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Q9UHC6_CNTP2 | Contactin-associated protein-like 2   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_ord Q9UHC6 150 LQHPIIARYVRIVP CCCCCCCEEEEEEE c2-AT-4 ORD boundary|FA58C; 0.43 NA cosmic_spacer
2 nes_ord Q9UHC6 183 YWADVINFDGHVVLPY CCCCEEEECCCEEEEE c1d-4 ORD boundary|FA58C; boundary|LamG; 0.57 NA cosmic_phi_to_LIVMF
3 nes_beta_ord Q9UHC6 201 RNKKMKTLKDVIALNF CCCCCEEEEEEEEEEE c1d-4 ORD boundary|FA58C; boundary|LamG; 0.86 NA cosmic_phi_to_LIVMF
4 nes_beta_ord Q9UHC6 203 KKMKTLKDVIALNFKT CCCEEEEEEEEEEEEC c1a-AT-4 ORD boundary|FA58C; boundary|LamG; 1.0 NA cosmic_spacer
5 nes_beta_ord Q9UHC6 204 KMKTLKDVIALNFKT CCEEEEEEEEEEEEC c1b-5 ORD boundary|FA58C; boundary|LamG; 1.0 NA cosmic_phi_to_LIVMF
6 nes_diso Q9UHC6 297 QHFRTNGEFDYLDLDY EEEEECCCCCCCCCCC c1a-AT-4 boundary middle|LamG; 0.14 NA cosmic_spacer
7 nes_ord Q9UHC6 372 YTVPVFFNATSYLEVPG CCCCCCCCCCCEEECCC c1c-AT-4 ORD boundary|LamG; boundary|LamG; 0.12 NA cosmic_spacer
8 nes_ord Q9UHC6 373 TVPVFFNATSYLEVPG CCCCCCCCCCEEECCC c1a-AT-5 ORD boundary|LamG; boundary|LamG; 0.14 NA cosmic_spacer
9 nes_ord Q9UHC6 386 VPGRLNQDLFSVSFQF CCCCCCCCEEEEEEEE c1a-4 ORD boundary|LamG; 0.43 NA cosmic_spacer
10 nes_ord Q9UHC6 411 VFSHFADNLGNVEIDL EEEECCCCCCEEEEEE c1a-5 ORD middle|LamG; 0.14 Medium: -36.476 cosmic_phi_to_LIVMF
11 nes_beta_ord Q9UHC6 423 EIDLTESKVGVHINITQ EEEEECCEEEEEEEECC c1c-AT-5 ORD middle|LamG; 0.75 NA cosmic_spacer
12 nes_ord Q9UHC6 434 HINITQTKMSQIDISS EEEECCCCEEEEEEEC c1a-AT-5 ORD middle|LamG; 0.43 NA cosmic_spacer
13 nes_beta_ord Q9UHC6 457 QWHEVRFLAKENFAILT CCEEEEEEEECCEEEEE c1c-AT-4 ORD middle|LamG; 0.75 NA cosmic_spacer
14 nes_beta_ord Q9UHC6 461 VRFLAKENFAILTIDG EEEEEECCEEEEEECC c1a-AT-4 ORD middle|LamG; 0.71 NA cosmic_spacer
15 nes_diso Q9UHC6 509 SHSVLQPSFQGCMQLIQ CCCCCCCCCCHHHEEEE c1c-4 boundary boundary|LamG; 0.0 Medium: -33.685 cosmic_phi_to_LIVMF Medium|
16 nes_diso Q9UHC6 513 LQPSFQGCMQLIQVDD CCCCCCHHHEEEEECC c1a-4 boundary boundary|LamG; 0.29 NA cosmic_phi_to_LIVMF
17 nes_beta_diso Q9UHC6 519 GCMQLIQVDDQLVNLY HHHEEEEECCEECCHH c1aR-5 boundary boundary|LamG; 0.71 NA cosmic_phi_to_LIVMF
18 nes_diso Q9UHC6 522 QLIQVDDQLVNLYE EEEEECCEECCHHH c3-4 boundary boundary|LamG; 0.57 NA cosmic_spacer
19 nes_diso Q9UHC6 543 SFANVSIDMCAIID CCCCEEECCCCCCE c3-4 boundary boundary|LamG; 0.43 NA cosmic_phi_to_LIVMF
