHHHHHHHHHHHHH c3-4 DISO 0.0 Medium: -33.18 cosmic_spacer Medium|
23 nes_diso Q9NRL2 1080 LAMALFQIEQGIERRF HHHHHHHHHHHHHHHH c1aR-4 __ 0.0 Weak: -32.327 cosmic_phi_to_LIVMF Weak|
24 nes_diso Q9NRL2 1125 SLSQVFLHLSTLDR CHHHHHHHHHHHHH c3-4 boundary 0.0 Bad: -25.173
25 nes_ord Q9NRL2 1129 VFLHLSTLDRSVIWSK HHHHHHHHHHHHHHHH c1aR-4 ORD 0.0 Bad: -26.828 cosmic_spacer
26 nes_diso Q9NRL2 1434 ELSAFEQLVVELVR HHHHHHHHHHHHHC c3-4 boundary boundary|Bromo_Acf1_like; 0.0 Medium: -33.109 cosmic_phi Medium|
27 nes_diso Q9NRL2 1450 DSWPFLKLVSKIQVPD CCHHHCCCCCHHHCCC c1a-4 boundary middle|Bromo_Acf1_like; 0.0 Bad: -25.116 cosmic_spacer
28 nes_diso Q9NRL2 1472 KPIALNIIREKVNKCE CCCCHHHHHHHHHCCC c1aR-4 boundary middle|Bromo_Acf1_like; 0.0 Bad: -21.598 cosmic_spacer
29 nes_diso Q9NRL2 1486 CEYKLASEFIDDIELMF CCCCCHHHHHHHHHHHH c1c-4 boundary middle|Bromo_Acf1_like; 0.0 Bad: -27.688
30 nes_diso Q9NRL2 1514 SEAKAGTRLQAFFHIQA HHHHHHHHHHHHHHHHH c1c-AT-4 boundary boundary|Bromo_Acf1_like; 0.0 NA cosmic_spacer
31 nes_diso Q9NRL2 1522 LQAFFHIQAQKLGLHV HHHHHHHHHHHHCCCC c1a-AT-4 boundary boundary|Bromo_Acf1_like; 0.0 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.