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Q9NZN5_ARHGC | Rho guanine nucleotide exchange factor 12   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q9NZN5 61 SRSEIYGLVQRCVIIQK HHHHHHCCEEEEEEEEC c1c-4 boundary boundary|PDZ; boundary|PDZ_signaling; 0.5 NA cosmic_phi_to_LIVMF
2 nes_diso Q9NZN5 385 LAVFLHHVVSQFDPAT HHHHHHHHHHCCCCHH c1aR-4 boundary middle|RGS_LARG; 0.0 Bad: -23.295 cosmic_phi_to_LIVMF
3 nes_diso Q9NZN5 417 ETRRIFLEFHQFFLDR HHHHHHHHHHHHHHCC c1a-4 boundary middle|RGS_LARG; 0.0 Bad: -28.61 cosmic_phi_to_LIVMF
4 nes_diso Q9NZN5 419 RRIFLEFHQFFLDR HHHHHHHHHHHHCC c2-4 boundary middle|RGS_LARG; 0.0 Bad: -27.262 cosmic_spacer
5 nes_diso Q9NZN5 426 HQFFLDRSAHLKVSVPD HHHHHCCCCCCEEECCH c1c-AT-4 boundary middle|RGS_LARG; 0.12 NA cosmic_spacer
6 nes_diso Q9NZN5 518 CAEQIVAKIEEVLMTA HHHHHHHHHHHHHHHH c1a-4 boundary middle|RGS_LARG; 0.0 Medium: -34.112 cosmic_phi_to_LIVMF Medium|
7 nes_diso Q9NZN5 544 MQYVILMYMKHLGVKV HHHHHHHHHHHHCCCC c1a-4 boundary boundary|RGS_LARG; 0.0 Weak: -31.233 cosmic_phi_to_LIVMF Weak|
8 nes_diso Q9NZN5 546 YVILMYMKHLGVKV HHHHHHHHHHCCCC c2-5 boundary boundary|RGS_LARG; 0.0 Medium: -36.877 cosmic_phi_to_LIVMF Medium|
9 nes_diso Q9NZN5 548 ILMYMKHLGVKVKEPR HHHHHHHHCCCCCCCC c1aR-4 boundary boundary|RGS_LARG; 0.0 Bad: -21.863 cosmic_spacer
10 nes_diso Q9NZN5 699 TLDGTPRTLNTVFDFPP CCCCCCCCCCCCCCCCC c1c-AT-5 DISO 0.0 NA cosmic_spacer
11 nes_diso Q9NZN5 736 TPKPFRKFDSVAFGE CCCCCCCCCCCCCCC c1b-4 DISO 0.0 Bad: -24.707 cosmic_phi
12 nes_diso Q9NZN5 797 YTERAHVRTLKVLD HHHHHHHHHHHHHH c2-AT-4 boundary boundary|RhoGEF; 0.0 NA cosmic_spacer
13 nes_diso Q9NZN5 827 ELRKIFSNLEDILQLHI HHHHHCCCHHHHHHHHH c1c-5 boundary middle|RhoGEF; 0.0 Bad: -28.048 cosmic_phi_to_LIVMF
14 nes_diso Q9NZN5 827 ELRKIFSNLEDILQ HHHHHCCCHHHHHH c3-4 boundary middle|RhoGEF; 0.0 Weak: -32.312 cosmic_phi_to_LIVMF Weak|
15 nes_diso Q9NZN5 831 IFSNLEDILQLHIGLNE HCCCHHHHHHHHHHHHH c1c-5 boundary middle|RhoGEF; 0.0 Medium: -37.868 Medium|
16 nes_diso Q9NZN5 990 YQRRLDTSSLKLSE HHHHHCCHHHHHCC c2-AT-4 boundary boundary|RhoGEF; boundary|PH_LARG; 0.0 NA cosmic_spacer
17 nes_diso Q9NZN5 1003 EYPNVEELRNLDLTK CCCCHHHHHCCCCCC c1b-4 DISO boundary|RhoGEF; boundary|PH_LARG; 0.0 Weak: -32.745 cosmic_spacer Weak|
18 nes_beta_diso Q9NZN5 1032 RDKTIDLYTLLLED CCCCCEEEEEHHHH c2-4 boundary middle|PH_LARG; 0.71 NA cosmic_spacer
19 nes_diso Q9NZN5 1034 KTIDLYTLLLEDILVLL CCCEEEEEHHHHHHHHH c1c-4 boundary middle|PH_LARG; 0.5 NA cosmic_phi_to_LIVMF
20 nes_diso Q9NZN5 1037 DLYTLLLEDILVLL EEEEEHHHHHHHHH c2-5 boundary middle|PH_LARG; 0.29 Bad: -29.967 cosmic_spacer
21 nes_diso Q9NZN5 1039 YTLLLEDILVLLQKQD EEEHHHHHHHHHHHCC c1aR-4 boundary middle|PH_LARG; 0.0 Medium: -36.885 cosmic_spacer Medium|
22 nes_diso Q9NZN5 1076 FSPVIKLSTVLVRQ CCCEEECHHCCCHH c2-4 boundary middle|PH_LARG; 0.43 Bad: -26.754 cosmic_phi
23 nes_diso Q9NZN5 1245 EERWALDALRNLGLLK HHHHHHHHHHHHHHHH c1a-AT-4 DISO 0.0 NA cosmic_spacer
24 nes_diso Q9NZN5 1246 ERWALDALRNLGLLK HHHHHHHHHHHHHHH c1b-4 DISO 0.0 NA cosmic_spacer
25 nes_diso Q9NZN5 1255 NLGLLKQLLVQQLGLTE HHHHHHHHHHHHHCCCC c1c-5 DISO 0.0 Weak: -32.744 cosmic_phi_to_LIVMF Weak|
26 nes_diso Q9NZN5 1258 LLKQLLVQQLGLTE HHHHHHHHHHCCCC c2-5 DISO 0.0 Bad: -29.749 cosmic_phi_to_LIVMF
27 nes_diso Q9NZN5 1350 ASNILVMDHMIMTP CCCCCCCCCCCCCC c2-4 DISO 0.0 Weak: -30.269 Weak|
28 nes_diso Q9NZN5 1425 QESSTDEEVASSLTLQP CCCCCCCCHHHHCCCCC c1c-AT-4 DISO 0.0 NA
29 nes_diso Q9NZN5 1506 YIHKIEADLEHLKK HHHHHHHHHHHHHH c3-4 boundary 0.0 Weak: -30.43 Weak|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.