20 nes_beta_diso Q9UHC6 632 TEDKVWTIVSHDLQMQT CCCEEEEEEEECCCCCE c1c-4 boundary 0.88 NA cosmic_phi_to_LIVMF
21 nes_ord Q9UHC6 761 YKDHLPVSQVVVGD CCCCCCCCEEEEEE c2-4 ORD 0.29 NA cosmic_phi_to_LIVMF
22 nes_ord Q9UHC6 811 HFSTFQGETSADISFYF ECCCCCCCCEEEEEEEE c1c-AT-5 ORD boundary|LamG; 0.38 NA cosmic_spacer
23 nes_ord Q9UHC6 846 IKLELKSATEVSFSFDV EEEEEECCCEEEEEEEC c1c-AT-4 ORD middle|LamG; 0.62 NA cosmic_spacer
24 nes_ord Q9UHC6 894 ASLQVDRLPQQIRKAP EEEEECCCCCEEEECC c1aR-4 ORD middle|LamG; 0.29 Bad: -24.11 cosmic_spacer
25 nes_ord Q9UHC6 910 TEGHTRLELYSQLFVGG CCCCCCCCCCCEEEEEC c1c-AT-4 ORD boundary|LamG; 0.12 NA cosmic_spacer
26 nes_beta_diso Q9UHC6 929 GQQGFLGCIRSLRMNG CCCCCCEEEEEEEECC c1a-4 boundary boundary|LamG; 0.71 NA cosmic_phi_to_LIVMF
27 nes_beta_diso Q9UHC6 936 CIRSLRMNGVTLDL EEEEEEECCEECCH c2-5 boundary boundary|LamG; 0.71 NA cosmic_phi_to_LIVMF
28 nes_diso Q9UHC6 938 RSLRMNGVTLDLEERA EEEEECCEECCHHHHH c1aR-4 boundary boundary|LamG; 0.43 Medium: -33.165 cosmic_phi_to_LIVMF Medium|
29 nes_ord Q9UHC6 1066 YISSFTTDFLAVLVKP EEECCCCCEEEEEECC c1a-5 ORD boundary|Laminin_G_2; 0.43 NA cosmic_phi_to_LIVMF
30 nes_ord Q9UHC6 1074 FLAVLVKPTGSLQIRY EEEEEECCCCEEEEEE c1a-AT-5 ORD boundary|Laminin_G_2; 0.43 NA cosmic_spacer
31 nes_beta_diso Q9UHC6 1171 NTPGFTGCLSRVQFNQ CCCCCEEEEEEEEECC c1a-4 boundary boundary|Laminin_G_2; 0.86 NA cosmic_phi_to_LIVMF
32 nes_TM Q9UHC6 1259 RNSAIIGGVIAVVIFTI HHHHHHHHHHHHHHHHH c1c-4 boundary 0.0 NA cosmic_phi_to_LIVMF
33 nes_TM Q9UHC6 1259 RNSAIIGGVIAVVIFT HHHHHHHHHHHHHHHH c1a-4 boundary 0.0 NA cosmic_phi_to_LIVMF
34 nes_TM Q9UHC6 1260 NSAIIGGVIAVVIFTI HHHHHHHHHHHHHHHH c1a-4 boundary 0.0 NA cosmic_spacer
35 nes_TM Q9UHC6 1264 IGGVIAVVIFTILC HHHHHHHHHHHHHH c2-4 boundary 0.0 NA cosmic_spacer
36 low complexity Q9UHC6 1267 VIAVVIFTILCTLVFLI HHHHHHHHHHHHHHHHH c1c-5 boundary 0.0 NA
37 low complexity Q9UHC6 1268 IAVVIFTILCTLVFLIR HHHHHHHHHHHHHHHHH c1c-4 boundary 0.0 NA
38 nes_TM Q9UHC6 1268 IAVVIFTILCTLVFLI HHHHHHHHHHHHHHHH c1a-4 boundary 0.0 NA
39 low complexity Q9UHC6 1269 AVVIFTILCTLVFLIR HHHHHHHHHHHHHHHH c1aR-5 boundary 0.0 NA cosmic_spacer
40 low complexity Q9UHC6 1271 VIFTILCTLVFLIR HHHHHHHHHHHHHH c3-4 boundary 0.0 NA
41 low complexity Q9UHC6 1272 IFTILCTLVFLIRY HHHHHHHHHHHHHH c3-4 boundary 0.0 NA cosmic_spacer
42 nes_TM Q9UHC6 1275 ILCTLVFLIRYMFR HHHHHHHHHHHHHH c3-4 boundary 0.0 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.